Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:16836347-16909886

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Strn4 7 16815889 to 16840931 25042 + protein coding gene striatin, calmodulin binding protein 4
Tssr64633 7 16838124 to 16838141 17 + TSS region transcription start site region 64633
Tssr64634 7 16838152 to 16838163 11 + TSS region transcription start site region 64634
Tssr64635 7 16838176 to 16838193 17 + TSS region transcription start site region 64635
Cpgi18392 7 16842584 to 16843883 1299 CpG island CpG island 18392
Tssr64636 7 16842896 to 16842954 58 + TSS region transcription start site region 64636
Prkd2 7 16842902 to 16870461 27559 + protein coding gene protein kinase D2
Tssr64637 7 16842956 to 16842963 7 + TSS region transcription start site region 64637
Tssr64638 7 16842970 to 16843016 46 + TSS region transcription start site region 64638
Tssr64639 7 16843021 to 16843040 19 + TSS region transcription start site region 64639
Tssr64640 7 16843049 to 16843077 28 + TSS region transcription start site region 64640
Tssr64641 7 16843086 to 16843103 17 + TSS region transcription start site region 64641
Tssr64642 7 16843175 to 16843211 36 + TSS region transcription start site region 64642
Tssr64643 7 16844138 to 16844143 5 + TSS region transcription start site region 64643
Tssr64644 7 16845811 to 16845826 15 + TSS region transcription start site region 64644
Cpgi18393 7 16847573 to 16847797 224 CpG island CpG island 18393
Cpgi18394 7 16848705 to 16849046 341 CpG island CpG island 18394
Cpgi18395 7 16858292 to 16858633 341 CpG island CpG island 18395
Cpgi18396 7 16865550 to 16865922 372 CpG island CpG island 18396
Cpgi18397 7 16869506 to 16870062 556 CpG island CpG island 18397
9330104G04Rik 7 16871347 to 16874886 3539 - lincRNA gene RIKEN cDNA 9330104G04 gene
Tssr70770 7 16874365 to 16874396 31 - TSS region transcription start site region 70770
Tssr70771 7 16874845 to 16874889 44 - TSS region transcription start site region 70771
Cpgi18398 7 16874901 to 16875855 954 CpG island CpG island 18398
Tssr64645 7 16875302 to 16875392 90 + TSS region transcription start site region 64645
Dact3 7 16875317 to 16887301 11984 + protein coding gene dishevelled-binding antagonist of beta-catenin 3
Tssr64646 7 16875406 to 16875447 41 + TSS region transcription start site region 64646
Tssr64647 7 16876984 to 16876986 2 + TSS region transcription start site region 64647
Cpgi18399 7 16884991 to 16886573 1582 CpG island CpG island 18399
Tssr64648 7 16886422 to 16886472 50 + TSS region transcription start site region 64648
2700080J24Rik 7 16889406 to 16891067 1661 - unclassified gene RIKEN cDNA 2700080J24 gene
Cpgi18400 7 16891022 to 16891185 163 CpG island CpG island 18400
Tssr64649 7 16891755 to 16891800 45 + TSS region transcription start site region 64649
Gng8 7 16891786 to 16895436 3650 + protein coding gene guanine nucleotide binding protein (G protein), gamma 8
Tssr64650 7 16891824 to 16891851 27 + TSS region transcription start site region 64650
Cpgi18401 7 16891995 to 16892550 555 CpG island CpG island 18401
Tssr64651 7 16893109 to 16893123 14 + TSS region transcription start site region 64651
Tssr64652 7 16893802 to 16893846 44 + TSS region transcription start site region 64652
Cpgi18402 7 16894837 to 16895413 576 CpG island CpG island 18402
Tssr70772 7 16899351 to 16899358 7 - TSS region transcription start site region 70772
D7Mit56 7 16903368 to 16903498 130 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 56
Drsi 7 16903368 to 49509583 32606215 QTL DCC-related Spp1 induction
Abhr3 7 16903498 to 3266568 -13636930 QTL allergen-induced bronchial hyperresponsiveness 3
Tssr64653 7 16905971 to 16906013 42 + TSS region transcription start site region 64653
Tssr64654 7 16906488 to 16906539 51 + TSS region transcription start site region 64654
Ptgir 7 16906490 to 16910905 4415 + protein coding gene prostaglandin I receptor (IP)
Cpgi18403 7 16906884 to 16907610 726 CpG island CpG island 18403
Tssr64655 7 16907024 to 16907033 9 + TSS region transcription start site region 64655
Tssr64656 7 16908055 to 16908088 33 + TSS region transcription start site region 64656
Tssr64657 7 16908716 to 16908735 19 + TSS region transcription start site region 64657