Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:19350085-20170111

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373 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ercc1 7 19344778 to 19356524 11746 + protein coding gene excision repair cross-complementing rodent repair deficiency, complementation group 1
Cd3eap 7 19356014 to 19359483 3469 - protein coding gene CD3E antigen, epsilon polypeptide associated protein
Cpgi18474 7 19359096 to 19360628 1532 CpG island CpG island 18474
Tssr70910 7 19359416 to 19359476 60 - TSS region transcription start site region 70910
Tssr70911 7 19359477 to 19359488 11 - TSS region transcription start site region 70911
Tssr64840 7 19359740 to 19359758 18 + TSS region transcription start site region 64840
Ppp1r13l 7 19359749 to 19378533 18784 + protein coding gene protein phosphatase 1, regulatory subunit 13 like
Cpgi18475 7 19360961 to 19361397 436 CpG island CpG island 18475
Tssr64841 7 19361186 to 19361201 15 + TSS region transcription start site region 64841
Tssr64842 7 19361207 to 19361262 55 + TSS region transcription start site region 64842
Cpgi18476 7 19361663 to 19362061 398 CpG island CpG island 18476
Cpgi18477 7 19363877 to 19364227 350 CpG island CpG island 18477
Cpgi18478 7 19368496 to 19368774 278 CpG island CpG island 18478
Tssr64843 7 19368502 to 19368553 51 + TSS region transcription start site region 64843
Cpgi18479 7 19369788 to 19370514 726 CpG island CpG island 18479
Cpgi18480 7 19375204 to 19375857 653 CpG island CpG island 18480
Cpgi18481 7 19381552 to 19382660 1108 CpG island CpG island 18481
Tssr64844 7 19382005 to 19382052 47 + TSS region transcription start site region 64844
Ercc2 7 19382039 to 19395692 13653 + protein coding gene excision repair cross-complementing rodent repair deficiency, complementation group 2
Gm26852 7 19382220 to 19392718 10498 - antisense lncRNA gene predicted gene, 26852
Mir343 7 19386643 to 19386717 74 + miRNA gene microRNA 343
Klc3 7 19394437 to 19404104 9667 - protein coding gene kinesin light chain 3
Cpgi18482 7 19399857 to 19400191 334 CpG island CpG island 18482
Tssr70912 7 19399859 to 19399909 50 - TSS region transcription start site region 70912
Cpgi18483 7 19403547 to 19404424 877 CpG island CpG island 18483
Tssr70913 7 19403790 to 19403818 28 - TSS region transcription start site region 70913
Tssr64845 7 19403909 to 19403924 15 + TSS region transcription start site region 64845
Tssr70914 7 19404082 to 19404130 48 - TSS region transcription start site region 70914
Cpgi18484 7 19405443 to 19405725 282 CpG island CpG island 18484
Gm38954 7 19405689 to 19408309 2620 + lncRNA gene predicted gene, 38954
Tssr64846 7 19411086 to 19411101 15 + TSS region transcription start site region 64846
Ckm 7 19411094 to 19421583 10489 + protein coding gene creatine kinase, muscle
D7Nds6 7 19413473 to 19413596 123 DNA segment DNA segment, Chr 7, Nuffield Department of Surgery 6
Tssr64847 7 19414110 to 19414161 51 + TSS region transcription start site region 64847
Tssr64848 7 19414164 to 19414171 7 + TSS region transcription start site region 64848
Tssr64849 7 19414187 to 19414199 12 + TSS region transcription start site region 64849
Tssr64850 7 19414225 to 19414255 30 + TSS region transcription start site region 64850
Tssr64851 7 19414885 to 19414896 11 + TSS region transcription start site region 64851
Tssr64852 7 19414931 to 19414949 18 + TSS region transcription start site region 64852
Tssr2110 7 19414962 to 19414977 15 + TSS region transcription start site region 2110
Tssr70915 7 19414967 to 19414974 7 - TSS region transcription start site region 70915
Tssr64853 7 19414983 to 19415008 25 + TSS region transcription start site region 64853
Tssr70916 7 19415016 to 19415057 41 - TSS region transcription start site region 70916
Cpgi18485 7 19415344 to 19415620 276 CpG island CpG island 18485
Tssr64854 7 19415399 to 19415424 25 + TSS region transcription start site region 64854
Tssr64855 7 19415462 to 19415476 14 + TSS region transcription start site region 64855
Tssr64856 7 19416734 to 19416760 26 + TSS region transcription start site region 64856
A930016O22Rik 7 19417466 to 19421417 3951 - antisense lncRNA gene RIKEN cDNA A930016O22 gene
Cpgi18486 7 19419844 to 19420354 510 CpG island CpG island 18486
