Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:143449647-144209683

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144 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdkn1c 7 143458339 to 143461050 2711 - protein coding gene cyclin-dependent kinase inhibitor 1C (P57)
Tssr75936 7 143458490 to 143458517 27 - TSS region transcription start site region 75936
Tssr75937 7 143458579 to 143458620 41 - TSS region transcription start site region 75937
Tssr70288 7 143458699 to 143458728 29 + TSS region transcription start site region 70288
Tssr75938 7 143458772 to 143458794 22 - TSS region transcription start site region 75938
Tssr75939 7 143458804 to 143458821 17 - TSS region transcription start site region 75939
Tssr75940 7 143458823 to 143458856 33 - TSS region transcription start site region 75940
Cpgi19981 7 143458849 to 143461672 2823 CpG island CpG island 19981
Tssr75941 7 143458936 to 143458959 23 - TSS region transcription start site region 75941
Tssr75942 7 143459334 to 143459344 10 - TSS region transcription start site region 75942
Tssr75943 7 143459381 to 143459420 39 - TSS region transcription start site region 75943
Gm44732 7 143459749 to 143460640 891 + antisense lncRNA gene predicted gene 44732
Tssr70289 7 143459852 to 143459898 46 + TSS region transcription start site region 70289
Tssr75944 7 143460236 to 143460266 30 - TSS region transcription start site region 75944
Tssr75945 7 143460707 to 143460753 46 - TSS region transcription start site region 75945
Tssr75946 7 143460989 to 143461005 16 - TSS region transcription start site region 75946
AF313042 7 143462528 to 143462844 316 unclassified gene cDNA sequence AF313042
Gm33663 7 143463335 to 143466781 3446 - lncRNA gene predicted gene, 33663
Tssr75947 7 143464220 to 143464230 10 - TSS region transcription start site region 75947
Cpgi19982 7 143464755 to 143465513 758 CpG island CpG island 19982
Tssr70290 7 143466084 to 143466106 22 + TSS region transcription start site region 70290
Slc22a18 7 143473736 to 143499334 25598 + protein coding gene solute carrier family 22 (organic cation transporter), member 18
Tssr70291 7 143473750 to 143473808 58 + TSS region transcription start site region 70291
Tssr70292 7 143475094 to 143475115 21 + TSS region transcription start site region 70292
Tssr70293 7 143475120 to 143475162 42 + TSS region transcription start site region 70293
Tssr70294 7 143475166 to 143475192 26 + TSS region transcription start site region 70294
Tssr70295 7 143475201 to 143475207 6 + TSS region transcription start site region 70295
Tssr70296 7 143476110 to 143476122 12 + TSS region transcription start site region 70296
Tssr70297 7 143476132 to 143476160 28 + TSS region transcription start site region 70297
Tssr70298 7 143476163 to 143476192 29 + TSS region transcription start site region 70298
Tssr70299 7 143476232 to 143476245 13 + TSS region transcription start site region 70299
Tssr70300 7 143479709 to 143479757 48 + TSS region transcription start site region 70300
Cpgi19983 7 143501497 to 143503245 1748 CpG island CpG island 19983
Phlda2 7 143501545 to 143503145 1600 - protein coding gene pleckstrin homology like domain, family A, member 2
Tssr75948 7 143502120 to 143502148 28 - TSS region transcription start site region 75948
Tssr75949 7 143502515 to 143502532 17 - TSS region transcription start site region 75949
Tssr75950 7 143502754 to 143502793 39 - TSS region transcription start site region 75950
Nap1l4 7 143513579 to 143549106 35527 - protein coding gene nucleosome assembly protein 1-like 4
Tssr75951 7 143521577 to 143521614 37 - TSS region transcription start site region 75951
Gm23297 7 143531394 to 143531520 126 - snoRNA gene predicted gene, 23297
Tssr75952 7 143548028 to 143548032 4 - TSS region transcription start site region 75952
Cpgi19984 7 143548324 to 143549651 1327 CpG island CpG island 19984
Tssr2471 7 143548367 to 143548404 37 + TSS region transcription start site region 2471
Tssr75953 7 143548792 to 143548839 47 - TSS region transcription start site region 75953
Tssr75954 7 143549055 to 143549125 70 - TSS region transcription start site region 75954
Tssr75955 7 143549244 to 143549255 11 - TSS region transcription start site region 75955
