Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:18236392-18996403

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153 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D7Jcs5 7 18238006 to 18238202 196 DNA segment DNA segment, Chr 7, John C. Schimenti 5
Tssr64734 7 18245202 to 18245216 14 + TSS region transcription start site region 64734
Tssr64735 7 18245235 to 18245236 1 + TSS region transcription start site region 64735
Mill1 7 18245347 to 18266092 20745 + protein coding gene MHC I like leukocyte 1
Tssr64736 7 18245385 to 18245402 17 + TSS region transcription start site region 64736
Gm33626 7 18318718 to 18321091 2373 - lncRNA gene predicted gene, 33626
Psg18 7 18345744 to 18355039 9295 - protein coding gene pregnancy specific glycoprotein 18
Tssr70816 7 18345798 to 18345814 16 - TSS region transcription start site region 70816
Tssr70817 7 18354981 to 18355016 35 - TSS region transcription start site region 70817
Gm5997 7 18375547 to 18377523 1976 - pseudogene predicted gene 5997
Gm45104 7 18396516 to 18400865 4349 - unclassified gene predicted gene 45104
Tssr2092 7 18402891 to 18402917 26 - TSS region transcription start site region 2092
Tssr70818 7 18404036 to 18404041 5 - TSS region transcription start site region 70818
Gm24715 7 18417839 to 18417933 94 - miRNA gene predicted gene, 24715
Psg28 7 18422536 to 18432041 9505 - protein coding gene pregnancy-specific glycoprotein 28
Tssr70819 7 18431993 to 18432005 12 - TSS region transcription start site region 70819
Tssr70820 7 18432033 to 18432065 32 - TSS region transcription start site region 70820
Gm44871 7 18435656 to 18436653 997 - pseudogene predicted gene 44871
Gm8314 7 18454742 to 18456688 1946 - pseudogene predicted gene 8314
Tssr64737 7 18472385 to 18472388 3 + TSS region transcription start site region 64737
Psg26 7 18474582 to 18484177 9595 - protein coding gene pregnancy-specific glycoprotein 26
Tssr64738 7 18474836 to 18474869 33 + TSS region transcription start site region 64738
Tssr70821 7 18475014 to 18475023 9 - TSS region transcription start site region 70821
Tssr2093 7 18484087 to 18484095 8 - TSS region transcription start site region 2093
Tssr70822 7 18484485 to 18484488 3 - TSS region transcription start site region 70822
Gm45156 7 18493939 to 18494916 977 - pseudogene predicted gene 45156
Gm4880 7 18509861 to 18511630 1769 - pseudogene predicted pseudogene 4880
Psg25 7 18519702 to 18532268 12566 - protein coding gene pregnancy-specific glycoprotein 25
Tssr70823 7 18521108 to 18521133 25 - TSS region transcription start site region 70823
Tssr70824 7 18524756 to 18524764 8 - TSS region transcription start site region 70824
Tssr2094 7 18524764 to 18524793 29 - TSS region transcription start site region 2094
Tssr70825 7 18532225 to 18532242 17 - TSS region transcription start site region 70825
Tssr70826 7 18532394 to 18532413 19 - TSS region transcription start site region 70826
Gm26062 7 18549085 to 18549191 106 + snRNA gene predicted gene, 26062
Psg27 7 18556514 to 18567305 10791 - protein coding gene pregnancy-specific glycoprotein 27
Tssr70827 7 18556737 to 18556751 14 - TSS region transcription start site region 70827
Tssr70828 7 18556812 to 18556825 13 - TSS region transcription start site region 70828
Tssr70829 7 18560560 to 18560569 9 - TSS region transcription start site region 70829
Tssr70830 7 18560612 to 18560624 12 - TSS region transcription start site region 70830
Tssr70831 7 18560688 to 18560702 14 - TSS region transcription start site region 70831
Tssr70832 7 18561928 to 18561961 33 - TSS region transcription start site region 70832
Tssr70833 7 18562013 to 18562036 23 - TSS region transcription start site region 70833
Tssr64739 7 18565083 to 18565090 7 + TSS region transcription start site region 64739
Tssr64740 7 18565105 to 18565111 6 + TSS region transcription start site region 64740
Tssr70834 7 18567191 to 18567197 6 - TSS region transcription start site region 70834
Tssr70835 7 18567287 to 18567298 11 - TSS region transcription start site region 70835
Tssr70836 7 18567318 to 18567345 27 - TSS region transcription start site region 70836
Tssr70837 7 18567374 to 18567395 21 - TSS region transcription start site region 70837
Tssr70838 7 18567518 to 18567523 5 - TSS region transcription start site region 70838
