Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:143480255-144870272

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196 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adbg1 7 119094158 to 144844577 25750419 QTL adult body growth 1
Slc22a18 7 143473736 to 143499334 25598 + protein coding gene solute carrier family 22 (organic cation transporter), member 18
Cpgi19983 7 143501497 to 143503245 1748 CpG island CpG island 19983
Phlda2 7 143501545 to 143503145 1600 - protein coding gene pleckstrin homology like domain, family A, member 2
Tssr75948 7 143502120 to 143502148 28 - TSS region transcription start site region 75948
Tssr75949 7 143502515 to 143502532 17 - TSS region transcription start site region 75949
Tssr75950 7 143502754 to 143502793 39 - TSS region transcription start site region 75950
Nap1l4 7 143513579 to 143549106 35527 - protein coding gene nucleosome assembly protein 1-like 4
Tssr75951 7 143521577 to 143521614 37 - TSS region transcription start site region 75951
Gm23297 7 143531394 to 143531520 126 - snoRNA gene predicted gene, 23297
Tssr75952 7 143548028 to 143548032 4 - TSS region transcription start site region 75952
Cpgi19984 7 143548324 to 143549651 1327 CpG island CpG island 19984
Tssr2471 7 143548367 to 143548404 37 + TSS region transcription start site region 2471
Tssr75953 7 143548792 to 143548839 47 - TSS region transcription start site region 75953
Tssr75954 7 143549055 to 143549125 70 - TSS region transcription start site region 75954
Tssr75955 7 143549244 to 143549255 11 - TSS region transcription start site region 75955
Cars 7 143557230 to 143600090 42860 - protein coding gene cysteinyl-tRNA synthetase
Tssr75956 7 143569172 to 143569204 32 - TSS region transcription start site region 75956
Mir7064 7 143570671 to 143570759 88 - miRNA gene microRNA 7064
Tssr75957 7 143592465 to 143592474 9 - TSS region transcription start site region 75957
Tssr75958 7 143592490 to 143592511 21 - TSS region transcription start site region 75958
Gm15580 7 143596439 to 143596994 555 + pseudogene predicted gene 15580
Cpgi19985 7 143599825 to 143600313 488 CpG island CpG island 19985
Tssr75959 7 143600049 to 143600078 29 - TSS region transcription start site region 75959
Gm15579 7 143600091 to 143600858 767 + antisense lncRNA gene predicted gene 15579
Tnfrsf26 7 143607685 to 143627845 20160 - protein coding gene tumor necrosis factor receptor superfamily, member 26
Tssr75960 7 143608205 to 143608231 26 - TSS region transcription start site region 75960
Tssr75961 7 143608449 to 143608461 12 - TSS region transcription start site region 75961
Tssr70301 7 143626375 to 143626388 13 + TSS region transcription start site region 70301
Tssr75962 7 143627841 to 143627846 5 - TSS region transcription start site region 75962
Tssr75963 7 143627908 to 143627963 55 - TSS region transcription start site region 75963
E230032D23Rik 7 143628024 to 143670614 42590 + antisense lncRNA gene RIKEN cDNA E230032D23 gene
Tssr70302 7 143628048 to 143628063 15 + TSS region transcription start site region 70302
Tssr70303 7 143628069 to 143628121 52 + TSS region transcription start site region 70303
Tssr75964 7 143628111 to 143628176 65 - TSS region transcription start site region 75964
Tssr70304 7 143628220 to 143628230 10 + TSS region transcription start site region 70304
Tssr70305 7 143628239 to 143628286 47 + TSS region transcription start site region 70305
Tssr75965 7 143628343 to 143628361 18 - TSS region transcription start site region 75965
Tssr75966 7 143628366 to 143628377 11 - TSS region transcription start site region 75966
Tssr75967 7 143628397 to 143628411 14 - TSS region transcription start site region 75967
Tnfrsf22 7 143634806 to 143649661 14855 - protein coding gene tumor necrosis factor receptor superfamily, member 22
Cpgi19986 7 143649197 to 143649711 514 CpG island CpG island 19986
Tssr75968 7 143649596 to 143649605 9 - TSS region transcription start site region 75968
Tssr75969 7 143649614 to 143649671 57 - TSS region transcription start site region 75969
Tnfrsf23 7 143665809 to 143685872 20063 - protein coding gene tumor necrosis factor receptor superfamily, member 23
Cpgi19987 7 143685447 to 143685938 491 CpG island CpG island 19987
