Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:15920672-16097921

54 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Selenow	7	15917208 to 15922371	5163	-	protein coding gene	selenoprotein W
Tssr70680	7	15920667 to 15920692	25	-	TSS region	transcription start site region 70680
Tssr70681	7	15920778 to 15920791	13	-	TSS region	transcription start site region 70681
Cpgi18341	7	15921933 to 15922699	766		CpG island	CpG island 18341
Tssr70682	7	15922302 to 15922313	11	-	TSS region	transcription start site region 70682
Tssr70683	7	15922335 to 15922357	22	-	TSS region	transcription start site region 70683
Tssr70684	7	15922361 to 15922378	17	-	TSS region	transcription start site region 70684
Nop53	7	15937835 to 15946108	8273	-	protein coding gene	NOP53 ribosome biogenesis factor
Snord23	7	15938762 to 15938860	98	-	snoRNA gene	small nucleolar RNA, C/D box 23
Cpgi18342	7	15945566 to 15946252	686		CpG island	CpG island 18342
Tssr70685	7	15945784 to 15945808	24	-	TSS region	transcription start site region 70685
Tssr70686	7	15946023 to 15946034	11	-	TSS region	transcription start site region 70686
Tssr70687	7	15946057 to 15946069	12	-	TSS region	transcription start site region 70687
Tssr70688	7	15946070 to 15946105	35	-	TSS region	transcription start site region 70688
Gm24576	7	15946248 to 15946495	247	+	lncRNA gene	predicted gene, 24576
Ehd2	7	15946963 to 15967535	20572	-	protein coding gene	EH-domain containing 2
Cpgi18343	7	15948412 to 15948826	414		CpG island	CpG island 18343
Tssr70689	7	15950027 to 15950043	16	-	TSS region	transcription start site region 70689
Tssr70690	7	15950088 to 15950092	4	-	TSS region	transcription start site region 70690
Tssr70691	7	15950282 to 15950321	39	-	TSS region	transcription start site region 70691
Cpgi18344	7	15950383 to 15950745	362		CpG island	CpG island 18344
Cpgi18345	7	15957460 to 15957937	477		CpG island	CpG island 18345
Tssr70692	7	15959552 to 15959566	14	-	TSS region	transcription start site region 70692
Tssr70693	7	15959784 to 15959795	11	-	TSS region	transcription start site region 70693
Tssr70694	7	15959818 to 15959832	14	-	TSS region	transcription start site region 70694
Cpgi18346	7	15963936 to 15964292	356		CpG island	CpG island 18346
Tssr70695	7	15964372 to 15964427	55	-	TSS region	transcription start site region 70695
Cpgi18347	7	15967335 to 15967637	302		CpG island	CpG island 18347
Tssr70696	7	15967470 to 15967484	14	-	TSS region	transcription start site region 70696
Bicra	7	15970672 to 16047921	77249	-	protein coding gene	BRD4 interacting chromatin remodeling complex associated protein
Cpgi18348	7	15971940 to 15972739	799		CpG island	CpG island 18348
Gm38948	7	15980710 to 15984800	4090	+	lincRNA gene	predicted gene, 38948
Tssr64567	7	16004684 to 16004696	12	+	TSS region	transcription start site region 64567
Tssr70697	7	16018238 to 16018251	13	-	TSS region	transcription start site region 70697
Tssr70698	7	16044493 to 16044498	5	-	TSS region	transcription start site region 70698
Cpgi18349	7	16046523 to 16049093	2570		CpG island	CpG island 18349
Gm32059	7	16046582 to 16047666	1084	+	lncRNA gene	predicted gene, 32059
Tssr64568	7	16046602 to 16046617	15	+	TSS region	transcription start site region 64568
Tssr70699	7	16047638 to 16047643	5	-	TSS region	transcription start site region 70699
Tssr70700	7	16047912 to 16047947	35	-	TSS region	transcription start site region 70700
Tssr70701	7	16048053 to 16048082	29	-	TSS region	transcription start site region 70701
Tssr70702	7	16048111 to 16048123	12	-	TSS region	transcription start site region 70702
Tssr64569	7	16048380 to 16048447	67	+	TSS region	transcription start site region 64569
2010004M13Rik	7	16048444 to 16049057	613		unclassified gene	RIKEN cDNA 2010004M13 gene
Cpgi18350	7	16052709 to 16053104	395		CpG island	CpG island 18350
Tssr70703	7	16052807 to 16052827	20	-	TSS region	transcription start site region 70703
Cpgi18351	7	16061307 to 16062278	971		CpG island	CpG island 18351
Tssr64570	7	16061780 to 16061793	13	+	TSS region	transcription start site region 64570
Tssr64571	7	16061810 to 16061820	10	+	TSS region	transcription start site region 64571
Zfp541	7	16061814 to 16096334	34520	+	protein coding gene	zinc finger protein 541
Tssr64572	7	16061840 to 16061867	27	+	TSS region	transcription start site region 64572
Tssr64573	7	16061868 to 16061886	18	+	TSS region	transcription start site region 64573
Tssr64574	7	16061901 to 16061913	12	+	TSS region	transcription start site region 64574
Tssr64575	7	16062739 to 16062743	4	+	TSS region	transcription start site region 64575