Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:25343880-28273909

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845 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Megf8 7 25317164 to 25365917 48753 + protein coding gene multiple EGF-like-domains 8
Cpgi18597 7 25363187 to 25363348 161 CpG island CpG island 18597
Cnfn 7 25367620 to 25369724 2104 - protein coding gene cornifelin
Tssr71224 7 25367650 to 25367670 20 - TSS region transcription start site region 71224
Tssr71225 7 25367675 to 25367684 9 - TSS region transcription start site region 71225
Tssr71226 7 25367692 to 25367703 11 - TSS region transcription start site region 71226
Cpgi18598 7 25367806 to 25368555 749 CpG island CpG island 18598
Tssr71227 7 25368081 to 25368096 15 - TSS region transcription start site region 71227
Tssr71228 7 25369048 to 25369115 67 - TSS region transcription start site region 71228
Tssr71229 7 25369712 to 25369730 18 - TSS region transcription start site region 71229
Cpgi18599 7 25376697 to 25376863 166 CpG island CpG island 18599
4732471J01Rik 7 25376819 to 25566417 189598 + antisense lncRNA gene RIKEN cDNA 4732471J01 gene
Lipe 7 25379527 to 25398486 18959 - protein coding gene lipase, hormone sensitive
Cpgi18600 7 25379743 to 25380237 494 CpG island CpG island 18600
Tssr71230 7 25384951 to 25384958 7 - TSS region transcription start site region 71230
Tssr71231 7 25384961 to 25384972 11 - TSS region transcription start site region 71231
Tssr71232 7 25388399 to 25388424 25 - TSS region transcription start site region 71232
Gm38968 7 25388635 to 25389558 923 + lncRNA gene predicted gene, 38968
Tssr71233 7 25388971 to 25388984 13 - TSS region transcription start site region 71233
Tssr71234 7 25388986 to 25389002 16 - TSS region transcription start site region 71234
Tssr71235 7 25389012 to 25389030 18 - TSS region transcription start site region 71235
Tssr71236 7 25390098 to 25390124 26 - TSS region transcription start site region 71236
Tssr2142 7 25390125 to 25390128 3 - TSS region transcription start site region 2142
Tssr71237 7 25390128 to 25390131 3 - TSS region transcription start site region 71237
Tssr65123 7 25392270 to 25392279 9 + TSS region transcription start site region 65123
Tssr65124 7 25394287 to 25394307 20 + TSS region transcription start site region 65124
Cpgi18601 7 25395253 to 25395805 552 CpG island CpG island 18601
Tssr71238 7 25395533 to 25395538 5 - TSS region transcription start site region 71238
Tssr71239 7 25395579 to 25395587 8 - TSS region transcription start site region 71239
Tssr71240 7 25395610 to 25395695 85 - TSS region transcription start site region 71240
Cpgi18602 7 25395983 to 25396467 484 CpG island CpG island 18602
Tssr65125 7 25396177 to 25396193 16 + TSS region transcription start site region 65125
Tssr65126 7 25396446 to 25396485 39 + TSS region transcription start site region 65126
Cpgi18603 7 25396742 to 25396915 173 CpG island CpG island 18603
Tssr71241 7 25398697 to 25398719 22 - TSS region transcription start site region 71241
Cxcl17 7 25400053 to 25412886 12833 - protein coding gene chemokine (C-X-C motif) ligand 17
Tssr71242 7 25400261 to 25400298 37 - TSS region transcription start site region 71242
Tssr2143 7 25412797 to 25412802 5 - TSS region transcription start site region 2143
Tssr71243 7 25412807 to 25412816 9 - TSS region transcription start site region 71243
Tssr71244 7 25412832 to 25412841 9 - TSS region transcription start site region 71244
Tssr71245 7 25412845 to 25412856 11 - TSS region transcription start site region 71245
Tssr71246 7 25412857 to 25412885 28 - TSS region transcription start site region 71246
Tssr71247 7 25412902 to 25412913 11 - TSS region transcription start site region 71247
Tssr2144 7 25412947 to 25412950 3 - TSS region transcription start site region 2144
Tssr2145 7 25412965 to 25412974 9 - TSS region transcription start site region 2145
Tssr2146 7 25412983 to 25412987 4 - TSS region transcription start site region 2146
Tssr2147 7 25413026 to 25413032 6 - TSS region transcription start site region 2147
Gm5587 7 25419153 to 25419826 673 - pseudogene predicted gene 5587
Gm20949 7 25421841 to 25422792 951 - pseudogene predicted gene, 20949
Cpgi18604 7 25422719 to 25423150 431 CpG island CpG island 18604
