Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:18999377-19079618

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mypop 7 18991245 to 19001766 10521 + protein coding gene Myb-related transcription factor, partner of profilin
Mypopos 7 18993367 to 19001222 7855 - antisense lncRNA gene Myb-related transcription factor, partner of profilin, opposite strand
Cpgi18426 7 19001140 to 19001293 153 CpG island CpG island 18426
Tssr70863 7 19001160 to 19001174 14 - TSS region transcription start site region 70863
Tssr70864 7 19001184 to 19001239 55 - TSS region transcription start site region 70864
Cpgi18427 7 19003801 to 19005620 1819 CpG island CpG island 18427
Tssr64765 7 19004047 to 19004095 48 + TSS region transcription start site region 64765
Irf2bp1 7 19004065 to 19006763 2698 + protein coding gene interferon regulatory factor 2 binding protein 1
Tssr70865 7 19004233 to 19004266 33 - TSS region transcription start site region 70865
Tssr64766 7 19004359 to 19004377 18 + TSS region transcription start site region 64766
Cpgi18428 7 19012266 to 19012487 221 CpG island CpG island 18428
Foxa3 7 19013284 to 19023538 10254 - protein coding gene forkhead box A3
Cpgi18429 7 19014489 to 19014736 247 CpG island CpG island 18429
Cpgi18430 7 19023166 to 19025045 1879 CpG island CpG island 18430
Tssr70866 7 19023542 to 19023546 4 - TSS region transcription start site region 70866
Tssr64767 7 19024245 to 19024270 25 + TSS region transcription start site region 64767
Tssr64768 7 19024364 to 19024385 21 + TSS region transcription start site region 64768
Sympk 7 19024377 to 19054618 30241 + protein coding gene symplekin
Tssr64769 7 19024387 to 19024439 52 + TSS region transcription start site region 64769
Tssr70867 7 19037212 to 19037221 9 - TSS region transcription start site region 70867
Tssr64770 7 19037345 to 19037363 18 + TSS region transcription start site region 64770
Tssr64771 7 19052312 to 19052348 36 + TSS region transcription start site region 64771
Cpgi18431 7 19054094 to 19054250 156 CpG island CpG island 18431
Cpgi18432 7 19054612 to 19054888 276 CpG island CpG island 18432
Tssr64772 7 19054662 to 19054674 12 + TSS region transcription start site region 64772
Tssr64773 7 19054683 to 19054707 24 + TSS region transcription start site region 64773
Rsph6a 7 19054690 to 19074447 19757 + protein coding gene radial spoke head 6 homolog A (Chlamydomonas)
Cpgi18433 7 19065292 to 19066148 856 CpG island CpG island 18433
Cpgi18434 7 19075615 to 19077482 1867 CpG island CpG island 18434
Tssr64774 7 19076071 to 19076117 46 + TSS region transcription start site region 64774
Tssr64775 7 19076173 to 19076237 64 + TSS region transcription start site region 64775
Dmwd 7 19076227 to 19082776 6549 + protein coding gene dystrophia myotonica-containing WD repeat motif
Tssr64776 7 19076242 to 19076273 31 + TSS region transcription start site region 64776
Tssr64777 7 19076401 to 19076409 8 + TSS region transcription start site region 64777
Cpgi18435 7 19077835 to 19078126 291 CpG island CpG island 18435