Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:19400080-19590313

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97 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Klc3 7 19394437 to 19404104 9667 - protein coding gene kinesin light chain 3
Cpgi18482 7 19399857 to 19400191 334 CpG island CpG island 18482
Cpgi18483 7 19403547 to 19404424 877 CpG island CpG island 18483
Tssr70913 7 19403790 to 19403818 28 - TSS region transcription start site region 70913
Tssr64845 7 19403909 to 19403924 15 + TSS region transcription start site region 64845
Tssr70914 7 19404082 to 19404130 48 - TSS region transcription start site region 70914
Cpgi18484 7 19405443 to 19405725 282 CpG island CpG island 18484
Gm38954 7 19405689 to 19408309 2620 + lncRNA gene predicted gene, 38954
Tssr64846 7 19411086 to 19411101 15 + TSS region transcription start site region 64846
Ckm 7 19411094 to 19421583 10489 + protein coding gene creatine kinase, muscle
D7Nds6 7 19413473 to 19413596 123 DNA segment DNA segment, Chr 7, Nuffield Department of Surgery 6
Tssr64847 7 19414110 to 19414161 51 + TSS region transcription start site region 64847
Tssr64848 7 19414164 to 19414171 7 + TSS region transcription start site region 64848
Tssr64849 7 19414187 to 19414199 12 + TSS region transcription start site region 64849
Tssr64850 7 19414225 to 19414255 30 + TSS region transcription start site region 64850
Tssr64851 7 19414885 to 19414896 11 + TSS region transcription start site region 64851
Tssr64852 7 19414931 to 19414949 18 + TSS region transcription start site region 64852
Tssr2110 7 19414962 to 19414977 15 + TSS region transcription start site region 2110
Tssr70915 7 19414967 to 19414974 7 - TSS region transcription start site region 70915
Tssr64853 7 19414983 to 19415008 25 + TSS region transcription start site region 64853
Tssr70916 7 19415016 to 19415057 41 - TSS region transcription start site region 70916
Cpgi18485 7 19415344 to 19415620 276 CpG island CpG island 18485
Tssr64854 7 19415399 to 19415424 25 + TSS region transcription start site region 64854
Tssr64855 7 19415462 to 19415476 14 + TSS region transcription start site region 64855
Tssr64856 7 19416734 to 19416760 26 + TSS region transcription start site region 64856
A930016O22Rik 7 19417466 to 19421417 3951 - antisense lncRNA gene RIKEN cDNA A930016O22 gene
Cpgi18486 7 19419844 to 19420354 510 CpG island CpG island 18486
Tssr64857 7 19420157 to 19420171 14 + TSS region transcription start site region 64857
Cpgi18487 7 19421008 to 19421689 681 CpG island CpG island 18487
Tssr70917 7 19421326 to 19421351 25 - TSS region transcription start site region 70917
Mark4 7 19425102 to 19458797 33695 - protein coding gene MAP/microtubule affinity regulating kinase 4
Cpgi18488 7 19426102 to 19426264 162 CpG island CpG island 18488
Cpgi18489 7 19457765 to 19459073 1308 CpG island CpG island 18489
Tssr70918 7 19458672 to 19458685 13 - TSS region transcription start site region 70918
Tssr70919 7 19458728 to 19458739 11 - TSS region transcription start site region 70919
Tssr70920 7 19458748 to 19458776 28 - TSS region transcription start site region 70920
Tssr70921 7 19458779 to 19458800 21 - TSS region transcription start site region 70921
Tssr70922 7 19458801 to 19458856 55 - TSS region transcription start site region 70922
Tssr64858 7 19458930 to 19458935 5 + TSS region transcription start site region 64858
Tssr70923 7 19459235 to 19459253 18 - TSS region transcription start site region 70923
Gm23099 7 19460797 to 19460935 138 - snRNA gene predicted gene, 23099
Tssr64859 7 19463267 to 19463292 25 + TSS region transcription start site region 64859
Tssr64860 7 19463293 to 19463308 15 + TSS region transcription start site region 64860
Exoc3l2 7 19463331 to 19496762 33431 + protein coding gene exocyst complex component 3-like 2
Gm45167 7 19468228 to 19468549 321 + pseudogene predicted gene 45167
Cpgi18490 7 19469399 to 19470118 719 CpG island CpG island 18490
Cpgi18491 7 19473602 to 19474751 1149 CpG island CpG island 18491
Tssr64861 7 19489045 to 19489067 22 + TSS region transcription start site region 64861