Cars 7 143557230 to 143600090 42860 - protein coding gene cysteinyl-tRNA synthetase
Tssr75956 7 143569172 to 143569204 32 - TSS region transcription start site region 75956
Mir7064 7 143570671 to 143570759 88 - miRNA gene microRNA 7064
Tssr75957 7 143592465 to 143592474 9 - TSS region transcription start site region 75957
Tssr75958 7 143592490 to 143592511 21 - TSS region transcription start site region 75958
Gm15580 7 143596439 to 143596994 555 + pseudogene predicted gene 15580
Cpgi19985 7 143599825 to 143600313 488 CpG island CpG island 19985
Tssr75959 7 143600049 to 143600078 29 - TSS region transcription start site region 75959
Gm15579 7 143600091 to 143600858 767 + antisense lncRNA gene predicted gene 15579
Tnfrsf26 7 143607685 to 143627845 20160 - protein coding gene tumor necrosis factor receptor superfamily, member 26
Tssr75960 7 143608205 to 143608231 26 - TSS region transcription start site region 75960
Tssr75961 7 143608449 to 143608461 12 - TSS region transcription start site region 75961
Tssr70301 7 143626375 to 143626388 13 + TSS region transcription start site region 70301
Tssr75962 7 143627841 to 143627846 5 - TSS region transcription start site region 75962
Tssr75963 7 143627908 to 143627963 55 - TSS region transcription start site region 75963
E230032D23Rik 7 143628024 to 143670614 42590 + antisense lncRNA gene RIKEN cDNA E230032D23 gene
Tssr70302 7 143628048 to 143628063 15 + TSS region transcription start site region 70302
Tssr70303 7 143628069 to 143628121 52 + TSS region transcription start site region 70303
Tssr75964 7 143628111 to 143628176 65 - TSS region transcription start site region 75964
Tssr70304 7 143628220 to 143628230 10 + TSS region transcription start site region 70304
Tssr70305 7 143628239 to 143628286 47 + TSS region transcription start site region 70305
Tssr75965 7 143628343 to 143628361 18 - TSS region transcription start site region 75965
Tssr75966 7 143628366 to 143628377 11 - TSS region transcription start site region 75966
Tssr75967 7 143628397 to 143628411 14 - TSS region transcription start site region 75967
Tnfrsf22 7 143634806 to 143649661 14855 - protein coding gene tumor necrosis factor receptor superfamily, member 22
Cpgi19986 7 143649197 to 143649711 514 CpG island CpG island 19986
Tssr75968 7 143649596 to 143649605 9 - TSS region transcription start site region 75968
Tssr75969 7 143649614 to 143649671 57 - TSS region transcription start site region 75969
Tnfrsf23 7 143665809 to 143685872 20063 - protein coding gene tumor necrosis factor receptor superfamily, member 23
Cpgi19987 7 143685447 to 143685938 491 CpG island CpG island 19987
Tssr75970 7 143685863 to 143685880 17 - TSS region transcription start site region 75970
Osbpl5 7 143688762 to 143756980 68218 - protein coding gene oxysterol binding protein-like 5
Tssr75971 7 143713586 to 143713613 27 - TSS region transcription start site region 75971
Tssr75972 7 143735863 to 143735866 3 - TSS region transcription start site region 75972
Cpgi19988 7 143739998 to 143740637 639 CpG island CpG island 19988
Tssr75973 7 143740316 to 143740368 52 - TSS region transcription start site region 75973
Cpgi19989 7 143756943 to 143757270 327 CpG island CpG island 19989
Tssr75974 7 143756994 to 143757034 40 - TSS region transcription start site region 75974
Tssr70306 7 143757102 to 143757117 15 + TSS region transcription start site region 70306
Mrgprg 7 143763710 to 143766993 3283 - protein coding gene MAS-related GPR, member G
Tssr75975 7 143766916 to 143766928 12 - TSS region transcription start site region 75975
Tssr75976 7 143766956 to 143766962 6 - TSS region transcription start site region 75976
Tssr75977 7 143766985 to 143766996 11 - TSS region transcription start site region 75977
Tssr75978 7 143767006 to 143767012 6 - TSS region transcription start site region 75978
Gm44998 7 143773346 to 143775113 1767 - unclassified gene predicted gene 44998
Tssr75979 7 143775529 to 143775531 2 - TSS region transcription start site region 75979
Mrgpre 7 143778363 to 143784500 6137 - protein coding gene MAS-related GPR, member E
Gm22064 7 143780090 to 143780155 65 + miRNA gene predicted gene, 22064