Tssr64857 7 19420157 to 19420171 14 + TSS region transcription start site region 64857
Cpgi18487 7 19421008 to 19421689 681 CpG island CpG island 18487
Tssr70917 7 19421326 to 19421351 25 - TSS region transcription start site region 70917
Mark4 7 19425102 to 19458797 33695 - protein coding gene MAP/microtubule affinity regulating kinase 4
Cpgi18488 7 19426102 to 19426264 162 CpG island CpG island 18488
Cpgi18489 7 19457765 to 19459073 1308 CpG island CpG island 18489
Tssr70918 7 19458672 to 19458685 13 - TSS region transcription start site region 70918
Tssr70919 7 19458728 to 19458739 11 - TSS region transcription start site region 70919
Tssr70920 7 19458748 to 19458776 28 - TSS region transcription start site region 70920
Tssr70921 7 19458779 to 19458800 21 - TSS region transcription start site region 70921
Tssr70922 7 19458801 to 19458856 55 - TSS region transcription start site region 70922
Tssr64858 7 19458930 to 19458935 5 + TSS region transcription start site region 64858
Tssr70923 7 19459235 to 19459253 18 - TSS region transcription start site region 70923
Gm23099 7 19460797 to 19460935 138 - snRNA gene predicted gene, 23099
Tssr64859 7 19463267 to 19463292 25 + TSS region transcription start site region 64859
Tssr64860 7 19463293 to 19463308 15 + TSS region transcription start site region 64860
Exoc3l2 7 19463331 to 19496762 33431 + protein coding gene exocyst complex component 3-like 2
Gm45167 7 19468228 to 19468549 321 + pseudogene predicted gene 45167
Cpgi18490 7 19469399 to 19470118 719 CpG island CpG island 18490
Cpgi18491 7 19473602 to 19474751 1149 CpG island CpG island 18491
Tssr64861 7 19489045 to 19489067 22 + TSS region transcription start site region 64861
Tssr64862 7 19489083 to 19489094 11 + TSS region transcription start site region 64862
Cpgi18492 7 19489258 to 19489946 688 CpG island CpG island 18492
Cpgi18493 7 19491726 to 19492200 474 CpG island CpG island 18493
Cpgi18494 7 19495080 to 19495313 233 CpG island CpG island 18494
Bloc1s3 7 19505783 to 19508358 2575 - protein coding gene biogenesis of lysosomal organelles complex-1, subunit 3
Tssr70924 7 19506686 to 19506694 8 - TSS region transcription start site region 70924
Cpgi18495 7 19506858 to 19509132 2274 CpG island CpG island 18495
Tssr64863 7 19507320 to 19507360 40 + TSS region transcription start site region 64863
Tssr70925 7 19508292 to 19508304 12 - TSS region transcription start site region 70925
Tssr70926 7 19508321 to 19508377 56 - TSS region transcription start site region 70926
Tssr70927 7 19508380 to 19508389 9 - TSS region transcription start site region 70927
Tssr64864 7 19508714 to 19508741 27 + TSS region transcription start site region 64864
Trappc6a 7 19508729 to 19516145 7416 + protein coding gene trafficking protein particle complex 6A
Tssr64865 7 19508743 to 19508754 11 + TSS region transcription start site region 64865
Tssr64866 7 19508760 to 19508771 11 + TSS region transcription start site region 64866
Tssr64867 7 19514518 to 19514542 24 + TSS region transcription start site region 64867
Tssr64868 7 19517620 to 19517631 11 + TSS region transcription start site region 64868
Tssr64869 7 19517716 to 19517730 14 + TSS region transcription start site region 64869
Tssr2111 7 19517740 to 19517749 9 + TSS region transcription start site region 2111
Nkpd1 7 19517838 to 19525056 7218 + protein coding gene NTPase, KAP family P-loop domain containing 1
Tssr64870 7 19517894 to 19517916 22 + TSS region transcription start site region 64870
Cpgi18496 7 19519722 to 19520439 717 CpG island CpG island 18496
Cpgi18497 7 19522719 to 19524781 2062 CpG island CpG island 18497
Ppp1r37 7 19530967 to 19563071 32104 - protein coding gene protein phosphatase 1, regulatory subunit 37
Cpgi18498 7 19545535 to 19545846 311 CpG island CpG island 18498
Cpgi18499 7 19561137 to 19562809 1672 CpG island CpG island 18499
Tssr70928 7 19562122 to 19562166 44 - TSS region transcription start site region 70928
Tssr70929 7 19562168 to 19562197 29 - TSS region transcription start site region 70929
Tssr70930 7 19562201 to 19562248 47 - TSS region transcription start site region 70930
Tssr70931 7 19562377 to 19562401 24 - TSS region transcription start site region 70931
