Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:144453280-144903988

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adbg1 7 119094158 to 144844577 25750419 QTL adult body growth 1
Cttn 7 144435733 to 144471009 35276 - protein coding gene cortactin
Gm14376 7 144469533 to 144469993 460 - sense intronic lncRNA gene predicted gene 14376
Cpgi19996 7 144470070 to 144471029 959 CpG island CpG island 19996
Tssr75989 7 144470714 to 144470770 56 - TSS region transcription start site region 75989
Ppfia1 7 144476758 to 144553729 76971 - protein coding gene protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
Tssr75990 7 144520671 to 144520688 17 - TSS region transcription start site region 75990
Gm35626 7 144552798 to 144554487 1689 + pseudogene predicted gene, 35626
Cpgi19997 7 144553198 to 144554290 1092 CpG island CpG island 19997
Tssr75991 7 144553639 to 144553650 11 - TSS region transcription start site region 75991
Tssr75992 7 144553657 to 144553757 100 - TSS region transcription start site region 75992
Tssr70347 7 144553940 to 144553949 9 + TSS region transcription start site region 70347
Faddos 7 144567355 to 144581512 14157 + antisense lncRNA gene Fas (TNFRSF6)-associated via death domain, opposite strand
Tssr75993 7 144569900 to 144569903 3 - TSS region transcription start site region 75993
Fadd 7 144578323 to 144582436 4113 - protein coding gene Fas (TNFRSF6)-associated via death domain
Cpgi19998 7 144581640 to 144582734 1094 CpG island CpG island 19998
Tssr70348 7 144582119 to 144582174 55 + TSS region transcription start site region 70348
Tssr75994 7 144582392 to 144582454 62 - TSS region transcription start site region 75994
Tssr75995 7 144582457 to 144582474 17 - TSS region transcription start site region 75995
Ano1 7 144588549 to 144751974 163425 - protein coding gene anoctamin 1, calcium activated chloride channel
D7Mit293 7 144602987 to 144603107 120 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 293
D7Mit223 7 144609872 to 144609977 105 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 223
Cpgi19999 7 144677902 to 144678074 172 CpG island CpG island 19999
Cpgi20000 7 144678280 to 144678988 708 CpG island CpG island 20000
Tssr75996 7 144678775 to 144678839 64 - TSS region transcription start site region 75996
Tssr75997 7 144678851 to 144678908 57 - TSS region transcription start site region 75997
Cpgi20001 7 144738191 to 144738760 569 CpG island CpG island 20001
Tssr75998 7 144738492 to 144738508 16 - TSS region transcription start site region 75998
Tssr75999 7 144738520 to 144738597 77 - TSS region transcription start site region 75999
D930030F02Rik 7 144741614 to 144770512 28898 + lncRNA gene RIKEN cDNA D930030F02 gene
Tssr70349 7 144742057 to 144742069 12 + TSS region transcription start site region 70349
Tssr70350 7 144742075 to 144742083 8 + TSS region transcription start site region 70350
Tssr70351 7 144742087 to 144742099 12 + TSS region transcription start site region 70351
Tssr70352 7 144742109 to 144742116 7 + TSS region transcription start site region 70352
Gm44930 7 144742113 to 144750008 7895 + antisense lncRNA gene predicted gene 44930
Tssr76000 7 144751968 to 144752007 39 - TSS region transcription start site region 76000
Tssr76001 7 144752024 to 144752027 3 - TSS region transcription start site region 76001
D7Mit259 7 144757504 to 144757647 143 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 259
Pbwg3 7 144757504 to 144757647 143 QTL postnatal body weight growth 3
Gm10152 7 144763139 to 144764482 1343 + unclassified gene predicted gene 10152
Gm44929 7 144764763 to 144770571 5808 + lincRNA gene predicted gene 44929
Tssr76002 7 144778932 to 144778936 4 - TSS region transcription start site region 76002
Gm34964 7 144787041 to 144791808 4767 - lincRNA gene predicted gene, 34964
Gm9711 7 144791996 to 144792322 326 + pseudogene predicted gene 9711
Tssr70353 7 144837479 to 144837509 30 + TSS region transcription start site region 70353
Cpgi20002 7 144837857 to 144840009 2152 CpG island CpG island 20002
Tssr70354 7 144837861 to 144837877 16 + TSS region transcription start site region 70354
Tssr70355 7 144838053 to 144838079 26 + TSS region transcription start site region 70355
Fgf3 7 144838083 to 144844436 6353 + protein coding gene fibroblast growth factor 3
Tssr70356 7 144838590 to 144838614 24 + TSS region transcription start site region 70356
Sluc8 7 144844414 to 144844577 163 QTL susceptibility to lung cancer 8
D7Nds4 7 144844414 to 144844577 163 DNA segment DNA segment, Chr 7, Nuffield Department of Surgery 4
Tssr76003 7 144857291 to 144857303 12 - TSS region transcription start site region 76003
Tssr70357 7 144857414 to 144857433 19 + TSS region transcription start site region 70357
Cpgi20003 7 144860924 to 144862399 1475 CpG island CpG island 20003
Tssr70358 7 144861378 to 144861395 17 + TSS region transcription start site region 70358
Fgf4 7 144861386 to 144865243 3857 + protein coding gene fibroblast growth factor 4
Cpgi20004 7 144862641 to 144862966 325 CpG island CpG island 20004
Gm26793 7 144894121 to 144895807 1686 - antisense lncRNA gene predicted gene, 26793
Cpgi20005 7 144895632 to 144897422 1790 CpG island CpG island 20005
Tssr70359 7 144896464 to 144896471 7 + TSS region transcription start site region 70359
Tssr70360 7 144896523 to 144896539 16 + TSS region transcription start site region 70360
Fgf15 7 144896532 to 144900953 4421 + protein coding gene fibroblast growth factor 15
Tssr76004 7 144896899 to 144896939 40 - TSS region transcription start site region 76004
Tssr70361 7 144897017 to 144897037 20 + TSS region transcription start site region 70361
Tssr70362 7 144897047 to 144897056 9 + TSS region transcription start site region 70362
Tssr70363 7 144897061 to 144897071 10 + TSS region transcription start site region 70363
Tssr70364 7 144897116 to 144897135 19 + TSS region transcription start site region 70364
Tssr70365 7 144900431 to 144900474 43 + TSS region transcription start site region 70365