Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:19578669-19678675

42 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Zfp296	7	19577287 to 19580656	3369	+	protein coding gene	zinc finger protein 296
Clasrp	7	19581035 to 19604486	23451	-	protein coding gene	CLK4-associating serine/arginine rich protein
Tssr70939	7	19584354 to 19584364	10	-	TSS region	transcription start site region 70939
Cpgi18502	7	19585954 to 19587020	1066		CpG island	CpG island 18502
Tssr70940	7	19586417 to 19586430	13	-	TSS region	transcription start site region 70940
Tssr70941	7	19586449 to 19586462	13	-	TSS region	transcription start site region 70941
Tssr70942	7	19592795 to 19592801	6	-	TSS region	transcription start site region 70942
Tssr70943	7	19592810 to 19592829	19	-	TSS region	transcription start site region 70943
Gm26890	7	19597293 to 19602294	5001	-	lincRNA gene	predicted gene, 26890
Cpgi18503	7	19603879 to 19604685	806		CpG island	CpG island 18503
Tssr70944	7	19604427 to 19604438	11	-	TSS region	transcription start site region 70944
Tssr70945	7	19604444 to 19604492	48	-	TSS region	transcription start site region 70945
Relb	7	19606217 to 19629438	23221	-	protein coding gene	avian reticuloendotheliosis viral (v-rel) oncogene related B
Cpgi18504	7	19619415 to 19620072	657		CpG island	CpG island 18504
Tssr70946	7	19622381 to 19622397	16	-	TSS region	transcription start site region 70946
Cpgi18505	7	19628375 to 19629956	1581		CpG island	CpG island 18505
Tssr70947	7	19628403 to 19628429	26	-	TSS region	transcription start site region 70947
Tssr70948	7	19628669 to 19628675	6	-	TSS region	transcription start site region 70948
Tssr64873	7	19628978 to 19628998	20	+	TSS region	transcription start site region 64873
Tssr70949	7	19629355 to 19629451	96	-	TSS region	transcription start site region 70949
Clptm1	7	19631580 to 19665030	33450	-	protein coding gene	cleft lip and palate associated transmembrane protein 1
Tssr70950	7	19635798 to 19635820	22	-	TSS region	transcription start site region 70950
Tssr70951	7	19643089 to 19643122	33	-	TSS region	transcription start site region 70951
6430500G05Rik	7	19652635 to 19653869	1234		unclassified gene	RIKEN cDNA 6430500G05 gene
Cpgi18506	7	19664191 to 19665823	1632		CpG island	CpG island 18506
Tssr70952	7	19665005 to 19665028	23	-	TSS region	transcription start site region 70952
Tssr64874	7	19665449 to 19665482	33	+	TSS region	transcription start site region 64874
Apoc2	7	19671579 to 19677941	6362	-	protein coding gene	apolipoprotein C-II
Gm44805	7	19671584 to 19681423	9839	-	protein coding gene	predicted gene 44805
Tssr70953	7	19671693 to 19671703	10	-	TSS region	transcription start site region 70953
Tssr70954	7	19671789 to 19671828	39	-	TSS region	transcription start site region 70954
Tssr70955	7	19671829 to 19671850	21	-	TSS region	transcription start site region 70955
Tssr64875	7	19673222 to 19673254	32	+	TSS region	transcription start site region 64875
Tssr70956	7	19673588 to 19673600	12	-	TSS region	transcription start site region 70956
Tssr70957	7	19675900 to 19676005	105	-	TSS region	transcription start site region 70957
Tssr70958	7	19676749 to 19676767	18	-	TSS region	transcription start site region 70958
Tssr70959	7	19676782 to 19676800	18	-	TSS region	transcription start site region 70959
Tssr70960	7	19676824 to 19676866	42	-	TSS region	transcription start site region 70960
Tssr70961	7	19677020 to 19677032	12	-	TSS region	transcription start site region 70961
Tssr70962	7	19677947 to 19677952	5	-	TSS region	transcription start site region 70962
Apoc4	7	19678084 to 19681460	3376	-	protein coding gene	apolipoprotein C-IV
Tssr64876	7	19678179 to 19678210	31	+	TSS region	transcription start site region 64876