Tssr70932 7 19562412 to 19562437 25 - TSS region transcription start site region 70932
Gemin7 7 19564949 to 19573343 8394 - protein coding gene gem nuclear organelle associated protein 7
Cpgi18500 7 19572983 to 19573666 683 CpG island CpG island 18500
Tssr70933 7 19573357 to 19573363 6 - TSS region transcription start site region 70933
Tssr70934 7 19573372 to 19573377 5 - TSS region transcription start site region 70934
Tssr70935 7 19573379 to 19573403 24 - TSS region transcription start site region 70935
Tssr70936 7 19573793 to 19573845 52 - TSS region transcription start site region 70936
Cpgi18501 7 19577040 to 19578014 974 CpG island CpG island 18501
Zfp296 7 19577287 to 19580656 3369 + protein coding gene zinc finger protein 296
Tssr64871 7 19577314 to 19577329 15 + TSS region transcription start site region 64871
Tssr64872 7 19577803 to 19577828 25 + TSS region transcription start site region 64872
Tssr70937 7 19578028 to 19578043 15 - TSS region transcription start site region 70937
Tssr70938 7 19578044 to 19578059 15 - TSS region transcription start site region 70938
Clasrp 7 19581035 to 19604486 23451 - protein coding gene CLK4-associating serine/arginine rich protein
Tssr70939 7 19584354 to 19584364 10 - TSS region transcription start site region 70939
Cpgi18502 7 19585954 to 19587020 1066 CpG island CpG island 18502
Tssr70940 7 19586417 to 19586430 13 - TSS region transcription start site region 70940
Tssr70941 7 19586449 to 19586462 13 - TSS region transcription start site region 70941
Tssr70942 7 19592795 to 19592801 6 - TSS region transcription start site region 70942
Tssr70943 7 19592810 to 19592829 19 - TSS region transcription start site region 70943
Gm26890 7 19597293 to 19602294 5001 - lincRNA gene predicted gene, 26890
Cpgi18503 7 19603879 to 19604685 806 CpG island CpG island 18503
Tssr70944 7 19604427 to 19604438 11 - TSS region transcription start site region 70944
Tssr70945 7 19604444 to 19604492 48 - TSS region transcription start site region 70945
Relb 7 19606217 to 19629438 23221 - protein coding gene avian reticuloendotheliosis viral (v-rel) oncogene related B
Cpgi18504 7 19619415 to 19620072 657 CpG island CpG island 18504
Tssr70946 7 19622381 to 19622397 16 - TSS region transcription start site region 70946
Cpgi18505 7 19628375 to 19629956 1581 CpG island CpG island 18505
Tssr70947 7 19628403 to 19628429 26 - TSS region transcription start site region 70947
Tssr70948 7 19628669 to 19628675 6 - TSS region transcription start site region 70948
Tssr64873 7 19628978 to 19628998 20 + TSS region transcription start site region 64873
Tssr70949 7 19629355 to 19629451 96 - TSS region transcription start site region 70949
Clptm1 7 19631580 to 19665030 33450 - protein coding gene cleft lip and palate associated transmembrane protein 1
Tssr70950 7 19635798 to 19635820 22 - TSS region transcription start site region 70950
Tssr70951 7 19643089 to 19643122 33 - TSS region transcription start site region 70951
6430500G05Rik 7 19652635 to 19653869 1234 unclassified gene RIKEN cDNA 6430500G05 gene
Cpgi18506 7 19664191 to 19665823 1632 CpG island CpG island 18506
Tssr70952 7 19665005 to 19665028 23 - TSS region transcription start site region 70952
Tssr64874 7 19665449 to 19665482 33 + TSS region transcription start site region 64874
Apoc2 7 19671579 to 19677941 6362 - protein coding gene apolipoprotein C-II
Gm44805 7 19671584 to 19681423 9839 - protein coding gene predicted gene 44805
Tssr70953 7 19671693 to 19671703 10 - TSS region transcription start site region 70953
Tssr70954 7 19671789 to 19671828 39 - TSS region transcription start site region 70954
Tssr70955 7 19671829 to 19671850 21 - TSS region transcription start site region 70955
Tssr64875 7 19673222 to 19673254 32 + TSS region transcription start site region 64875
Tssr70956 7 19673588 to 19673600 12 - TSS region transcription start site region 70956
Tssr70957 7 19675900 to 19676005 105 - TSS region transcription start site region 70957
Tssr70958 7 19676749 to 19676767 18 - TSS region transcription start site region 70958
Tssr70959 7 19676782 to 19676800 18 - TSS region transcription start site region 70959
Tssr70960 7 19676824 to 19676866 42 - TSS region transcription start site region 70960
