Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:15247188-16038208

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85 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Obox4-ps22 7 15252612 to 15254325 1713 + pseudogene oocyte specific homeobox 4, pseudogene 22
Obox4-ps23 7 15263943 to 15265656 1713 + pseudogene oocyte specific homeobox 4, pseudogene 23
Mrip-ps 7 15288251 to 15289190 939 - pseudogene Mom radiation induced polyposis, pseudogene
Obox3-ps5 7 15293949 to 15295548 1599 - pseudogene oocyte specific homeobox 3, pseudogene 5
Obox4-ps24 7 15307039 to 15308054 1015 - pseudogene oocyte specific homeobox 4, pseudogene 24
Gtpbp4-ps5 7 15319972 to 15320260 288 - pseudogene GTP binding protein 4, pseudogene 5
Obox4-ps25 7 15333435 to 15333644 209 - pseudogene oocyte specific homeobox 4, pseudogene 25
Obox4-ps26 7 15343518 to 15344241 723 + pseudogene oocyte specific homeobox 4, pseudogene 26
Ranbp2-ps7 7 15369746 to 15370129 383 - pseudogene RAN binding protein 2, pseudogene 7
Obox2 7 15388851 to 15398545 9694 + protein coding gene oocyte specific homeobox 2
Ranbp2-ps8 7 15408520 to 15408864 344 - pseudogene RAN binding protein 2, pseudogene 8
Obox4-ps27 7 15431617 to 15433379 1762 + pseudogene oocyte specific homeobox 4, pseudogene 27
Obox4-ps28 7 15442953 to 15444715 1762 + pseudogene oocyte specific homeobox 4, pseudogene 28
Obox4-ps29 7 15454323 to 15456033 1710 + pseudogene oocyte specific homeobox 4, pseudogene 29
Obox3-ps6 7 15480174 to 15481781 1607 - pseudogene oocyte specific homeobox 3, pseudogene 6
Obox4-ps30 7 15501820 to 15502548 728 + pseudogene oocyte specific homeobox 4, pseudogene 30
Ranbp2-ps9 7 15528046 to 15528427 381 - pseudogene RAN binding protein 2, pseudogene 9
Obox1 7 15547257 to 15556846 9589 + protein coding gene oocyte specific homeobox 1
Ranbp2-ps10 7 15566485 to 15566869 384 - pseudogene RAN binding protein 2, pseudogene 10
Obox4-ps31 7 15589653 to 15591360 1707 + pseudogene oocyte specific homeobox 4, pseudogene 31
Gm25354 7 15593231 to 15593335 104 + snRNA gene predicted gene, 25354
Obox3 7 15625306 to 15639777 14471 - protein coding gene oocyte specific homeobox 3
Obox4-ps32 7 15642188 to 15643208 1020 - pseudogene oocyte specific homeobox 4, pseudogene 32
Gtpbp4-ps6 7 15653333 to 15653624 291 - pseudogene GTP binding protein 4, pseudogene 6
Obox4-ps33 7 15691650 to 15693360 1710 + pseudogene oocyte specific homeobox 4, pseudogene 33
Gm23714 7 15695213 to 15695317 104 + snRNA gene predicted gene, 23714
Obox4-ps34 7 15719766 to 15720132 366 + pseudogene oocyte specific homeobox 4, pseudogene 34
Ranbp2-ps11 7 15725926 to 15726312 386 - pseudogene RAN binding protein 2, pseudogene 11
Obox5 7 15750370 to 15759274 8904 + protein coding gene oocyte specific homeobox 5
Ranbp2-ps12 7 15766814 to 15767199 385 - pseudogene RAN binding protein 2, pseudogene 12
Gtpbp4-ps7 7 15787864 to 15788160 296 - pseudogene GTP binding protein 4, pseudogene 7
Obox4-ps35 7 15820167 to 15825815 5648 - pseudogene oocyte specific homeobox 4, pseudogene 35
Obox6 7 15833250 to 15839679 6429 - protein coding gene oocyte specific homeobox 6
Crx 7 15865947 to 15879955 14008 - protein coding gene cone-rod homeobox
Tssr70676 7 15873187 to 15873194 7 - TSS region transcription start site region 70676
Tssr70677 7 15879880 to 15879900 20 - TSS region transcription start site region 70677
Tssr64557 7 15881621 to 15881630 9 + TSS region transcription start site region 64557
Tssr64558 7 15881646 to 15881668 22 + TSS region transcription start site region 64558
Tssr64559 7 15881681 to 15881686 5 + TSS region transcription start site region 64559
Tssr64560 7 15881690 to 15881693 3 + TSS region transcription start site region 64560
