Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:19001817-19182160

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi18427 7 19003801 to 19005620 1819 CpG island CpG island 18427
Tssr64765 7 19004047 to 19004095 48 + TSS region transcription start site region 64765
Irf2bp1 7 19004065 to 19006763 2698 + protein coding gene interferon regulatory factor 2 binding protein 1
Tssr70865 7 19004233 to 19004266 33 - TSS region transcription start site region 70865
Tssr64766 7 19004359 to 19004377 18 + TSS region transcription start site region 64766
Cpgi18428 7 19012266 to 19012487 221 CpG island CpG island 18428
Foxa3 7 19013284 to 19023538 10254 - protein coding gene forkhead box A3
Cpgi18429 7 19014489 to 19014736 247 CpG island CpG island 18429
Cpgi18430 7 19023166 to 19025045 1879 CpG island CpG island 18430
Tssr70866 7 19023542 to 19023546 4 - TSS region transcription start site region 70866
Tssr64767 7 19024245 to 19024270 25 + TSS region transcription start site region 64767
Tssr64768 7 19024364 to 19024385 21 + TSS region transcription start site region 64768
Sympk 7 19024377 to 19054618 30241 + protein coding gene symplekin
Tssr64769 7 19024387 to 19024439 52 + TSS region transcription start site region 64769
Tssr70867 7 19037212 to 19037221 9 - TSS region transcription start site region 70867
Tssr64770 7 19037345 to 19037363 18 + TSS region transcription start site region 64770
Tssr64771 7 19052312 to 19052348 36 + TSS region transcription start site region 64771
Cpgi18431 7 19054094 to 19054250 156 CpG island CpG island 18431
Cpgi18432 7 19054612 to 19054888 276 CpG island CpG island 18432
Tssr64772 7 19054662 to 19054674 12 + TSS region transcription start site region 64772
Tssr64773 7 19054683 to 19054707 24 + TSS region transcription start site region 64773
Rsph6a 7 19054690 to 19074447 19757 + protein coding gene radial spoke head 6 homolog A (Chlamydomonas)
Cpgi18433 7 19065292 to 19066148 856 CpG island CpG island 18433
Cpgi18434 7 19075615 to 19077482 1867 CpG island CpG island 18434
Tssr64774 7 19076071 to 19076117 46 + TSS region transcription start site region 64774
Tssr64775 7 19076173 to 19076237 64 + TSS region transcription start site region 64775
Dmwd 7 19076227 to 19082776 6549 + protein coding gene dystrophia myotonica-containing WD repeat motif
Tssr64776 7 19076242 to 19076273 31 + TSS region transcription start site region 64776
Tssr64777 7 19076401 to 19076409 8 + TSS region transcription start site region 64777
Cpgi18435 7 19077835 to 19078126 291 CpG island CpG island 18435
Tssr64778 7 19080656 to 19080666 10 + TSS region transcription start site region 64778
Tssr64779 7 19080706 to 19080723 17 + TSS region transcription start site region 64779
Tssr64780 7 19083842 to 19083894 52 + TSS region transcription start site region 64780
Dmpk 7 19083849 to 19093821 9972 + protein coding gene dystrophia myotonica-protein kinase
Cpgi18436 7 19086049 to 19086382 333 CpG island CpG island 18436
Tssr64781 7 19086272 to 19086333 61 + TSS region transcription start site region 64781
Mir3100 7 19086828 to 19086892 64 + miRNA gene microRNA 3100
Cpgi18437 7 19086901 to 19087069 168 CpG island CpG island 18437
Cpgi18438 7 19091817 to 19092160 343 CpG island CpG island 18438
Cpgi18439 7 19092452 to 19092664 212 CpG island CpG island 18439
Cpgi18440 7 19092940 to 19093620 680 CpG island CpG island 18440
Tssr64782 7 19092970 to 19092982 12 + TSS region transcription start site region 64782
Cpgi18441 7 19093870 to 19096018 2148 CpG island CpG island 18441
Six5 7 19094594 to 19098549 3955 + protein coding gene sine oculis-related homeobox 5
Tssr64783 7 19094615 to 19094633 18 + TSS region transcription start site region 64783
