Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:16866357-16966375

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prkd2 7 16842902 to 16870461 27559 + protein coding gene protein kinase D2
Cpgi18397 7 16869506 to 16870062 556 CpG island CpG island 18397
9330104G04Rik 7 16871347 to 16874886 3539 - lincRNA gene RIKEN cDNA 9330104G04 gene
Tssr70770 7 16874365 to 16874396 31 - TSS region transcription start site region 70770
Tssr70771 7 16874845 to 16874889 44 - TSS region transcription start site region 70771
Cpgi18398 7 16874901 to 16875855 954 CpG island CpG island 18398
Tssr64645 7 16875302 to 16875392 90 + TSS region transcription start site region 64645
Dact3 7 16875317 to 16887301 11984 + protein coding gene dishevelled-binding antagonist of beta-catenin 3
Tssr64646 7 16875406 to 16875447 41 + TSS region transcription start site region 64646
Tssr64647 7 16876984 to 16876986 2 + TSS region transcription start site region 64647
Cpgi18399 7 16884991 to 16886573 1582 CpG island CpG island 18399
Tssr64648 7 16886422 to 16886472 50 + TSS region transcription start site region 64648
2700080J24Rik 7 16889406 to 16891067 1661 - unclassified gene RIKEN cDNA 2700080J24 gene
Cpgi18400 7 16891022 to 16891185 163 CpG island CpG island 18400
Tssr64649 7 16891755 to 16891800 45 + TSS region transcription start site region 64649
Gng8 7 16891786 to 16895436 3650 + protein coding gene guanine nucleotide binding protein (G protein), gamma 8
Tssr64650 7 16891824 to 16891851 27 + TSS region transcription start site region 64650
Cpgi18401 7 16891995 to 16892550 555 CpG island CpG island 18401
Tssr64651 7 16893109 to 16893123 14 + TSS region transcription start site region 64651
Tssr64652 7 16893802 to 16893846 44 + TSS region transcription start site region 64652
Cpgi18402 7 16894837 to 16895413 576 CpG island CpG island 18402
Tssr70772 7 16899351 to 16899358 7 - TSS region transcription start site region 70772
D7Mit56 7 16903368 to 16903498 130 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 56
Drsi 7 16903368 to 49509583 32606215 QTL DCC-related Spp1 induction
Abhr3 7 16903498 to 3266568 -13636930 QTL allergen-induced bronchial hyperresponsiveness 3
Tssr64653 7 16905971 to 16906013 42 + TSS region transcription start site region 64653
Tssr64654 7 16906488 to 16906539 51 + TSS region transcription start site region 64654
Ptgir 7 16906490 to 16910905 4415 + protein coding gene prostaglandin I receptor (IP)
Cpgi18403 7 16906884 to 16907610 726 CpG island CpG island 18403
Tssr64655 7 16907024 to 16907033 9 + TSS region transcription start site region 64655
Tssr64656 7 16908055 to 16908088 33 + TSS region transcription start site region 64656
Tssr64657 7 16908716 to 16908735 19 + TSS region transcription start site region 64657
Tssr70773 7 16910042 to 16910074 32 - TSS region transcription start site region 70773
Tssr64658 7 16910478 to 16910490 12 + TSS region transcription start site region 64658
Calm3 7 16915379 to 16924032 8653 - protein coding gene calmodulin 3
Tssr70774 7 16915460 to 16915476 16 - TSS region transcription start site region 70774
Tssr70775 7 16915591 to 16915602 11 - TSS region transcription start site region 70775
Tssr70776 7 16915652 to 16915672 20 - TSS region transcription start site region 70776
Tssr70777 7 16915797 to 16915813 16 - TSS region transcription start site region 70777
Cpgi18404 7 16915922 to 16916338 416 CpG island CpG island 18404
Tssr70778 7 16916008 to 16916035 27 - TSS region transcription start site region 70778
Tssr70779 7 16916040 to 16916060 20 - TSS region transcription start site region 70779
Tssr70780 7 16916339 to 16916353 14 - TSS region transcription start site region 70780
Tssr70781 7 16916357 to 16916375 18 - TSS region transcription start site region 70781
Tssr70782 7 16916728 to 16916836 108 - TSS region transcription start site region 70782
Tssr70783 7 16916886 to 16916915 29 - TSS region transcription start site region 70783
Tssr70784 7 16916918 to 16916938 20 - TSS region transcription start site region 70784
Tssr70785 7 16917184 to 16917212 28 - TSS region transcription start site region 70785
Tssr70786 7 16917632 to 16917647 15 - TSS region transcription start site region 70786
Tssr70787 7 16917680 to 16917699 19 - TSS region transcription start site region 70787
Tssr70788 7 16917713 to 16917728 15 - TSS region transcription start site region 70788
Gm45972 7 16921731 to 16923538 1807 + lncRNA gene predicted gene, 45972
Tssr64659 7 16922049 to 16922064 15 + TSS region transcription start site region 64659
Cpgi18405 7 16923314 to 16924654 1340 CpG island CpG island 18405
Tssr70789 7 16923875 to 16923891 16 - TSS region transcription start site region 70789
Tssr70790 7 16923901 to 16924026 125 - TSS region transcription start site region 70790
Tssr70791 7 16924132 to 16924137 5 - TSS region transcription start site region 70791
Gm32630 7 16930314 to 16932609 2295 - lncRNA gene predicted gene, 32630
Cpgi18406 7 16944454 to 16945765 1311 CpG island CpG island 18406
Tssr64660 7 16944645 to 16944720 75 + TSS region transcription start site region 64660
Pnmal2 7 16944682 to 16948828 4146 + protein coding gene PNMA-like 2
Tssr70792 7 16945649 to 16945657 8 - TSS region transcription start site region 70792
Tssr64661 7 16945694 to 16945768 74 + TSS region transcription start site region 64661
Cpgi18407 7 16946260 to 16947703 1443 CpG island CpG island 18407
Cpgi18408 7 16949951 to 16950400 449 CpG island CpG island 18408
Tssr64662 7 16950128 to 16950139 11 + TSS region transcription start site region 64662
Tssr64663 7 16950157 to 16950164 7 + TSS region transcription start site region 64663
D7Jcs1 7 16950820 to 16951114 294 DNA segment DNA segment, Chr 7, John C. Schimenti 1
Gm25815 7 16953395 to 16953501 106 - snRNA gene predicted gene, 25815
Pnmal1 7 16959679 to 16964607 4928 + protein coding gene PNMA-like 1
Tssr64664 7 16959714 to 16959800 86 + TSS region transcription start site region 64664
Tssr64665 7 16959821 to 16959832 11 + TSS region transcription start site region 64665