MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 7:144498639-144608650

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16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ppfia1	7	144476758 to 144553729	76971	-	protein coding gene	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
Tssr75990	7	144520671 to 144520688	17	-	TSS region	transcription start site region 75990
Gm35626	7	144552798 to 144554487	1689	+	pseudogene	predicted gene, 35626
Cpgi19997	7	144553198 to 144554290	1092		CpG island	CpG island 19997
Tssr75991	7	144553639 to 144553650	11	-	TSS region	transcription start site region 75991
Tssr75992	7	144553657 to 144553757	100	-	TSS region	transcription start site region 75992
Tssr70347	7	144553940 to 144553949	9	+	TSS region	transcription start site region 70347
Faddos	7	144567355 to 144581512	14157	+	antisense lncRNA gene	Fas (TNFRSF6)-associated via death domain, opposite strand
Tssr75993	7	144569900 to 144569903	3	-	TSS region	transcription start site region 75993
Fadd	7	144578323 to 144582436	4113	-	protein coding gene	Fas (TNFRSF6)-associated via death domain
Cpgi19998	7	144581640 to 144582734	1094		CpG island	CpG island 19998
Tssr70348	7	144582119 to 144582174	55	+	TSS region	transcription start site region 70348
Tssr75994	7	144582392 to 144582454	62	-	TSS region	transcription start site region 75994
Tssr75995	7	144582457 to 144582474	17	-	TSS region	transcription start site region 75995
Ano1	7	144588549 to 144751974	163425	-	protein coding gene	anoctamin 1, calcium activated chloride channel
D7Mit293	7	144602987 to 144603107	120		DNA segment	DNA segment, Chr 7, Massachusetts Institute of Technology 293