Tssr2095 7 18567549 to 18567561 12 - TSS region transcription start site region 2095
Gm19091 7 18577701 to 18579022 1321 - pseudogene predicted gene, 19091
Gm44657 7 18579180 to 18580156 976 - pseudogene predicted gene 44657
Psg23 7 18606343 to 18616501 10158 - protein coding gene pregnancy-specific glycoprotein 23
Tssr2096 7 18607038 to 18607057 19 - TSS region transcription start site region 2096
Tssr70839 7 18616392 to 18616403 11 - TSS region transcription start site region 70839
Tssr70840 7 18616498 to 18616507 9 - TSS region transcription start site region 70840
Gm19092 7 18626691 to 18627990 1299 - pseudogene predicted gene, 19092
Gm44656 7 18628157 to 18629153 996 - pseudogene predicted gene 44656
Psg21 7 18646736 to 18656725 9989 - protein coding gene pregnancy-specific glycoprotein 21
Tssr70841 7 18646987 to 18647006 19 - TSS region transcription start site region 70841
Tssr64741 7 18646989 to 18646999 10 + TSS region transcription start site region 64741
Tssr70842 7 18647023 to 18647030 7 - TSS region transcription start site region 70842
Tssr70843 7 18647034 to 18647039 5 - TSS region transcription start site region 70843
Tssr2097 7 18647046 to 18647049 3 - TSS region transcription start site region 2097
Tssr64742 7 18647073 to 18647094 21 + TSS region transcription start site region 64742
Tssr70844 7 18647093 to 18647108 15 - TSS region transcription start site region 70844
Tssr70845 7 18656595 to 18656604 9 - TSS region transcription start site region 70845
Tssr70846 7 18656611 to 18656621 10 - TSS region transcription start site region 70846
Tssr70847 7 18656720 to 18656728 8 - TSS region transcription start site region 70847
Gm44654 7 18666916 to 18667963 1047 - pseudogene predicted gene 44654
Psg20 7 18674366 to 18685992 11626 - protein coding gene pregnancy-specific glycoprotein 20
Tssr2098 7 18686184 to 18686190 6 - TSS region transcription start site region 2098
Gm44655 7 18689760 to 18691152 1392 - pseudogene predicted gene 44655
Tssr70848 7 18711219 to 18711223 4 - TSS region transcription start site region 70848
Gm44563 7 18713590 to 18713767 177 + pseudogene predicted gene 44563
Tssr64743 7 18718075 to 18718092 17 + TSS region transcription start site region 64743
Psg22 7 18718090 to 18727248 9158 + protein coding gene pregnancy-specific glycoprotein 22
Tssr64744 7 18718117 to 18718129 12 + TSS region transcription start site region 64744
Tssr64745 7 18718199 to 18718212 13 + TSS region transcription start site region 64745
Tssr2099 7 18727021 to 18727043 22 + TSS region transcription start site region 2099
Tssr70849 7 18735137 to 18735140 3 - TSS region transcription start site region 70849
Gm44564 7 18737447 to 18737626 179 + pseudogene predicted gene 44564
Gm44566 7 18740548 to 18740851 303 + pseudogene predicted gene 44566
Gm44565 7 18742327 to 18743611 1284 + pseudogene predicted gene 44565
Gm24464 7 18745103 to 18745209 106 - snRNA gene predicted gene, 24464
Cpgi18415 7 18746359 to 18746525 166 CpG island CpG island 18415
Tssr70850 7 18746652 to 18746667 15 - TSS region transcription start site region 70850
Gm44561 7 18760858 to 18761121 263 + pseudogene predicted gene 44561
Tssr64746 7 18786282 to 18786323 41 + TSS region transcription start site region 64746
Sycp1-ps1 7 18786332 to 18789099 2767 + pseudogene synaptonemal complex protein 1, pseudogene 1
Tssr64747 7 18787758 to 18787760 2 + TSS region transcription start site region 64747
Psg19 7 18789567 to 18798520 8953 - protein coding gene pregnancy specific glycoprotein 19
Tssr70851 7 18792247 to 18792264 17 - TSS region transcription start site region 70851
Tssr70852 7 18798479 to 18798480 1 - TSS region transcription start site region 70852
Tssr70853 7 18798504 to 18798516 12 - TSS region transcription start site region 70853
Tssr70854 7 18798519 to 18798526 7 - TSS region transcription start site region 70854
Gm19126 7 18801018 to 18801835 817 - pseudogene predicted gene, 19126
Tssr64748 7 18812572 to 18812587 15 + TSS region transcription start site region 64748
Psg17 7 18813937 to 18821591 7654 - protein coding gene pregnancy specific glycoprotein 17
Tssr70855 7 18821598 to 18821612 14 - TSS region transcription start site region 70855
Gm36044 7 18822788 to 18826231 3443 - protein coding gene predicted gene, 36044