Tssr2148 7 25427409 to 25427420 11 + TSS region transcription start site region 2148
Tssr65127 7 25431729 to 25431734 5 + TSS region transcription start site region 65127
Tssr65128 7 25433677 to 25433688 11 + TSS region transcription start site region 65128
Gm15495 7 25442155 to 25443463 1308 - pseudogene predicted gene 15495
Tssr65129 7 25452089 to 25452118 29 + TSS region transcription start site region 65129
Ceacam1 7 25461707 to 25477603 15896 - protein coding gene carcinoembryonic antigen-related cell adhesion molecule 1
Tssr65130 7 25463447 to 25463470 23 + TSS region transcription start site region 65130
Tssr71248 7 25463482 to 25463517 35 - TSS region transcription start site region 71248
D7Mit23a 7 25463525 to 25463757 232 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 23a
Tssr65131 7 25463652 to 25463666 14 + TSS region transcription start site region 65131
Tssr65132 7 25463676 to 25463698 22 + TSS region transcription start site region 65132
Tssr71249 7 25463700 to 25463718 18 - TSS region transcription start site region 71249
Tssr71250 7 25463719 to 25463729 10 - TSS region transcription start site region 71250
Tssr71251 7 25464265 to 25464268 3 - TSS region transcription start site region 71251
Tssr71252 7 25466345 to 25466356 11 - TSS region transcription start site region 71252
Tssr71253 7 25466357 to 25466383 26 - TSS region transcription start site region 71253
Tssr71254 7 25466399 to 25466422 23 - TSS region transcription start site region 71254
Tssr71255 7 25471822 to 25471828 6 - TSS region transcription start site region 71255
Tssr65133 7 25471878 to 25471891 13 + TSS region transcription start site region 65133
Tssr71256 7 25471920 to 25471971 51 - TSS region transcription start site region 71256
Tssr71257 7 25471973 to 25471997 24 - TSS region transcription start site region 71257
Tssr65134 7 25471980 to 25471987 7 + TSS region transcription start site region 65134
Tssr71258 7 25472020 to 25472023 3 - TSS region transcription start site region 71258
Tssr65135 7 25474747 to 25474773 26 + TSS region transcription start site region 65135
Tssr65136 7 25476385 to 25476402 17 + TSS region transcription start site region 65136
Tssr71259 7 25476406 to 25476426 20 - TSS region transcription start site region 71259
Tssr71260 7 25476483 to 25476500 17 - TSS region transcription start site region 71260
Tssr71261 7 25476552 to 25476563 11 - TSS region transcription start site region 71261
Tssr71262 7 25476566 to 25476590 24 - TSS region transcription start site region 71262
Tssr71263 7 25476642 to 25476654 12 - TSS region transcription start site region 71263
Tssr71264 7 25476696 to 25476701 5 - TSS region transcription start site region 71264
Tssr71265 7 25477582 to 25477594 12 - TSS region transcription start site region 71265
Tssr71266 7 25477597 to 25477602 5 - TSS region transcription start site region 71266
Tssr71267 7 25477607 to 25477634 27 - TSS region transcription start site region 71267
Gm38967 7 25483186 to 25486853 3667 - lncRNA gene predicted gene, 38967
Ceacam2 7 25516042 to 25539857 23815 - protein coding gene carcinoembryonic antigen-related cell adhesion molecule 2
Tssr2149 7 25517677 to 25517687 10 - TSS region transcription start site region 2149
D7Mit23b 7 25517826 to 25518042 216 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 23b
D7Dcr2 7 25517906 to 25518003 97 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 2
Tssr71268 7 25537070 to 25537086 16 - TSS region transcription start site region 71268
Tssr71269 7 25539804 to 25539815 11 - TSS region transcription start site region 71269
Tssr71270 7 25539822 to 25539829 7 - TSS region transcription start site region 71270
Tssr71271 7 25539845 to 25539858 13 - TSS region transcription start site region 71271
Tssr71272 7 25539915 to 25539933 18 - TSS region transcription start site region 71272
Tssr71273 7 25539950 to 25539955 5 - TSS region transcription start site region 71273
Gm29918 7 25577074 to 25577798 724 - lincRNA gene predicted gene, 29918
Gm38569 7 25584224 to 25594776 10552 + lincRNA gene predicted gene, 38569
Tssr65137 7 25601285 to 25601294 9 + TSS region transcription start site region 65137
Gm4607 7 25601326 to 25601902 576 + pseudogene predicted gene 4607