Tssr75980 7 143780222 to 143780233 11 - TSS region transcription start site region 75980
Tssr75981 7 143780235 to 143780257 22 - TSS region transcription start site region 75981
Tssr75982 7 143780291 to 143780302 11 - TSS region transcription start site region 75982
Tssr75983 7 143780423 to 143780430 7 - TSS region transcription start site region 75983
Tssr75984 7 143780512 to 143780515 3 - TSS region transcription start site region 75984
Cpgi19990 7 143784030 to 143784348 318 CpG island CpG island 19990
Tssr75985 7 143784275 to 143784326 51 - TSS region transcription start site region 75985
D7Mit140 7 143791380 to 143791512 132 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 140
Nadsyn1 7 143795584 to 143822849 27265 - protein coding gene NAD synthetase 1
Cpgi19991 7 143822548 to 143823233 685 CpG island CpG island 19991
Tssr75986 7 143822793 to 143822857 64 - TSS region transcription start site region 75986
Tssr70307 7 143823115 to 143823128 13 + TSS region transcription start site region 70307
Tssr70308 7 143823135 to 143823151 16 + TSS region transcription start site region 70308
Dhcr7 7 143823167 to 143848410 25243 + protein coding gene 7-dehydrocholesterol reductase
Tssr70309 7 143823396 to 143823399 3 + TSS region transcription start site region 70309
Tssr70310 7 143829647 to 143829683 36 + TSS region transcription start site region 70310
Cpgi19992 7 143829869 to 143830453 584 CpG island CpG island 19992
Tssr70311 7 143830178 to 143830189 11 + TSS region transcription start site region 70311
Tssr70312 7 143830204 to 143830249 45 + TSS region transcription start site region 70312
Tssr70313 7 143836623 to 143836631 8 + TSS region transcription start site region 70313
Tssr70314 7 143841220 to 143841235 15 + TSS region transcription start site region 70314
Tssr70315 7 143841239 to 143841254 15 + TSS region transcription start site region 70315
Tssr70316 7 143847350 to 143847379 29 + TSS region transcription start site region 70316
Tssr70317 7 143847877 to 143847904 27 + TSS region transcription start site region 70317
Acte1 7 143866838 to 143900046 33208 + protein coding gene actin, epsilon 1
Tssr2472 7 143866885 to 143866893 8 + TSS region transcription start site region 2472
Mir6404 7 143933115 to 143933208 93 + miRNA gene microRNA 6404
Gm34445 7 143949273 to 143956363 7090 - lncRNA gene predicted gene, 34445
Cpgi19993 7 143977655 to 143979602 1947 CpG island CpG island 19993
Tssr70318 7 143977655 to 143977684 29 + TSS region transcription start site region 70318
Tssr70319 7 143978097 to 143978140 43 + TSS region transcription start site region 70319
Tssr70320 7 143978317 to 143978331 14 + TSS region transcription start site region 70320
Tssr70321 7 143978428 to 143978444 16 + TSS region transcription start site region 70321
Tssr70322 7 143978928 to 143978965 37 + TSS region transcription start site region 70322
Tssr70323 7 143979415 to 143979432 17 + TSS region transcription start site region 70323
Shank2 7 144001928 to 144424494 422566 + protein coding gene SH3 and multiple ankyrin repeat domains 2
Mir3105 7 144009254 to 144009338 84 + miRNA gene microRNA 3105
Gm46006 7 144019070 to 144026560 7490 - lncRNA gene predicted gene, 46006
D7Mit177 7 144061043 to 144061182 139 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 177
Gm44999 7 144109593 to 144111085 1492 - unclassified gene predicted gene 44999
Tssr70324 7 144130464 to 144130467 3 + TSS region transcription start site region 70324
Tssr70325 7 144132895 to 144132904 9 + TSS region transcription start site region 70325
Tssr70326 7 144175255 to 144175272 17 + TSS region transcription start site region 70326
Cpgi19994 7 144175448 to 144176093 645 CpG island CpG island 19994
Tssr70327 7 144175452 to 144175486 34 + TSS region transcription start site region 70327
Tssr70328 7 144175491 to 144175506 15 + TSS region transcription start site region 70328
Tssr70329 7 144175513 to 144175527 14 + TSS region transcription start site region 70329
Tssr70330 7 144175628 to 144175646 18 + TSS region transcription start site region 70330
Tssr70331 7 144175680 to 144175702 22 + TSS region transcription start site region 70331
Tssr70332 7 144175709 to 144175720 11 + TSS region transcription start site region 70332