Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:143087698-143511617

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trpm5 7 143071529 to 143094642 23113 - protein coding gene transient receptor potential cation channel, subfamily M, member 5
Tssr75921 7 143094005 to 143094041 36 - TSS region transcription start site region 75921
Tssr75922 7 143099876 to 143099877 1 - TSS region transcription start site region 75922
Tssr2469 7 143106358 to 143106364 6 + TSS region transcription start site region 2469
Cpgi19973 7 143106637 to 143107954 1317 CpG island CpG island 19973
Kcnq1 7 143106742 to 143427050 320308 + protein coding gene potassium voltage-gated channel, subfamily Q, member 1
Tssr70283 7 143107234 to 143107250 16 + TSS region transcription start site region 70283
Tssr70284 7 143107252 to 143107286 34 + TSS region transcription start site region 70284
Tssr70285 7 143107300 to 143107314 14 + TSS region transcription start site region 70285
Tssr70286 7 143109227 to 143109255 28 + TSS region transcription start site region 70286
Gm38321 7 143124569 to 143124803 234 + unclassified gene predicted gene, 38321
Gm37235 7 143127792 to 143127850 58 + unclassified gene predicted gene, 37235
Gm28821 7 143135031 to 143140608 5577 - antisense lncRNA gene predicted gene 28821
Cpgi19974 7 143153973 to 143154216 243 CpG island CpG island 19974
Cpgi19975 7 143154541 to 143154804 263 CpG island CpG island 19975
Tssr2470 7 143166045 to 143166047 2 + TSS region transcription start site region 2470
D7Mit175 7 143209639 to 143209745 106 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 175
Kcnq1ot1 7 143213111 to 143296547 83436 - antisense lncRNA gene KCNQ1 overlapping transcript 1
Tssr75923 7 143230270 to 143230282 12 - TSS region transcription start site region 75923
Tssr75924 7 143238090 to 143238103 13 - TSS region transcription start site region 75924
Tssr75925 7 143238196 to 143238209 13 - TSS region transcription start site region 75925
Tssr75926 7 143241422 to 143241441 19 - TSS region transcription start site region 75926
Tssr75927 7 143242452 to 143242474 22 - TSS region transcription start site region 75927
Tssr75928 7 143242568 to 143242583 15 - TSS region transcription start site region 75928
Tssr75929 7 143242712 to 143242720 8 - TSS region transcription start site region 75929
Tssr75930 7 143250465 to 143250472 7 - TSS region transcription start site region 75930
Gm27395 7 143251367 to 143251826 459 + unclassified non-coding RNA gene predicted gene, 27395
Gm27389 7 143273053 to 143273247 194 + unclassified non-coding RNA gene predicted gene, 27389
Gm27803 7 143273566 to 143273684 118 + unclassified non-coding RNA gene predicted gene, 27803
Tssr75931 7 143273770 to 143273775 5 - TSS region transcription start site region 75931
Gm27539 7 143293932 to 143294155 223 + unclassified non-coding RNA gene predicted gene, 27539
Cpgi19976 7 143295116 to 143296665 1549 CpG island CpG island 19976
Tssr75932 7 143296514 to 143296525 11 - TSS region transcription start site region 75932
Tssr75933 7 143296529 to 143296566 37 - TSS region transcription start site region 75933
Gm37364 7 143297698 to 143301617 3919 + unclassified gene predicted gene, 37364
Tssr75934 7 143299847 to 143299849 2 - TSS region transcription start site region 75934
Tssr70287 7 143306364 to 143306367 3 + TSS region transcription start site region 70287
4933417O13Rik 7 143322772 to 143330650 7878 - antisense lncRNA gene RIKEN cDNA 4933417O13 gene
Cpgi19977 7 143329572 to 143329787 215 CpG island CpG island 19977
Gm38095 7 143344437 to 143345838 1401 + unclassified gene predicted gene, 38095
Gm38065 7 143350421 to 143353912 3491 - unclassified gene predicted gene, 38065