Tssr75970 7 143685863 to 143685880 17 - TSS region transcription start site region 75970
Osbpl5 7 143688762 to 143756980 68218 - protein coding gene oxysterol binding protein-like 5
Tssr75971 7 143713586 to 143713613 27 - TSS region transcription start site region 75971
Tssr75972 7 143735863 to 143735866 3 - TSS region transcription start site region 75972
Cpgi19988 7 143739998 to 143740637 639 CpG island CpG island 19988
Tssr75973 7 143740316 to 143740368 52 - TSS region transcription start site region 75973
Cpgi19989 7 143756943 to 143757270 327 CpG island CpG island 19989
Tssr75974 7 143756994 to 143757034 40 - TSS region transcription start site region 75974
Tssr70306 7 143757102 to 143757117 15 + TSS region transcription start site region 70306
Mrgprg 7 143763710 to 143766993 3283 - protein coding gene MAS-related GPR, member G
Tssr75975 7 143766916 to 143766928 12 - TSS region transcription start site region 75975
Tssr75976 7 143766956 to 143766962 6 - TSS region transcription start site region 75976
Tssr75977 7 143766985 to 143766996 11 - TSS region transcription start site region 75977
Tssr75978 7 143767006 to 143767012 6 - TSS region transcription start site region 75978
Gm44998 7 143773346 to 143775113 1767 - unclassified gene predicted gene 44998
Tssr75979 7 143775529 to 143775531 2 - TSS region transcription start site region 75979
Mrgpre 7 143778363 to 143784500 6137 - protein coding gene MAS-related GPR, member E
Gm22064 7 143780090 to 143780155 65 + miRNA gene predicted gene, 22064
Tssr75980 7 143780222 to 143780233 11 - TSS region transcription start site region 75980
Tssr75981 7 143780235 to 143780257 22 - TSS region transcription start site region 75981
Tssr75982 7 143780291 to 143780302 11 - TSS region transcription start site region 75982
Tssr75983 7 143780423 to 143780430 7 - TSS region transcription start site region 75983
Tssr75984 7 143780512 to 143780515 3 - TSS region transcription start site region 75984
Cpgi19990 7 143784030 to 143784348 318 CpG island CpG island 19990
Tssr75985 7 143784275 to 143784326 51 - TSS region transcription start site region 75985
D7Mit140 7 143791380 to 143791512 132 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 140
Nadsyn1 7 143795584 to 143822849 27265 - protein coding gene NAD synthetase 1
Cpgi19991 7 143822548 to 143823233 685 CpG island CpG island 19991
Tssr75986 7 143822793 to 143822857 64 - TSS region transcription start site region 75986
Tssr70307 7 143823115 to 143823128 13 + TSS region transcription start site region 70307
Tssr70308 7 143823135 to 143823151 16 + TSS region transcription start site region 70308
Dhcr7 7 143823167 to 143848410 25243 + protein coding gene 7-dehydrocholesterol reductase
Tssr70309 7 143823396 to 143823399 3 + TSS region transcription start site region 70309
Tssr70310 7 143829647 to 143829683 36 + TSS region transcription start site region 70310
Cpgi19992 7 143829869 to 143830453 584 CpG island CpG island 19992
Tssr70311 7 143830178 to 143830189 11 + TSS region transcription start site region 70311
Tssr70312 7 143830204 to 143830249 45 + TSS region transcription start site region 70312
Tssr70313 7 143836623 to 143836631 8 + TSS region transcription start site region 70313
Tssr70314 7 143841220 to 143841235 15 + TSS region transcription start site region 70314
Tssr70315 7 143841239 to 143841254 15 + TSS region transcription start site region 70315
Tssr70316 7 143847350 to 143847379 29 + TSS region transcription start site region 70316
Tssr70317 7 143847877 to 143847904 27 + TSS region transcription start site region 70317
Acte1 7 143866838 to 143900046 33208 + protein coding gene actin, epsilon 1
Tssr2472 7 143866885 to 143866893 8 + TSS region transcription start site region 2472
Mir6404 7 143933115 to 143933208 93 + miRNA gene microRNA 6404
Gm34445 7 143949273 to 143956363 7090 - lncRNA gene predicted gene, 34445
Cpgi19993 7 143977655 to 143979602 1947 CpG island CpG island 19993
Tssr70318 7 143977655 to 143977684 29 + TSS region transcription start site region 70318
Tssr70319 7 143978097 to 143978140 43 + TSS region transcription start site region 70319
Tssr70320 7 143978317 to 143978331 14 + TSS region transcription start site region 70320
Tssr70321 7 143978428 to 143978444 16 + TSS region transcription start site region 70321