Tssr70961 7 19677020 to 19677032 12 - TSS region transcription start site region 70961
Tssr70962 7 19677947 to 19677952 5 - TSS region transcription start site region 70962
Apoc4 7 19678084 to 19681460 3376 - protein coding gene apolipoprotein C-IV
Tssr64876 7 19678179 to 19678210 31 + TSS region transcription start site region 64876
Tssr70963 7 19681350 to 19681357 7 - TSS region transcription start site region 70963
Tssr70964 7 19681373 to 19681374 1 - TSS region transcription start site region 70964
Tssr70965 7 19681380 to 19681395 15 - TSS region transcription start site region 70965
Tssr70966 7 19681396 to 19681467 71 - TSS region transcription start site region 70966
Apoc1 7 19689480 to 19692659 3179 - protein coding gene apolipoprotein C-I
Tssr64877 7 19689554 to 19689572 18 + TSS region transcription start site region 64877
Tssr64878 7 19689583 to 19689604 21 + TSS region transcription start site region 64878
Tssr64879 7 19691889 to 19691916 27 + TSS region transcription start site region 64879
Tssr70967 7 19691946 to 19691956 10 - TSS region transcription start site region 70967
Tssr70968 7 19692004 to 19692013 9 - TSS region transcription start site region 70968
Tssr70969 7 19692017 to 19692039 22 - TSS region transcription start site region 70969
Tssr70970 7 19692451 to 19692471 20 - TSS region transcription start site region 70970
Tssr70971 7 19692629 to 19692648 19 - TSS region transcription start site region 70971
Tssr70972 7 19692908 to 19692911 3 - TSS region transcription start site region 70972
Apoe 7 19696244 to 19699188 2944 - protein coding gene apolipoprotein E
Tssr64880 7 19696268 to 19696274 6 + TSS region transcription start site region 64880
Tssr70973 7 19696292 to 19696329 37 - TSS region transcription start site region 70973
Tssr64881 7 19696320 to 19696337 17 + TSS region transcription start site region 64881
Tssr70974 7 19696338 to 19696362 24 - TSS region transcription start site region 70974
Tssr64882 7 19696364 to 19696396 32 + TSS region transcription start site region 64882
Tssr70975 7 19696366 to 19696387 21 - TSS region transcription start site region 70975
Tssr70976 7 19696401 to 19696439 38 - TSS region transcription start site region 70976
Tssr64883 7 19696402 to 19696413 11 + TSS region transcription start site region 64883
Tssr64884 7 19696429 to 19696441 12 + TSS region transcription start site region 64884
Tssr70977 7 19696449 to 19696460 11 - TSS region transcription start site region 70977
Tssr2112 7 19696451 to 19696461 10 + TSS region transcription start site region 2112
Tssr70978 7 19696464 to 19696483 19 - TSS region transcription start site region 70978
Tssr2113 7 19696476 to 19696491 15 + TSS region transcription start site region 2113
Tssr70979 7 19696488 to 19696491 3 - TSS region transcription start site region 70979
Tssr70980 7 19696498 to 19696505 7 - TSS region transcription start site region 70980
Tssr64885 7 19696508 to 19696519 11 + TSS region transcription start site region 64885
Tssr70981 7 19696519 to 19696529 10 - TSS region transcription start site region 70981
Cpgi18507 7 19696521 to 19697078 557 CpG island CpG island 18507
Tssr64886 7 19696529 to 19696554 25 + TSS region transcription start site region 64886
Tssr70982 7 19696533 to 19696558 25 - TSS region transcription start site region 70982
Tssr64887 7 19696561 to 19696572 11 + TSS region transcription start site region 64887
Tssr70983 7 19696566 to 19696579 13 - TSS region transcription start site region 70983
Tssr70984 7 19696583 to 19696639 56 - TSS region transcription start site region 70984
Tssr2114 7 19696591 to 19696617 26 + TSS region transcription start site region 2114
Tssr2115 7 19696627 to 19696645 18 + TSS region transcription start site region 2115
Tssr70985 7 19696648 to 19696674 26 - TSS region transcription start site region 70985
Tssr70986 7 19696681 to 19696703 22 - TSS region transcription start site region 70986
Tssr2116 7 19696702 to 19696715 13 + TSS region transcription start site region 2116
Tssr70987 7 19696711 to 19696748 37 - TSS region transcription start site region 70987
Tssr2117 7 19696724 to 19696769 45 + TSS region transcription start site region 2117
Tssr70988 7 19696755 to 19696767 12 - TSS region transcription start site region 70988