MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 7:16412779-16495490

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Zc3h4	7	16400910 to 16437696	36786	+	protein coding gene	zinc finger CCCH-type containing 4
5430402M21Rik	7	16412062 to 16413694	1632		unclassified gene	RIKEN cDNA 5430402M21 gene
Gm45510	7	16413908 to 16416621	2713	-	antisense lncRNA gene	predicted gene 45510
Tssr64611	7	16415671 to 16415675	4	+	TSS region	transcription start site region 64611
Tssr64612	7	16420953 to 16420996	43	+	TSS region	transcription start site region 64612
Cpgi18377	7	16452774 to 16453537	763		CpG island	CpG island 18377
Tmem160	7	16452779 to 16455490	2711	+	protein coding gene	transmembrane protein 160
Tssr64613	7	16452927 to 16452968	41	+	TSS region	transcription start site region 64613
Tssr64614	7	16453024 to 16453031	7	+	TSS region	transcription start site region 64614
Cpgi18378	7	16455009 to 16455287	278		CpG island	CpG island 18378
Npas1	7	16455718 to 16476816	21098	-	protein coding gene	neuronal PAS domain protein 1
Cpgi18379	7	16460549 to 16460924	375		CpG island	CpG island 18379
Cpgi18380	7	16463262 to 16463526	264		CpG island	CpG island 18380
n-R5s151	7	16471813 to 16471931	118	+	rRNA gene	nuclear encoded rRNA 5S 151
Cpgi18381	7	16474473 to 16474947	474		CpG island	CpG island 18381
Cpgi18382	7	16475210 to 16476968	1758		CpG island	CpG island 18382
Tssr70748	7	16476765 to 16476792	27	-	TSS region	transcription start site region 70748
Arhgap35	7	16494473 to 16615244	120771	-	protein coding gene	Rho GTPase activating protein 35
Tssr70749	7	16494727 to 16494731	4	-	TSS region	transcription start site region 70749