Tssr70322 7 143978928 to 143978965 37 + TSS region transcription start site region 70322
Tssr70323 7 143979415 to 143979432 17 + TSS region transcription start site region 70323
Shank2 7 144001928 to 144424494 422566 + protein coding gene SH3 and multiple ankyrin repeat domains 2
Mir3105 7 144009254 to 144009338 84 + miRNA gene microRNA 3105
Gm46006 7 144019070 to 144026560 7490 - lncRNA gene predicted gene, 46006
D7Mit177 7 144061043 to 144061182 139 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 177
Gm44999 7 144109593 to 144111085 1492 - unclassified gene predicted gene 44999
Tssr70324 7 144130464 to 144130467 3 + TSS region transcription start site region 70324
Tssr70325 7 144132895 to 144132904 9 + TSS region transcription start site region 70325
Tssr70326 7 144175255 to 144175272 17 + TSS region transcription start site region 70326
Cpgi19994 7 144175448 to 144176093 645 CpG island CpG island 19994
Tssr70327 7 144175452 to 144175486 34 + TSS region transcription start site region 70327
Tssr70328 7 144175491 to 144175506 15 + TSS region transcription start site region 70328
Tssr70329 7 144175513 to 144175527 14 + TSS region transcription start site region 70329
Tssr70330 7 144175628 to 144175646 18 + TSS region transcription start site region 70330
Tssr70331 7 144175680 to 144175702 22 + TSS region transcription start site region 70331
Tssr70332 7 144175709 to 144175720 11 + TSS region transcription start site region 70332
D7Mit15 7 144214685 to 144214825 140 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 15
Tssr70333 7 144238690 to 144238705 15 + TSS region transcription start site region 70333
Tssr70334 7 144238718 to 144238730 12 + TSS region transcription start site region 70334
Tssr2473 7 144240930 to 144240936 6 + TSS region transcription start site region 2473
Tssr70335 7 144264078 to 144264091 13 + TSS region transcription start site region 70335
Tssr70336 7 144264105 to 144264112 7 + TSS region transcription start site region 70336
Cpgi19995 7 144284161 to 144285094 933 CpG island CpG island 19995
Tssr70337 7 144284388 to 144284399 11 + TSS region transcription start site region 70337
Tssr2474 7 144284412 to 144284424 12 + TSS region transcription start site region 2474
Tssr70338 7 144284464 to 144284506 42 + TSS region transcription start site region 70338
Tssr70339 7 144321061 to 144321089 28 + TSS region transcription start site region 70339
Tssr70340 7 144321119 to 144321173 54 + TSS region transcription start site region 70340
Tssr70341 7 144321383 to 144321437 54 + TSS region transcription start site region 70341
D7Mit47 7 144338215 to 144338424 209 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 47
Gm14372 7 144368048 to 144406933 38885 - antisense lncRNA gene predicted gene 14372
Tssr2475 7 144406904 to 144406911 7 - TSS region transcription start site region 2475
Tssr75987 7 144406929 to 144406948 19 - TSS region transcription start site region 75987
Tssr70342 7 144407110 to 144407131 21 + TSS region transcription start site region 70342
Gm34621 7 144415144 to 144419277 4133 - lncRNA gene predicted gene, 34621
Tssr70343 7 144417810 to 144417826 16 + TSS region transcription start site region 70343
Tssr70344 7 144422939 to 144422959 20 + TSS region transcription start site region 70344
Tssr70345 7 144422972 to 144422995 23 + TSS region transcription start site region 70345
Tssr70346 7 144424117 to 144424121 4 + TSS region transcription start site region 70346
Gm34561 7 144426132 to 144431330 5198 - lncRNA gene predicted gene, 34561
Cttn 7 144435733 to 144471009 35276 - protein coding gene cortactin
Tssr75988 7 144449767 to 144449785 18 - TSS region transcription start site region 75988
Gm14376 7 144469533 to 144469993 460 - sense intronic lncRNA gene predicted gene 14376
Cpgi19996 7 144470070 to 144471029 959 CpG island CpG island 19996
Tssr75989 7 144470714 to 144470770 56 - TSS region transcription start site region 75989
Ppfia1 7 144476758 to 144553729 76971 - protein coding gene protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
Tssr75990 7 144520671 to 144520688 17 - TSS region transcription start site region 75990
Gm35626 7 144552798 to 144554487 1689 + pseudogene predicted gene, 35626
