Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:16248908-16581621

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95 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
C5ar1 7 16246743 to 16259540 12797 - protein coding gene complement component 5a receptor 1
Cpgi18365 7 16248070 to 16248970 900 CpG island CpG island 18365
Tssr70716 7 16257525 to 16257528 3 - TSS region transcription start site region 70716
Tssr70717 7 16257860 to 16257894 34 - TSS region transcription start site region 70717
Tssr2081 7 16258042 to 16258066 24 + TSS region transcription start site region 2081
Tssr70718 7 16259185 to 16259201 16 - TSS region transcription start site region 70718
Cpgi18366 7 16271989 to 16274450 2461 CpG island CpG island 18366
Inafm1 7 16272013 to 16273617 1604 - protein coding gene InaF motif containing 1
Tssr70719 7 16273260 to 16273331 71 - TSS region transcription start site region 70719
Tssr70720 7 16273912 to 16273926 14 - TSS region transcription start site region 70720
Tssr70721 7 16273927 to 16273960 33 - TSS region transcription start site region 70721
Ccdc9 7 16274042 to 16286795 12753 - protein coding gene coiled-coil domain containing 9
Tssr70722 7 16285426 to 16285440 14 - TSS region transcription start site region 70722
Tssr70723 7 16285454 to 16285479 25 - TSS region transcription start site region 70723
Tssr70724 7 16285992 to 16286005 13 - TSS region transcription start site region 70724
Tssr70725 7 16286010 to 16286034 24 - TSS region transcription start site region 70725
Cpgi18367 7 16286171 to 16286909 738 CpG island CpG island 18367
Tssr70726 7 16286744 to 16286788 44 - TSS region transcription start site region 70726
Tssr70727 7 16286795 to 16286810 15 - TSS region transcription start site region 70727
Cpgi18368 7 16294862 to 16295976 1114 CpG island CpG island 18368
Tssr64594 7 16295119 to 16295153 34 + TSS region transcription start site region 64594
Tssr70728 7 16295438 to 16295452 14 - TSS region transcription start site region 70728
Tssr70729 7 16295459 to 16295486 27 - TSS region transcription start site region 70729
Tssr64595 7 16295838 to 16295857 19 + TSS region transcription start site region 64595
Cpgi18369 7 16296874 to 16297202 328 CpG island CpG island 18369
Cpgi18370 7 16299535 to 16300252 717 CpG island CpG island 18370
Tssr64596 7 16299887 to 16299904 17 + TSS region transcription start site region 64596
Tssr64597 7 16308330 to 16308361 31 + TSS region transcription start site region 64597
Bbc3 7 16308393 to 16318205 9812 + protein coding gene BCL2 binding component 3
Tssr64598 7 16308745 to 16308761 16 + TSS region transcription start site region 64598
Cpgi18371 7 16308750 to 16310995 2245 CpG island CpG island 18371
Tssr70730 7 16309340 to 16309370 30 - TSS region transcription start site region 70730
Tssr70731 7 16309378 to 16309390 12 - TSS region transcription start site region 70731
Tssr64599 7 16309577 to 16309641 64 + TSS region transcription start site region 64599
Tssr70732 7 16310071 to 16310098 27 - TSS region transcription start site region 70732
Tssr64600 7 16310412 to 16310444 32 + TSS region transcription start site region 64600
Tssr70733 7 16311312 to 16311335 23 - TSS region transcription start site region 70733
Cpgi18372 7 16311919 to 16313152 1233 CpG island CpG island 18372
Tssr70734 7 16312408 to 16312425 17 - TSS region transcription start site region 70734
Tssr70735 7 16312447 to 16312470 23 - TSS region transcription start site region 70735
Cpgi18373 7 16313547 to 16314512 965 CpG island CpG island 18373
Tssr64601 7 16313615 to 16313675 60 + TSS region transcription start site region 64601
Tssr70736 7 16313969 to 16313987 18 - TSS region transcription start site region 70736
Tssr70737 7 16314034 to 16314049 15 - TSS region transcription start site region 70737
Tssr70738 7 16314053 to 16314063 10 - TSS region transcription start site region 70738
Tssr64602 7 16315601 to 16315606 5 + TSS region transcription start site region 64602
