Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:16390327-16610330

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi18375 7 16399507 to 16401607 2100 CpG island CpG island 18375
Tssr64603 7 16399592 to 16399629 37 + TSS region transcription start site region 64603
Tssr64604 7 16400030 to 16400061 31 + TSS region transcription start site region 64604
Tssr64605 7 16400065 to 16400078 13 + TSS region transcription start site region 64605
Tssr64606 7 16400107 to 16400118 11 + TSS region transcription start site region 64606
Tssr64607 7 16400257 to 16400301 44 + TSS region transcription start site region 64607
Tssr64608 7 16400304 to 16400331 27 + TSS region transcription start site region 64608
Tssr2083 7 16400893 to 16400932 39 + TSS region transcription start site region 2083
Zc3h4 7 16400910 to 16437696 36786 + protein coding gene zinc finger CCCH-type containing 4
Tssr70747 7 16401132 to 16401155 23 - TSS region transcription start site region 70747
Tssr64609 7 16401187 to 16401233 46 + TSS region transcription start site region 64609
Tssr64610 7 16401268 to 16401283 15 + TSS region transcription start site region 64610
Cpgi18376 7 16402079 to 16402396 317 CpG island CpG island 18376
Gm45508 7 16403964 to 16404262 298 - unclassified gene predicted gene 45508
Gm45509 7 16406755 to 16407983 1228 - lincRNA gene predicted gene 45509
5430402M21Rik 7 16412062 to 16413694 1632 unclassified gene RIKEN cDNA 5430402M21 gene
Gm45510 7 16413908 to 16416621 2713 - antisense lncRNA gene predicted gene 45510
Tssr64611 7 16415671 to 16415675 4 + TSS region transcription start site region 64611
Tssr64612 7 16420953 to 16420996 43 + TSS region transcription start site region 64612
Cpgi18377 7 16452774 to 16453537 763 CpG island CpG island 18377
Tmem160 7 16452779 to 16455490 2711 + protein coding gene transmembrane protein 160
Tssr64613 7 16452927 to 16452968 41 + TSS region transcription start site region 64613
Tssr64614 7 16453024 to 16453031 7 + TSS region transcription start site region 64614
Cpgi18378 7 16455009 to 16455287 278 CpG island CpG island 18378
Npas1 7 16455718 to 16476816 21098 - protein coding gene neuronal PAS domain protein 1
Cpgi18379 7 16460549 to 16460924 375 CpG island CpG island 18379
Cpgi18380 7 16463262 to 16463526 264 CpG island CpG island 18380
n-R5s151 7 16471813 to 16471931 118 + rRNA gene nuclear encoded rRNA 5S 151
Cpgi18381 7 16474473 to 16474947 474 CpG island CpG island 18381
Cpgi18382 7 16475210 to 16476968 1758 CpG island CpG island 18382
Tssr70748 7 16476765 to 16476792 27 - TSS region transcription start site region 70748
Arhgap35 7 16494473 to 16615244 120771 - protein coding gene Rho GTPase activating protein 35
Tssr70749 7 16494727 to 16494731 4 - TSS region transcription start site region 70749
Tssr70750 7 16497803 to 16497820 17 - TSS region transcription start site region 70750
Gm17826 7 16498732 to 16499529 797 + pseudogene predicted gene, 17826
Tssr70751 7 16500327 to 16500330 3 - TSS region transcription start site region 70751
Gm17981 7 16514406 to 16515093 687 - pseudogene predicted gene, 17981
Tssr70752 7 16604500 to 16604506 6 - TSS region transcription start site region 70752
D7Mit342 7 16606254 to 16606419 165 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 342