Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:144443639-144663650

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cttn 7 144435733 to 144471009 35276 - protein coding gene cortactin
Tssr75988 7 144449767 to 144449785 18 - TSS region transcription start site region 75988
Gm14376 7 144469533 to 144469993 460 - sense intronic lncRNA gene predicted gene 14376
Cpgi19996 7 144470070 to 144471029 959 CpG island CpG island 19996
Tssr75989 7 144470714 to 144470770 56 - TSS region transcription start site region 75989
Ppfia1 7 144476758 to 144553729 76971 - protein coding gene protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
Tssr75990 7 144520671 to 144520688 17 - TSS region transcription start site region 75990
Gm35626 7 144552798 to 144554487 1689 + pseudogene predicted gene, 35626
Cpgi19997 7 144553198 to 144554290 1092 CpG island CpG island 19997
Tssr75991 7 144553639 to 144553650 11 - TSS region transcription start site region 75991
Tssr75992 7 144553657 to 144553757 100 - TSS region transcription start site region 75992
Tssr70347 7 144553940 to 144553949 9 + TSS region transcription start site region 70347
Faddos 7 144567355 to 144581512 14157 + antisense lncRNA gene Fas (TNFRSF6)-associated via death domain, opposite strand
Tssr75993 7 144569900 to 144569903 3 - TSS region transcription start site region 75993
Fadd 7 144578323 to 144582436 4113 - protein coding gene Fas (TNFRSF6)-associated via death domain
Cpgi19998 7 144581640 to 144582734 1094 CpG island CpG island 19998
Tssr70348 7 144582119 to 144582174 55 + TSS region transcription start site region 70348
Tssr75994 7 144582392 to 144582454 62 - TSS region transcription start site region 75994
Tssr75995 7 144582457 to 144582474 17 - TSS region transcription start site region 75995
Ano1 7 144588549 to 144751974 163425 - protein coding gene anoctamin 1, calcium activated chloride channel
D7Mit293 7 144602987 to 144603107 120 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 293
D7Mit223 7 144609872 to 144609977 105 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 223