Cpgi18605 7 25601375 to 25601546 171 CpG island CpG island 18605
Erich4 7 25614621 to 25615892 1271 - protein coding gene glutamate rich 4
Tssr71274 7 25615807 to 25615814 7 - TSS region transcription start site region 71274
Tssr71275 7 25615835 to 25615859 24 - TSS region transcription start site region 71275
Tssr71276 7 25615874 to 25615886 12 - TSS region transcription start site region 71276
D7Mit113 7 25616709 to 25616885 176 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 113
Gm38969 7 25618668 to 25619524 856 - lncRNA gene predicted gene, 38969
Cpgi18606 7 25619059 to 25619761 702 CpG island CpG island 18606
Tssr65138 7 25619404 to 25619446 42 + TSS region transcription start site region 65138
Dmac2 7 25619414 to 25625550 6136 + protein coding gene distal membrane arm assembly complex 2
Tssr65139 7 25627154 to 25627168 14 + TSS region transcription start site region 65139
Tssr65140 7 25627181 to 25627196 15 + TSS region transcription start site region 65140
Cpgi18607 7 25627335 to 25627540 205 CpG island CpG island 18607
B3gnt8 7 25627588 to 25629492 1904 + protein coding gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8
Tssr65141 7 25627604 to 25627652 48 + TSS region transcription start site region 65141
Bckdha 7 25629852 to 25658785 28933 - protein coding gene branched chain ketoacid dehydrogenase E1, alpha polypeptide
Cpgi18608 7 25633163 to 25633384 221 CpG island CpG island 18608
Tssr65142 7 25644897 to 25644900 3 + TSS region transcription start site region 65142
B230201I24Rik 7 25650482 to 25651138 656 unclassified gene RIKEN cDNA B230201I24 gene
Tssr71277 7 25651333 to 25651375 42 - TSS region transcription start site region 71277
Tssr71278 7 25655847 to 25655851 4 - TSS region transcription start site region 71278
Cpgi18609 7 25658629 to 25659485 856 CpG island CpG island 18609
Tssr71279 7 25658726 to 25658761 35 - TSS region transcription start site region 71279
Tssr65143 7 25659148 to 25659157 9 + TSS region transcription start site region 65143
Exosc5 7 25659153 to 25668032 8879 + protein coding gene exosome component 5
Tssr65144 7 25659164 to 25659236 72 + TSS region transcription start site region 65144
Tssr65145 7 25659401 to 25659409 8 + TSS region transcription start site region 65145
Tssr65146 7 25659424 to 25659446 22 + TSS region transcription start site region 65146
Tssr65147 7 25659450 to 25659461 11 + TSS region transcription start site region 65147
Tmem91 7 25669139 to 25675166 6027 - protein coding gene transmembrane protein 91
Tssr65148 7 25670443 to 25670448 5 + TSS region transcription start site region 65148
Cpgi18610 7 25674591 to 25675239 648 CpG island CpG island 18610
Tssr71280 7 25675100 to 25675187 87 - TSS region transcription start site region 71280
D7Mit265 7 25678573 to 25678697 124 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 265
Tssr71281 7 25679061 to 25679108 47 - TSS region transcription start site region 71281
Cpgi18611 7 25680556 to 25681152 596 CpG island CpG island 18611
Tssr65149 7 25680780 to 25680834 54 + TSS region transcription start site region 65149
B9d2 7 25680780 to 25686558 5778 + protein coding gene B9 protein domain 2
Tssr65150 7 25680842 to 25680861 19 + TSS region transcription start site region 65150
Tssr71282 7 25681018 to 25681034 16 - TSS region transcription start site region 71282
Tssr65151 7 25681177 to 25681191 14 + TSS region transcription start site region 65151
Cpgi18612 7 25686113 to 25688296 2183 CpG island CpG island 18612
Tssr65152 7 25686994 to 25687012 18 + TSS region transcription start site region 65152
Skts14 7 25687002 to 25705077 18075 QTL skin tumor susceptibility 14
Tgfb1 7 25687002 to 25705077 18075 + protein coding gene transforming growth factor, beta 1
Tssr65153 7 25687125 to 25687136 11 + TSS region transcription start site region 65153
Tssr71283 7 25687264 to 25687279 15 - TSS region transcription start site region 71283
Tssr65154 7 25687277 to 25687341 64 + TSS region transcription start site region 65154
Tssr65155 7 25687365 to 25687377 12 + TSS region transcription start site region 65155
Tssr65156 7 25687481 to 25687540 59 + TSS region transcription start site region 65156
Tssr71284 7 25687537 to 25687573 36 - TSS region transcription start site region 71284