Cpgi18416 7 18828178 to 18828568 390 CpG island CpG island 18416
Gm18855 7 18831775 to 18832344 569 + pseudogene predicted gene, 18855
Tssr64749 7 18839954 to 18840006 52 + TSS region transcription start site region 64749
Mill2 7 18839966 to 18865402 25436 + protein coding gene MHC I like leukocyte 2
Tssr64750 7 18840011 to 18840020 9 + TSS region transcription start site region 64750
Tssr64751 7 18844445 to 18844448 3 + TSS region transcription start site region 64751
Cpgi18417 7 18873445 to 18873596 151 CpG island CpG island 18417
Tssr64752 7 18884679 to 18884709 30 + TSS region transcription start site region 64752
Pglyrp1 7 18884690 to 18890438 5748 + protein coding gene peptidoglycan recognition protein 1
D7Dcr1 7 18886582 to 18886707 125 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 1
D7Mit191.2 7 18886706 to 18886826 120 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 191.2
Tssr70856 7 18890355 to 18890371 16 - TSS region transcription start site region 70856
Tssr70857 7 18890417 to 18890424 7 - TSS region transcription start site region 70857
Ccdc61 7 18890883 to 18910411 19528 - protein coding gene coiled-coil domain containing 61
Cpgi18418 7 18892208 to 18892704 496 CpG island CpG island 18418
Cpgi18419 7 18893037 to 18894318 1281 CpG island CpG island 18419
Cpgi18420 7 18909962 to 18910573 611 CpG island CpG island 18420
Tssr70858 7 18910240 to 18910285 45 - TSS region transcription start site region 70858
Tssr70859 7 18910352 to 18910376 24 - TSS region transcription start site region 70859
Tssr70860 7 18910377 to 18910388 11 - TSS region transcription start site region 70860
Tssr70861 7 18910391 to 18910411 20 - TSS region transcription start site region 70861
Cpgi18421 7 18921246 to 18921451 205 CpG island CpG island 18421
Cpgi18422 7 18925201 to 18926708 1507 CpG island CpG island 18422
Tssr64753 7 18925407 to 18925459 52 + TSS region transcription start site region 64753
Tssr70862 7 18925776 to 18925786 10 - TSS region transcription start site region 70862
Tssr64754 7 18925863 to 18925899 36 + TSS region transcription start site region 64754
Nova2 7 18925888 to 18965319 39431 + protein coding gene neuro-oncological ventral antigen 2
Tssr64755 7 18925917 to 18925924 7 + TSS region transcription start site region 64755
Tssr2100 7 18925968 to 18926028 60 + TSS region transcription start site region 2100
Tssr64756 7 18950460 to 18950472 12 + TSS region transcription start site region 64756
Gm38952 7 18956197 to 18957536 1339 - lncRNA gene predicted gene, 38952
Cpgi18423 7 18957374 to 18958879 1505 CpG island CpG island 18423
Tssr64757 7 18958579 to 18958594 15 + TSS region transcription start site region 64757
Tssr64758 7 18959024 to 18959027 3 + TSS region transcription start site region 64758
Gm26821 7 18962415 to 18965173 2758 - lincRNA gene predicted gene, 26821
Tssr64759 7 18962560 to 18962564 4 + TSS region transcription start site region 64759
Cpgi18424 7 18962796 to 18963674 878 CpG island CpG island 18424
D7Jcs7 7 18965308 to 18965515 207 DNA segment DNA segment, Chr 7, John C. Schimenti 7
Tssr64760 7 18987518 to 18987524 6 + TSS region transcription start site region 64760
Nanos2 7 18987524 to 18988962 1438 + protein coding gene nanos C2HC-type zinc finger 2
Gm45058 7 18987559 to 18988324 765 - antisense lncRNA gene predicted gene 45058
Gm10676 7 18989554 to 18992774 3220 - protein coding gene predicted gene 10676
Cpgi18425 7 18990453 to 18992954 2501 CpG island CpG island 18425
Mypop 7 18991245 to 19001766 10521 + protein coding gene Myb-related transcription factor, partner of profilin
Tssr64761 7 18991289 to 18991314 25 + TSS region transcription start site region 64761
Tssr64762 7 18992400 to 18992422 22 + TSS region transcription start site region 64762
Tssr64763 7 18992425 to 18992428 3 + TSS region transcription start site region 64763
Tssr64764 7 18992429 to 18992439 10 + TSS region transcription start site region 64764
Mypopos 7 18993367 to 19001222 7855 - antisense lncRNA gene Myb-related transcription factor, partner of profilin, opposite strand
Prnr2 7 18994869 to 40024609 21029740 QTL prion resistance 2
D7Mit76 7 18994869 to 18995092 223 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 76
Sst2 7 119886157 to 18994869 -100891288 QTL susceptibility to tuberculosis 2