MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 7:144384767-144514785

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Shank2	7	144001928 to 144424494	422566	+	protein coding gene	SH3 and multiple ankyrin repeat domains 2
Gm14372	7	144368048 to 144406933	38885	-	antisense lncRNA gene	predicted gene 14372
Tssr2475	7	144406904 to 144406911	7	-	TSS region	transcription start site region 2475
Tssr75987	7	144406929 to 144406948	19	-	TSS region	transcription start site region 75987
Tssr70342	7	144407110 to 144407131	21	+	TSS region	transcription start site region 70342
Gm34621	7	144415144 to 144419277	4133	-	lncRNA gene	predicted gene, 34621
Tssr70343	7	144417810 to 144417826	16	+	TSS region	transcription start site region 70343
Tssr70344	7	144422939 to 144422959	20	+	TSS region	transcription start site region 70344
Tssr70345	7	144422972 to 144422995	23	+	TSS region	transcription start site region 70345
Tssr70346	7	144424117 to 144424121	4	+	TSS region	transcription start site region 70346
Gm34561	7	144426132 to 144431330	5198	-	lncRNA gene	predicted gene, 34561
Cttn	7	144435733 to 144471009	35276	-	protein coding gene	cortactin
Tssr75988	7	144449767 to 144449785	18	-	TSS region	transcription start site region 75988
Gm14376	7	144469533 to 144469993	460	-	sense intronic lncRNA gene	predicted gene 14376
Cpgi19996	7	144470070 to 144471029	959		CpG island	CpG island 19996
Tssr75989	7	144470714 to 144470770	56	-	TSS region	transcription start site region 75989
Ppfia1	7	144476758 to 144553729	76971	-	protein coding gene	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1