Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:143794254-144224338

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nadsyn1 7 143795584 to 143822849 27265 - protein coding gene NAD synthetase 1
Cpgi19991 7 143822548 to 143823233 685 CpG island CpG island 19991
Tssr75986 7 143822793 to 143822857 64 - TSS region transcription start site region 75986
Tssr70307 7 143823115 to 143823128 13 + TSS region transcription start site region 70307
Tssr70308 7 143823135 to 143823151 16 + TSS region transcription start site region 70308
Dhcr7 7 143823167 to 143848410 25243 + protein coding gene 7-dehydrocholesterol reductase
Tssr70309 7 143823396 to 143823399 3 + TSS region transcription start site region 70309
Tssr70310 7 143829647 to 143829683 36 + TSS region transcription start site region 70310
Cpgi19992 7 143829869 to 143830453 584 CpG island CpG island 19992
Tssr70311 7 143830178 to 143830189 11 + TSS region transcription start site region 70311
Tssr70312 7 143830204 to 143830249 45 + TSS region transcription start site region 70312
Tssr70313 7 143836623 to 143836631 8 + TSS region transcription start site region 70313
Tssr70314 7 143841220 to 143841235 15 + TSS region transcription start site region 70314
Tssr70315 7 143841239 to 143841254 15 + TSS region transcription start site region 70315
Tssr70316 7 143847350 to 143847379 29 + TSS region transcription start site region 70316
Tssr70317 7 143847877 to 143847904 27 + TSS region transcription start site region 70317
Acte1 7 143866838 to 143900046 33208 + protein coding gene actin, epsilon 1
Tssr2472 7 143866885 to 143866893 8 + TSS region transcription start site region 2472
Mir6404 7 143933115 to 143933208 93 + miRNA gene microRNA 6404
Gm34445 7 143949273 to 143956363 7090 - lncRNA gene predicted gene, 34445
Cpgi19993 7 143977655 to 143979602 1947 CpG island CpG island 19993
Tssr70318 7 143977655 to 143977684 29 + TSS region transcription start site region 70318
Tssr70319 7 143978097 to 143978140 43 + TSS region transcription start site region 70319
Tssr70320 7 143978317 to 143978331 14 + TSS region transcription start site region 70320
Tssr70321 7 143978428 to 143978444 16 + TSS region transcription start site region 70321
Tssr70322 7 143978928 to 143978965 37 + TSS region transcription start site region 70322
Tssr70323 7 143979415 to 143979432 17 + TSS region transcription start site region 70323
Shank2 7 144001928 to 144424494 422566 + protein coding gene SH3 and multiple ankyrin repeat domains 2
Mir3105 7 144009254 to 144009338 84 + miRNA gene microRNA 3105
Gm46006 7 144019070 to 144026560 7490 - lncRNA gene predicted gene, 46006
D7Mit177 7 144061043 to 144061182 139 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 177
Gm44999 7 144109593 to 144111085 1492 - unclassified gene predicted gene 44999
Tssr70324 7 144130464 to 144130467 3 + TSS region transcription start site region 70324
Tssr70325 7 144132895 to 144132904 9 + TSS region transcription start site region 70325
Tssr70326 7 144175255 to 144175272 17 + TSS region transcription start site region 70326
Cpgi19994 7 144175448 to 144176093 645 CpG island CpG island 19994
Tssr70327 7 144175452 to 144175486 34 + TSS region transcription start site region 70327
Tssr70328 7 144175491 to 144175506 15 + TSS region transcription start site region 70328
Tssr70329 7 144175513 to 144175527 14 + TSS region transcription start site region 70329
Tssr70330 7 144175628 to 144175646 18 + TSS region transcription start site region 70330
Tssr70331 7 144175680 to 144175702 22 + TSS region transcription start site region 70331
Tssr70332 7 144175709 to 144175720 11 + TSS region transcription start site region 70332
D7Mit15 7 144214685 to 144214825 140 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 15