Tssr64862 7 19489083 to 19489094 11 + TSS region transcription start site region 64862
Cpgi18492 7 19489258 to 19489946 688 CpG island CpG island 18492
Cpgi18493 7 19491726 to 19492200 474 CpG island CpG island 18493
Cpgi18494 7 19495080 to 19495313 233 CpG island CpG island 18494
Bloc1s3 7 19505783 to 19508358 2575 - protein coding gene biogenesis of lysosomal organelles complex-1, subunit 3
Tssr70924 7 19506686 to 19506694 8 - TSS region transcription start site region 70924
Cpgi18495 7 19506858 to 19509132 2274 CpG island CpG island 18495
Tssr64863 7 19507320 to 19507360 40 + TSS region transcription start site region 64863
Tssr70925 7 19508292 to 19508304 12 - TSS region transcription start site region 70925
Tssr70926 7 19508321 to 19508377 56 - TSS region transcription start site region 70926
Tssr70927 7 19508380 to 19508389 9 - TSS region transcription start site region 70927
Tssr64864 7 19508714 to 19508741 27 + TSS region transcription start site region 64864
Trappc6a 7 19508729 to 19516145 7416 + protein coding gene trafficking protein particle complex 6A
Tssr64865 7 19508743 to 19508754 11 + TSS region transcription start site region 64865
Tssr64866 7 19508760 to 19508771 11 + TSS region transcription start site region 64866
Tssr64867 7 19514518 to 19514542 24 + TSS region transcription start site region 64867
Tssr64868 7 19517620 to 19517631 11 + TSS region transcription start site region 64868
Tssr64869 7 19517716 to 19517730 14 + TSS region transcription start site region 64869
Tssr2111 7 19517740 to 19517749 9 + TSS region transcription start site region 2111
Nkpd1 7 19517838 to 19525056 7218 + protein coding gene NTPase, KAP family P-loop domain containing 1
Tssr64870 7 19517894 to 19517916 22 + TSS region transcription start site region 64870
Cpgi18496 7 19519722 to 19520439 717 CpG island CpG island 18496
Cpgi18497 7 19522719 to 19524781 2062 CpG island CpG island 18497
Ppp1r37 7 19530967 to 19563071 32104 - protein coding gene protein phosphatase 1, regulatory subunit 37
Cpgi18498 7 19545535 to 19545846 311 CpG island CpG island 18498
Cpgi18499 7 19561137 to 19562809 1672 CpG island CpG island 18499
Tssr70928 7 19562122 to 19562166 44 - TSS region transcription start site region 70928
Tssr70929 7 19562168 to 19562197 29 - TSS region transcription start site region 70929
Tssr70930 7 19562201 to 19562248 47 - TSS region transcription start site region 70930
Tssr70931 7 19562377 to 19562401 24 - TSS region transcription start site region 70931
Tssr70932 7 19562412 to 19562437 25 - TSS region transcription start site region 70932
Gemin7 7 19564949 to 19573343 8394 - protein coding gene gem nuclear organelle associated protein 7
Cpgi18500 7 19572983 to 19573666 683 CpG island CpG island 18500
Tssr70933 7 19573357 to 19573363 6 - TSS region transcription start site region 70933
Tssr70934 7 19573372 to 19573377 5 - TSS region transcription start site region 70934
Tssr70935 7 19573379 to 19573403 24 - TSS region transcription start site region 70935
Tssr70936 7 19573793 to 19573845 52 - TSS region transcription start site region 70936
Cpgi18501 7 19577040 to 19578014 974 CpG island CpG island 18501
Zfp296 7 19577287 to 19580656 3369 + protein coding gene zinc finger protein 296
Tssr64871 7 19577314 to 19577329 15 + TSS region transcription start site region 64871
Tssr64872 7 19577803 to 19577828 25 + TSS region transcription start site region 64872
Tssr70937 7 19578028 to 19578043 15 - TSS region transcription start site region 70937
Tssr70938 7 19578044 to 19578059 15 - TSS region transcription start site region 70938
Clasrp 7 19581035 to 19604486 23451 - protein coding gene CLK4-associating serine/arginine rich protein
Tssr70939 7 19584354 to 19584364 10 - TSS region transcription start site region 70939
Cpgi18502 7 19585954 to 19587020 1066 CpG island CpG island 18502
Tssr70940 7 19586417 to 19586430 13 - TSS region transcription start site region 70940
Tssr70941 7 19586449 to 19586462 13 - TSS region transcription start site region 70941
Eae4 7 142366067 to 19413473 -122952594 QTL experimental allergic encephalomyelitis susceptibility 4