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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:16731345-16848274

42 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr64619	7	16733665 to 16733679	14	+	TSS region	transcription start site region 64619
Tssr64620	7	16734406 to 16734408	2	+	TSS region	transcription start site region 64620
Cpgi18386	7	16738270 to 16738757	487		CpG island	CpG island 18386
Ap2s1	7	16738410 to 16749294	10884	+	protein coding gene	adaptor-related protein complex 2, sigma 1 subunit
Tssr64621	7	16738436 to 16738476	40	+	TSS region	transcription start site region 64621
Tssr64622	7	16749092 to 16749104	12	+	TSS region	transcription start site region 64622
Cpgi18387	7	16771924 to 16772169	245		CpG island	CpG island 18387
Cpgi18388	7	16781012 to 16782647	1635		CpG island	CpG island 18388
Tssr64623	7	16781341 to 16781352	11	+	TSS region	transcription start site region 64623
Slc1a5	7	16781345 to 16798274	16929	+	protein coding gene	solute carrier family 1 (neutral amino acid transporter), member 5
Tssr64624	7	16781359 to 16781376	17	+	TSS region	transcription start site region 64624
Tssr64625	7	16782303 to 16782391	88	+	TSS region	transcription start site region 64625
9530015I06Rik	7	16789016 to 16789324	308		unclassified gene	RIKEN cDNA 9530015I06 gene
Tssr64626	7	16792525 to 16792550	25	+	TSS region	transcription start site region 64626
Tssr64627	7	16793530 to 16793541	11	+	TSS region	transcription start site region 64627
Cpgi18389	7	16795710 to 16796090	380		CpG island	CpG island 18389
Fkrp	7	16809246 to 16816732	7486	-	protein coding gene	fukutin related protein
Cpgi18390	7	16810452 to 16811991	1539		CpG island	CpG island 18390
Tssr70768	7	16815472 to 16815481	9	-	TSS region	transcription start site region 70768
Cpgi18391	7	16815811 to 16817220	1409		CpG island	CpG island 18391
Strn4	7	16815889 to 16840931	25042	+	protein coding gene	striatin, calmodulin binding protein 4
Tssr64628	7	16816273 to 16816286	13	+	TSS region	transcription start site region 64628
Tssr64629	7	16816299 to 16816361	62	+	TSS region	transcription start site region 64629
Tssr70769	7	16816731 to 16816744	13	-	TSS region	transcription start site region 70769
Tssr64630	7	16830840 to 16830861	21	+	TSS region	transcription start site region 64630
Tssr64631	7	16830862 to 16830871	9	+	TSS region	transcription start site region 64631
Tssr64632	7	16830876 to 16830883	7	+	TSS region	transcription start site region 64632
Tssr64633	7	16838124 to 16838141	17	+	TSS region	transcription start site region 64633
Tssr64634	7	16838152 to 16838163	11	+	TSS region	transcription start site region 64634
Tssr64635	7	16838176 to 16838193	17	+	TSS region	transcription start site region 64635
Cpgi18392	7	16842584 to 16843883	1299		CpG island	CpG island 18392
Tssr64636	7	16842896 to 16842954	58	+	TSS region	transcription start site region 64636
Prkd2	7	16842902 to 16870461	27559	+	protein coding gene	protein kinase D2
Tssr64637	7	16842956 to 16842963	7	+	TSS region	transcription start site region 64637
Tssr64638	7	16842970 to 16843016	46	+	TSS region	transcription start site region 64638
Tssr64639	7	16843021 to 16843040	19	+	TSS region	transcription start site region 64639
Tssr64640	7	16843049 to 16843077	28	+	TSS region	transcription start site region 64640
Tssr64641	7	16843086 to 16843103	17	+	TSS region	transcription start site region 64641
Tssr64642	7	16843175 to 16843211	36	+	TSS region	transcription start site region 64642
Tssr64643	7	16844138 to 16844143	5	+	TSS region	transcription start site region 64643
Tssr64644	7	16845811 to 16845826	15	+	TSS region	transcription start site region 64644
Cpgi18393	7	16847573 to 16847797	224		CpG island	CpG island 18393