Sae1 7 16320234 to 16387806 67572 - protein coding gene SUMO1 activating enzyme subunit 1
Tssr70739 7 16366451 to 16366462 11 - TSS region transcription start site region 70739
Tssr70740 7 16368692 to 16368702 10 - TSS region transcription start site region 70740
Tssr70741 7 16370384 to 16370417 33 - TSS region transcription start site region 70741
Tssr70742 7 16372192 to 16372221 29 - TSS region transcription start site region 70742
Tssr2082 7 16372228 to 16372246 18 - TSS region transcription start site region 2082
D7Ertd661e 7 16381538 to 16381746 208 DNA segment DNA segment, Chr 7, ERATO Doi 661, expressed
Cpgi18374 7 16387215 to 16388044 829 CpG island CpG island 18374
Tssr70743 7 16387757 to 16387773 16 - TSS region transcription start site region 70743
Tssr70744 7 16387778 to 16387788 10 - TSS region transcription start site region 70744
Tssr70745 7 16387791 to 16387840 49 - TSS region transcription start site region 70745
Tssr70746 7 16387853 to 16387858 5 - TSS region transcription start site region 70746
Cpgi18375 7 16399507 to 16401607 2100 CpG island CpG island 18375
Tssr64603 7 16399592 to 16399629 37 + TSS region transcription start site region 64603
Tssr64604 7 16400030 to 16400061 31 + TSS region transcription start site region 64604
Tssr64605 7 16400065 to 16400078 13 + TSS region transcription start site region 64605
Tssr64606 7 16400107 to 16400118 11 + TSS region transcription start site region 64606
Tssr64607 7 16400257 to 16400301 44 + TSS region transcription start site region 64607
Tssr64608 7 16400304 to 16400331 27 + TSS region transcription start site region 64608
Tssr2083 7 16400893 to 16400932 39 + TSS region transcription start site region 2083
Zc3h4 7 16400910 to 16437696 36786 + protein coding gene zinc finger CCCH-type containing 4
Tssr70747 7 16401132 to 16401155 23 - TSS region transcription start site region 70747
Tssr64609 7 16401187 to 16401233 46 + TSS region transcription start site region 64609
Tssr64610 7 16401268 to 16401283 15 + TSS region transcription start site region 64610
Cpgi18376 7 16402079 to 16402396 317 CpG island CpG island 18376
Gm45508 7 16403964 to 16404262 298 - unclassified gene predicted gene 45508
Gm45509 7 16406755 to 16407983 1228 - lincRNA gene predicted gene 45509
5430402M21Rik 7 16412062 to 16413694 1632 unclassified gene RIKEN cDNA 5430402M21 gene
Gm45510 7 16413908 to 16416621 2713 - antisense lncRNA gene predicted gene 45510
Tssr64611 7 16415671 to 16415675 4 + TSS region transcription start site region 64611
Tssr64612 7 16420953 to 16420996 43 + TSS region transcription start site region 64612
Cpgi18377 7 16452774 to 16453537 763 CpG island CpG island 18377
Tmem160 7 16452779 to 16455490 2711 + protein coding gene transmembrane protein 160
Tssr64613 7 16452927 to 16452968 41 + TSS region transcription start site region 64613
Tssr64614 7 16453024 to 16453031 7 + TSS region transcription start site region 64614
Cpgi18378 7 16455009 to 16455287 278 CpG island CpG island 18378
Npas1 7 16455718 to 16476816 21098 - protein coding gene neuronal PAS domain protein 1
Cpgi18379 7 16460549 to 16460924 375 CpG island CpG island 18379
Cpgi18380 7 16463262 to 16463526 264 CpG island CpG island 18380
n-R5s151 7 16471813 to 16471931 118 + rRNA gene nuclear encoded rRNA 5S 151
Cpgi18381 7 16474473 to 16474947 474 CpG island CpG island 18381
Cpgi18382 7 16475210 to 16476968 1758 CpG island CpG island 18382
Tssr70748 7 16476765 to 16476792 27 - TSS region transcription start site region 70748
Arhgap35 7 16494473 to 16615244 120771 - protein coding gene Rho GTPase activating protein 35
Tssr70749 7 16494727 to 16494731 4 - TSS region transcription start site region 70749
Tssr70750 7 16497803 to 16497820 17 - TSS region transcription start site region 70750
Gm17826 7 16498732 to 16499529 797 + pseudogene predicted gene, 17826
Tssr70751 7 16500327 to 16500330 3 - TSS region transcription start site region 70751
Gm17981 7 16514406 to 16515093 687 - pseudogene predicted gene, 17981