Tssr65157 7 25687541 to 25687569 28 + TSS region transcription start site region 65157
Tssr65158 7 25687571 to 25687583 12 + TSS region transcription start site region 65158
Tssr65159 7 25687637 to 25687648 11 + TSS region transcription start site region 65159
Tssr65160 7 25687838 to 25687882 44 + TSS region transcription start site region 65160
Tssr65161 7 25688094 to 25688123 29 + TSS region transcription start site region 65161
Tssr65162 7 25688129 to 25688148 19 + TSS region transcription start site region 65162
Cpgi18613 7 25688604 to 25689688 1084 CpG island CpG island 18613
Tssr71285 7 25689100 to 25689109 9 - TSS region transcription start site region 71285
Tssr71286 7 25689120 to 25689141 21 - TSS region transcription start site region 71286
Tssr71287 7 25689148 to 25689169 21 - TSS region transcription start site region 71287
Tssr65163 7 25694238 to 25694253 15 + TSS region transcription start site region 65163
Tssr65164 7 25697191 to 25697206 15 + TSS region transcription start site region 65164
Tssr65165 7 25704170 to 25704223 53 + TSS region transcription start site region 65165
Cpgi18614 7 25704714 to 25705193 479 CpG island CpG island 18614
Tssr65166 7 25704777 to 25704802 25 + TSS region transcription start site region 65166
Tssr65167 7 25704809 to 25704833 24 + TSS region transcription start site region 65167
Ccdc97 7 25711106 to 25719088 7982 - protein coding gene coiled-coil domain containing 97
Tssr71288 7 25712133 to 25712147 14 - TSS region transcription start site region 71288
Tssr71289 7 25712558 to 25712569 11 - TSS region transcription start site region 71289
Tssr71290 7 25718684 to 25718723 39 - TSS region transcription start site region 71290
Tssr71291 7 25718801 to 25718815 14 - TSS region transcription start site region 71291
Cpgi18615 7 25718848 to 25719253 405 CpG island CpG island 18615
Tssr71292 7 25718976 to 25719062 86 - TSS region transcription start site region 71292
Tssr65168 7 25719178 to 25719181 3 + TSS region transcription start site region 65168
Hnrnpul1 7 25721165 to 25754757 33592 - protein coding gene heterogeneous nuclear ribonucleoprotein U-like 1
Tssr71293 7 25721718 to 25721728 10 - TSS region transcription start site region 71293
Tssr71294 7 25722856 to 25722878 22 - TSS region transcription start site region 71294
Tssr65169 7 25722885 to 25722897 12 + TSS region transcription start site region 65169
Tssr71295 7 25722925 to 25722956 31 - TSS region transcription start site region 71295
Tssr71296 7 25724733 to 25724835 102 - TSS region transcription start site region 71296
Tssr71297 7 25726014 to 25726049 35 - TSS region transcription start site region 71297
Tssr71298 7 25733092 to 25733112 20 - TSS region transcription start site region 71298
Tssr71299 7 25736955 to 25736960 5 - TSS region transcription start site region 71299
Tssr71300 7 25745230 to 25745242 12 - TSS region transcription start site region 71300
Tssr71301 7 25748423 to 25748458 35 - TSS region transcription start site region 71301
D7Mit307 7 25752242 to 25752347 105 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 307
Cpgi18616 7 25753949 to 25755333 1384 CpG island CpG island 18616
Tssr71302 7 25754566 to 25754577 11 - TSS region transcription start site region 71302
Tssr71303 7 25754629 to 25754640 11 - TSS region transcription start site region 71303
Tssr71304 7 25754681 to 25754692 11 - TSS region transcription start site region 71304
Tssr71305 7 25754706 to 25754750 44 - TSS region transcription start site region 71305
Tssr71306 7 25754752 to 25754771 19 - TSS region transcription start site region 71306
Tssr71307 7 25754801 to 25754810 9 - TSS region transcription start site region 71307
Tssr65170 7 25754895 to 25754933 38 + TSS region transcription start site region 65170
Tssr71308 7 25754952 to 25754963 11 - TSS region transcription start site region 71308
Tssr71309 7 25755110 to 25755160 50 - TSS region transcription start site region 71309
Tssr71310 7 25755203 to 25755214 11 - TSS region transcription start site region 71310
Tssr71311 7 25755256 to 25755276 20 - TSS region transcription start site region 71311
Tssr65171 7 25755471 to 25755474 3 + TSS region transcription start site region 65171
Cpgi18617 7 25755671 to 25756245 574 CpG island CpG island 18617