Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:16707525-16877550

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr64617 7 16714851 to 16714855 4 + TSS region transcription start site region 64617
Gm5586 7 16719116 to 16719910 794 - pseudogene predicted gene 5586
Tssr70767 7 16719925 to 16719940 15 - TSS region transcription start site region 70767
Ceacam9 7 16721929 to 16726110 4181 + protein coding gene carcinoembryonic antigen-related cell adhesion molecule 9
Tssr64618 7 16721954 to 16721959 5 + TSS region transcription start site region 64618
Cpgi18385 7 16723689 to 16723849 160 CpG island CpG island 18385
Tssr64619 7 16733665 to 16733679 14 + TSS region transcription start site region 64619
Tssr64620 7 16734406 to 16734408 2 + TSS region transcription start site region 64620
Cpgi18386 7 16738270 to 16738757 487 CpG island CpG island 18386
Ap2s1 7 16738410 to 16749294 10884 + protein coding gene adaptor-related protein complex 2, sigma 1 subunit
Tssr64621 7 16738436 to 16738476 40 + TSS region transcription start site region 64621
Tssr64622 7 16749092 to 16749104 12 + TSS region transcription start site region 64622
Cpgi18387 7 16771924 to 16772169 245 CpG island CpG island 18387
Cpgi18388 7 16781012 to 16782647 1635 CpG island CpG island 18388
Tssr64623 7 16781341 to 16781352 11 + TSS region transcription start site region 64623
Slc1a5 7 16781345 to 16798274 16929 + protein coding gene solute carrier family 1 (neutral amino acid transporter), member 5
Tssr64624 7 16781359 to 16781376 17 + TSS region transcription start site region 64624
Tssr64625 7 16782303 to 16782391 88 + TSS region transcription start site region 64625
9530015I06Rik 7 16789016 to 16789324 308 unclassified gene RIKEN cDNA 9530015I06 gene
Tssr64626 7 16792525 to 16792550 25 + TSS region transcription start site region 64626
Tssr64627 7 16793530 to 16793541 11 + TSS region transcription start site region 64627
Cpgi18389 7 16795710 to 16796090 380 CpG island CpG island 18389
Fkrp 7 16809246 to 16816732 7486 - protein coding gene fukutin related protein
Cpgi18390 7 16810452 to 16811991 1539 CpG island CpG island 18390
Tssr70768 7 16815472 to 16815481 9 - TSS region transcription start site region 70768
Cpgi18391 7 16815811 to 16817220 1409 CpG island CpG island 18391
Strn4 7 16815889 to 16840931 25042 + protein coding gene striatin, calmodulin binding protein 4
Tssr64628 7 16816273 to 16816286 13 + TSS region transcription start site region 64628
Tssr64629 7 16816299 to 16816361 62 + TSS region transcription start site region 64629
Tssr70769 7 16816731 to 16816744 13 - TSS region transcription start site region 70769
Tssr64630 7 16830840 to 16830861 21 + TSS region transcription start site region 64630
Tssr64631 7 16830862 to 16830871 9 + TSS region transcription start site region 64631
Tssr64632 7 16830876 to 16830883 7 + TSS region transcription start site region 64632
Tssr64633 7 16838124 to 16838141 17 + TSS region transcription start site region 64633
Tssr64634 7 16838152 to 16838163 11 + TSS region transcription start site region 64634
Tssr64635 7 16838176 to 16838193 17 + TSS region transcription start site region 64635
Cpgi18392 7 16842584 to 16843883 1299 CpG island CpG island 18392
Tssr64636 7 16842896 to 16842954 58 + TSS region transcription start site region 64636
Prkd2 7 16842902 to 16870461 27559 + protein coding gene protein kinase D2
Tssr64637 7 16842956 to 16842963 7 + TSS region transcription start site region 64637
Tssr64638 7 16842970 to 16843016 46 + TSS region transcription start site region 64638
Tssr64639 7 16843021 to 16843040 19 + TSS region transcription start site region 64639
Tssr64640 7 16843049 to 16843077 28 + TSS region transcription start site region 64640
Tssr64641 7 16843086 to 16843103 17 + TSS region transcription start site region 64641
Tssr64642 7 16843175 to 16843211 36 + TSS region transcription start site region 64642
Tssr64643 7 16844138 to 16844143 5 + TSS region transcription start site region 64643
Tssr64644 7 16845811 to 16845826 15 + TSS region transcription start site region 64644
Cpgi18393 7 16847573 to 16847797 224 CpG island CpG island 18393
Cpgi18394 7 16848705 to 16849046 341 CpG island CpG island 18394
Cpgi18395 7 16858292 to 16858633 341 CpG island CpG island 18395
Cpgi18396 7 16865550 to 16865922 372 CpG island CpG island 18396
Cpgi18397 7 16869506 to 16870062 556 CpG island CpG island 18397
9330104G04Rik 7 16871347 to 16874886 3539 - lincRNA gene RIKEN cDNA 9330104G04 gene
Tssr70770 7 16874365 to 16874396 31 - TSS region transcription start site region 70770
Tssr70771 7 16874845 to 16874889 44 - TSS region transcription start site region 70771
Cpgi18398 7 16874901 to 16875855 954 CpG island CpG island 18398
Tssr64645 7 16875302 to 16875392 90 + TSS region transcription start site region 64645
Dact3 7 16875317 to 16887301 11984 + protein coding gene dishevelled-binding antagonist of beta-catenin 3
Tssr64646 7 16875406 to 16875447 41 + TSS region transcription start site region 64646
Tssr64647 7 16876984 to 16876986 2 + TSS region transcription start site region 64647