Cpgi19997 7 144553198 to 144554290 1092 CpG island CpG island 19997
Tssr75991 7 144553639 to 144553650 11 - TSS region transcription start site region 75991
Tssr75992 7 144553657 to 144553757 100 - TSS region transcription start site region 75992
Tssr70347 7 144553940 to 144553949 9 + TSS region transcription start site region 70347
Faddos 7 144567355 to 144581512 14157 + antisense lncRNA gene Fas (TNFRSF6)-associated via death domain, opposite strand
Tssr75993 7 144569900 to 144569903 3 - TSS region transcription start site region 75993
Fadd 7 144578323 to 144582436 4113 - protein coding gene Fas (TNFRSF6)-associated via death domain
Cpgi19998 7 144581640 to 144582734 1094 CpG island CpG island 19998
Tssr70348 7 144582119 to 144582174 55 + TSS region transcription start site region 70348
Tssr75994 7 144582392 to 144582454 62 - TSS region transcription start site region 75994
Tssr75995 7 144582457 to 144582474 17 - TSS region transcription start site region 75995
Ano1 7 144588549 to 144751974 163425 - protein coding gene anoctamin 1, calcium activated chloride channel
D7Mit293 7 144602987 to 144603107 120 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 293
D7Mit223 7 144609872 to 144609977 105 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 223
Cpgi19999 7 144677902 to 144678074 172 CpG island CpG island 19999
Cpgi20000 7 144678280 to 144678988 708 CpG island CpG island 20000
Tssr75996 7 144678775 to 144678839 64 - TSS region transcription start site region 75996
Tssr75997 7 144678851 to 144678908 57 - TSS region transcription start site region 75997
Cpgi20001 7 144738191 to 144738760 569 CpG island CpG island 20001
Tssr75998 7 144738492 to 144738508 16 - TSS region transcription start site region 75998
Tssr75999 7 144738520 to 144738597 77 - TSS region transcription start site region 75999
D930030F02Rik 7 144741614 to 144770512 28898 + lncRNA gene RIKEN cDNA D930030F02 gene
Tssr70349 7 144742057 to 144742069 12 + TSS region transcription start site region 70349
Tssr70350 7 144742075 to 144742083 8 + TSS region transcription start site region 70350
Tssr70351 7 144742087 to 144742099 12 + TSS region transcription start site region 70351
Tssr70352 7 144742109 to 144742116 7 + TSS region transcription start site region 70352
Gm44930 7 144742113 to 144750008 7895 + antisense lncRNA gene predicted gene 44930
Tssr76000 7 144751968 to 144752007 39 - TSS region transcription start site region 76000
Tssr76001 7 144752024 to 144752027 3 - TSS region transcription start site region 76001
D7Mit259 7 144757504 to 144757647 143 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 259
Pbwg3 7 144757504 to 144757647 143 QTL postnatal body weight growth 3
Gm10152 7 144763139 to 144764482 1343 + unclassified gene predicted gene 10152
Gm44929 7 144764763 to 144770571 5808 + lincRNA gene predicted gene 44929
Tssr76002 7 144778932 to 144778936 4 - TSS region transcription start site region 76002
Gm34964 7 144787041 to 144791808 4767 - lincRNA gene predicted gene, 34964
Gm9711 7 144791996 to 144792322 326 + pseudogene predicted gene 9711
Tssr70353 7 144837479 to 144837509 30 + TSS region transcription start site region 70353
Cpgi20002 7 144837857 to 144840009 2152 CpG island CpG island 20002
Tssr70354 7 144837861 to 144837877 16 + TSS region transcription start site region 70354
Tssr70355 7 144838053 to 144838079 26 + TSS region transcription start site region 70355
Fgf3 7 144838083 to 144844436 6353 + protein coding gene fibroblast growth factor 3
Tssr70356 7 144838590 to 144838614 24 + TSS region transcription start site region 70356
D7Nds4 7 144844414 to 144844577 163 DNA segment DNA segment, Chr 7, Nuffield Department of Surgery 4
Sluc8 7 144844414 to 144844577 163 QTL susceptibility to lung cancer 8
Tssr76003 7 144857291 to 144857303 12 - TSS region transcription start site region 76003
Tssr70357 7 144857414 to 144857433 19 + TSS region transcription start site region 70357
Cpgi20003 7 144860924 to 144862399 1475 CpG island CpG island 20003
Tssr70358 7 144861378 to 144861395 17 + TSS region transcription start site region 70358
Fgf4 7 144861386 to 144865243 3857 + protein coding gene fibroblast growth factor 4
Cpgi20004 7 144862641 to 144862966 325 CpG island CpG island 20004