Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:25178723-25280264

54 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pou2f2	7	25091114 to 25179993	88879	-	protein coding gene	POU domain, class 2, transcription factor 2
Cpgi18580	7	25178717 to 25180145	1428		CpG island	CpG island 18580
Tssr71192	7	25179773 to 25179786	13	-	TSS region	transcription start site region 71192
Tssr71193	7	25179857 to 25179896	39	-	TSS region	transcription start site region 71193
Lrdm1	7	25179993 to 3303532	-21876461		QTL	lymphoproliferation (Fas) renal disease modifier 1
Cpgi18581	7	25181140 to 25181321	181		CpG island	CpG island 18581
Cpgi18582	7	25181649 to 25182235	586		CpG island	CpG island 18582
Dedd2	7	25202838 to 25219873	17035	-	protein coding gene	death effector domain-containing DNA binding protein 2
Tssr71194	7	25205444 to 25205455	11	-	TSS region	transcription start site region 71194
Tssr71195	7	25205952 to 25205962	10	-	TSS region	transcription start site region 71195
Tssr65095	7	25206120 to 25206130	10	+	TSS region	transcription start site region 65095
Tssr71196	7	25206527 to 25206538	11	-	TSS region	transcription start site region 71196
Mir7048	7	25217668 to 25217725	57	-	miRNA gene	microRNA 7048
Cpgi18583	7	25218705 to 25220222	1517		CpG island	CpG island 18583
Tssr65096	7	25218914 to 25218924	10	+	TSS region	transcription start site region 65096
Tssr65097	7	25219340 to 25219378	38	+	TSS region	transcription start site region 65097
4933430L12Rik	7	25219368 to 25220930	1562	+	antisense lncRNA gene	RIKEN cDNA 4933430L12 gene
Tssr71197	7	25219823 to 25219880	57	-	TSS region	transcription start site region 71197
Cpgi18584	7	25221021 to 25221869	848		CpG island	CpG island 18584
Tssr65098	7	25221417 to 25221469	52	+	TSS region	transcription start site region 65098
Zfp526	7	25221425 to 25227507	6082	+	protein coding gene	zinc finger protein 526
Gsk3a	7	25228258 to 25237851	9593	-	protein coding gene	glycogen synthase kinase 3 alpha
9130221H12Rik	7	25228723 to 25230264	1541	+	antisense lncRNA gene	RIKEN cDNA 9130221H12 gene
Tssr71198	7	25229560 to 25229575	15	-	TSS region	transcription start site region 71198
Tssr71199	7	25230949 to 25230956	7	-	TSS region	transcription start site region 71199
Cpgi18585	7	25237077 to 25238412	1335		CpG island	CpG island 18585
Tssr71200	7	25237719 to 25237730	11	-	TSS region	transcription start site region 71200
Tssr71201	7	25237740 to 25237828	88	-	TSS region	transcription start site region 71201
Tssr71202	7	25237849 to 25237856	7	-	TSS region	transcription start site region 71202
Tssr71203	7	25237866 to 25237877	11	-	TSS region	transcription start site region 71203
Cpgi18586	7	25239153 to 25239509	356		CpG island	CpG island 18586
Erf	7	25242560 to 25250758	8198	-	protein coding gene	Ets2 repressor factor
Tssr71204	7	25245000 to 25245015	15	-	TSS region	transcription start site region 71204
Tssr71205	7	25245107 to 25245144	37	-	TSS region	transcription start site region 71205
Tssr71206	7	25245176 to 25245207	31	-	TSS region	transcription start site region 71206
Tssr71207	7	25245440 to 25245453	13	-	TSS region	transcription start site region 71207
Tssr71208	7	25245467 to 25245481	14	-	TSS region	transcription start site region 71208
Tssr71209	7	25245519 to 25245532	13	-	TSS region	transcription start site region 71209
Tssr71210	7	25245707 to 25245710	3	-	TSS region	transcription start site region 71210
Tssr71211	7	25248424 to 25248465	41	-	TSS region	transcription start site region 71211
Cpgi18587	7	25248910 to 25251222	2312		CpG island	CpG island 18587
Tssr71212	7	25250720 to 25250738	18	-	TSS region	transcription start site region 71212
Tssr71213	7	25250871 to 25250881	10	-	TSS region	transcription start site region 71213
Cpgi18588	7	25251245 to 25251415	170		CpG island	CpG island 18588
Cpgi18589	7	25267178 to 25268616	1438		CpG island	CpG island 18589
Tssr71214	7	25267408 to 25267421	13	-	TSS region	transcription start site region 71214
Tssr65099	7	25267669 to 25267723	54	+	TSS region	transcription start site region 65099
Cic	7	25267704 to 25294159	26455	+	protein coding gene	capicua transcriptional repressor
Gm45974	7	25267755 to 25270827	3072	-	lncRNA gene	predicted gene, 45974
Tssr65100	7	25268394 to 25268420	26	+	TSS region	transcription start site region 65100
Tssr65101	7	25268440 to 25268454	14	+	TSS region	transcription start site region 65101
Cpgi18590	7	25278312 to 25279836	1524		CpG island	CpG island 18590
Tssr71215	7	25278753 to 25278763	10	-	TSS region	transcription start site region 71215
Tssr65102	7	25279619 to 25279649	30	+	TSS region	transcription start site region 65102