Tssr64561 7 15881696 to 15881715 19 + TSS region transcription start site region 64561
116J6.1 7 15881700 to 15881921 221 DNA segment DNA segment, 116J6.1
Crxos 7 15882617 to 15904020 21403 + protein coding gene cone-rod homeobox, opposite strand
Tssr64562 7 15885143 to 15885155 12 + TSS region transcription start site region 64562
Tssr64563 7 15886164 to 15886173 9 + TSS region transcription start site region 64563
Tssr64564 7 15896165 to 15896176 11 + TSS region transcription start site region 64564
Tssr64565 7 15901656 to 15901665 9 + TSS region transcription start site region 64565
Ass-ps1 7 15906681 to 15907592 911 + pseudogene argininosuccinate synthetase pseudogene 1
Selenow 7 15917208 to 15922371 5163 - protein coding gene selenoprotein W
Tssr70678 7 15917337 to 15917433 96 - TSS region transcription start site region 70678
Tssr64566 7 15917349 to 15917382 33 + TSS region transcription start site region 64566
Tssr70679 7 15920099 to 15920114 15 - TSS region transcription start site region 70679
Tssr70680 7 15920667 to 15920692 25 - TSS region transcription start site region 70680
Tssr70681 7 15920778 to 15920791 13 - TSS region transcription start site region 70681
Cpgi18341 7 15921933 to 15922699 766 CpG island CpG island 18341
Tssr70682 7 15922302 to 15922313 11 - TSS region transcription start site region 70682
Tssr70683 7 15922335 to 15922357 22 - TSS region transcription start site region 70683
Tssr70684 7 15922361 to 15922378 17 - TSS region transcription start site region 70684
Nop53 7 15937835 to 15946108 8273 - protein coding gene NOP53 ribosome biogenesis factor
Snord23 7 15938762 to 15938860 98 - snoRNA gene small nucleolar RNA, C/D box 23
Cpgi18342 7 15945566 to 15946252 686 CpG island CpG island 18342
Tssr70685 7 15945784 to 15945808 24 - TSS region transcription start site region 70685
Tssr70686 7 15946023 to 15946034 11 - TSS region transcription start site region 70686
Tssr70687 7 15946057 to 15946069 12 - TSS region transcription start site region 70687
Tssr70688 7 15946070 to 15946105 35 - TSS region transcription start site region 70688
Gm24576 7 15946248 to 15946495 247 + lncRNA gene predicted gene, 24576
Ehd2 7 15946963 to 15967535 20572 - protein coding gene EH-domain containing 2
Cpgi18343 7 15948412 to 15948826 414 CpG island CpG island 18343
Tssr70689 7 15950027 to 15950043 16 - TSS region transcription start site region 70689
Tssr70690 7 15950088 to 15950092 4 - TSS region transcription start site region 70690
Tssr70691 7 15950282 to 15950321 39 - TSS region transcription start site region 70691
Cpgi18344 7 15950383 to 15950745 362 CpG island CpG island 18344
Cpgi18345 7 15957460 to 15957937 477 CpG island CpG island 18345
Tssr70692 7 15959552 to 15959566 14 - TSS region transcription start site region 70692
Tssr70693 7 15959784 to 15959795 11 - TSS region transcription start site region 70693
Tssr70694 7 15959818 to 15959832 14 - TSS region transcription start site region 70694
Cpgi18346 7 15963936 to 15964292 356 CpG island CpG island 18346
Tssr70695 7 15964372 to 15964427 55 - TSS region transcription start site region 70695
Cpgi18347 7 15967335 to 15967637 302 CpG island CpG island 18347
Tssr70696 7 15967470 to 15967484 14 - TSS region transcription start site region 70696
Bicra 7 15970672 to 16047921 77249 - protein coding gene BRD4 interacting chromatin remodeling complex associated protein
Cpgi18348 7 15971940 to 15972739 799 CpG island CpG island 18348
Gm38948 7 15980710 to 15984800 4090 + lincRNA gene predicted gene, 38948
Tssr64567 7 16004684 to 16004696 12 + TSS region transcription start site region 64567
Tssr70697 7 16018238 to 16018251 13 - TSS region transcription start site region 70697