Tssr75935 7 143423756 to 143423760 4 - TSS region transcription start site region 75935
Cpgi19978 7 143428502 to 143428740 238 CpG island CpG island 19978
Cpgi19979 7 143437493 to 143438766 1273 CpG island CpG island 19979
Cpgi19980 7 143445168 to 143446200 1032 CpG island CpG island 19980
Gm27901 7 143447605 to 143447665 60 + unclassified non-coding RNA gene predicted gene, 27901
Cdkn1c 7 143458339 to 143461050 2711 - protein coding gene cyclin-dependent kinase inhibitor 1C (P57)
Tssr75936 7 143458490 to 143458517 27 - TSS region transcription start site region 75936
Tssr75937 7 143458579 to 143458620 41 - TSS region transcription start site region 75937
Tssr70288 7 143458699 to 143458728 29 + TSS region transcription start site region 70288
Tssr75938 7 143458772 to 143458794 22 - TSS region transcription start site region 75938
Tssr75939 7 143458804 to 143458821 17 - TSS region transcription start site region 75939
Tssr75940 7 143458823 to 143458856 33 - TSS region transcription start site region 75940
Cpgi19981 7 143458849 to 143461672 2823 CpG island CpG island 19981
Tssr75941 7 143458936 to 143458959 23 - TSS region transcription start site region 75941
Tssr75942 7 143459334 to 143459344 10 - TSS region transcription start site region 75942
Tssr75943 7 143459381 to 143459420 39 - TSS region transcription start site region 75943
Gm44732 7 143459749 to 143460640 891 + antisense lncRNA gene predicted gene 44732
Tssr70289 7 143459852 to 143459898 46 + TSS region transcription start site region 70289
Tssr75944 7 143460236 to 143460266 30 - TSS region transcription start site region 75944
Tssr75945 7 143460707 to 143460753 46 - TSS region transcription start site region 75945
Tssr75946 7 143460989 to 143461005 16 - TSS region transcription start site region 75946
AF313042 7 143462528 to 143462844 316 unclassified gene cDNA sequence AF313042
Gm33663 7 143463335 to 143466781 3446 - lncRNA gene predicted gene, 33663
Tssr75947 7 143464220 to 143464230 10 - TSS region transcription start site region 75947
Cpgi19982 7 143464755 to 143465513 758 CpG island CpG island 19982
Tssr70290 7 143466084 to 143466106 22 + TSS region transcription start site region 70290
Slc22a18 7 143473736 to 143499334 25598 + protein coding gene solute carrier family 22 (organic cation transporter), member 18
Tssr70291 7 143473750 to 143473808 58 + TSS region transcription start site region 70291
Tssr70292 7 143475094 to 143475115 21 + TSS region transcription start site region 70292
Tssr70293 7 143475120 to 143475162 42 + TSS region transcription start site region 70293
Tssr70294 7 143475166 to 143475192 26 + TSS region transcription start site region 70294
Tssr70295 7 143475201 to 143475207 6 + TSS region transcription start site region 70295
Tssr70296 7 143476110 to 143476122 12 + TSS region transcription start site region 70296
Tssr70297 7 143476132 to 143476160 28 + TSS region transcription start site region 70297
Tssr70298 7 143476163 to 143476192 29 + TSS region transcription start site region 70298
Tssr70299 7 143476232 to 143476245 13 + TSS region transcription start site region 70299
Tssr70300 7 143479709 to 143479757 48 + TSS region transcription start site region 70300
Cpgi19983 7 143501497 to 143503245 1748 CpG island CpG island 19983
Phlda2 7 143501545 to 143503145 1600 - protein coding gene pleckstrin homology like domain, family A, member 2
Tssr75948 7 143502120 to 143502148 28 - TSS region transcription start site region 75948
Tssr75949 7 143502515 to 143502532 17 - TSS region transcription start site region 75949
Tssr75950 7 143502754 to 143502793 39 - TSS region transcription start site region 75950