Tssr64784 7 19094714 to 19094739 25 + TSS region transcription start site region 64784
Tssr70868 7 19095556 to 19095572 16 - TSS region transcription start site region 70868
Gm4969 7 19099046 to 19118368 19322 - protein coding gene predicted gene 4969
Cpgi18442 7 19117995 to 19118846 851 CpG island CpG island 18442
Tssr70869 7 19118332 to 19118353 21 - TSS region transcription start site region 70869
Tssr70870 7 19118357 to 19118404 47 - TSS region transcription start site region 70870
Tssr64785 7 19119853 to 19119913 60 + TSS region transcription start site region 64785
Fbxo46 7 19119859 to 19138261 18402 + protein coding gene F-box protein 46
Cpgi18443 7 19131421 to 19131871 450 CpG island CpG island 18443
Tssr64786 7 19131686 to 19131709 23 + TSS region transcription start site region 64786
Tssr64787 7 19131712 to 19131729 17 + TSS region transcription start site region 64787
Cpgi18444 7 19136815 to 19136995 180 CpG island CpG island 18444
Tssr64788 7 19137528 to 19137532 4 + TSS region transcription start site region 64788
Tssr70871 7 19140170 to 19140187 17 - TSS region transcription start site region 70871
Qpctl 7 19140217 to 19149196 8979 - protein coding gene glutaminyl-peptide cyclotransferase-like
Cpgi18445 7 19148844 to 19150061 1217 CpG island CpG island 18445
Tssr70872 7 19149189 to 19149273 84 - TSS region transcription start site region 70872
Tssr64789 7 19149810 to 19149844 34 + TSS region transcription start site region 64789
Snrpd2 7 19149838 to 19152726 2888 + protein coding gene small nuclear ribonucleoprotein D2
Gipr 7 19156061 to 19166127 10066 - protein coding gene gastric inhibitory polypeptide receptor
Cpgi18446 7 19157328 to 19157771 443 CpG island CpG island 18446
Cpgi18447 7 19159458 to 19159808 350 CpG island CpG island 18447
Cpgi18448 7 19160322 to 19160540 218 CpG island CpG island 18448
Tssr70873 7 19165133 to 19165154 21 - TSS region transcription start site region 70873
Tssr70874 7 19166119 to 19166134 15 - TSS region transcription start site region 70874
C130070B15Rik 7 19167136 to 19169680 2544 unclassified non-coding RNA gene RIKEN cDNA C130070B15 gene
Tssr70875 7 19169659 to 19169682 23 - TSS region transcription start site region 70875
Cpgi18449 7 19172935 to 19173194 259 CpG island CpG island 18449
Cpgi18450 7 19176294 to 19176810 516 CpG island CpG island 18450
Tssr64790 7 19176416 to 19176440 24 + TSS region transcription start site region 64790
Eml2 7 19176421 to 19206482 30061 + protein coding gene echinoderm microtubule associated protein like 2
Tssr64791 7 19176446 to 19176474 28 + TSS region transcription start site region 64791
Tssr64792 7 19176483 to 19176512 29 + TSS region transcription start site region 64792
Tssr64793 7 19176513 to 19176537 24 + TSS region transcription start site region 64793
Tssr64794 7 19176648 to 19176693 45 + TSS region transcription start site region 64794
Cpgi18451 7 19178125 to 19178294 169 CpG island CpG island 18451
Tssr64795 7 19178203 to 19178239 36 + TSS region transcription start site region 64795
Cpgi18452 7 19178957 to 19179931 974 CpG island CpG island 18452
Tssr64796 7 19178981 to 19179037 56 + TSS region transcription start site region 64796
Cpgi18453 7 19181076 to 19181573 497 CpG island CpG island 18453
Tssr64797 7 19181162 to 19181202 40 + TSS region transcription start site region 64797
Tssr64798 7 19181211 to 19181221 10 + TSS region transcription start site region 64798
Tssr64799 7 19181293 to 19181325 32 + TSS region transcription start site region 64799
Tssr64800 7 19181407 to 19181457 50 + TSS region transcription start site region 64800
Mir330 7 19181465 to 19181562 97 + miRNA gene microRNA 330