Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:14268949-16320548

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271 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Phf20-ps 7 14304780 to 14307665 2885 + pseudogene PHD finger protein 20, pseudogene
Obox8 7 14331436 to 14333557 2121 - protein coding gene oocyte specific homeobox 8
Tssr70666 7 14333570 to 14333574 4 - TSS region transcription start site region 70666
Mrps36-ps3 7 14342026 to 14342330 304 - pseudogene mitochondrial ribosomal protein S36, pseudogene 3
Crs-ps 7 14366951 to 14370207 3256 - pseudogene cone rod homeobox, pseudogene
Sult2a8 7 14410686 to 14446769 36083 - protein coding gene sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 8
Tssr70667 7 14427851 to 14427900 49 - TSS region transcription start site region 70667
Tssr70668 7 14436440 to 14436457 17 - TSS region transcription start site region 70668
Tssr70669 7 14438538 to 14438558 20 - TSS region transcription start site region 70669
Tssr70670 7 14439638 to 14439677 39 - TSS region transcription start site region 70670
Tssr70671 7 14446509 to 14446516 7 - TSS region transcription start site region 70671
Tssr70672 7 14446570 to 14446587 17 - TSS region transcription start site region 70672
Tssr70673 7 14446651 to 14446672 21 - TSS region transcription start site region 70673
Sult2a7 7 14465159 to 14492926 27767 - protein coding gene sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 7
Tssr70674 7 14493017 to 14493041 24 - TSS region transcription start site region 70674
Obox4-ps1 7 14517971 to 14518670 699 - pseudogene oocyte specific homeobox 4, pseudogene 1
Tssr64556 7 14518556 to 14518567 11 + TSS region transcription start site region 64556
Obox4-ps2 7 14529625 to 14530066 441 - pseudogene oocyte specific homeobox 4, pseudogene 2
Nlrp5-ps 7 14530652 to 14622479 91827 - pseudogene NLR family, pyrin domain containing 5, pseudogene
Gm38596 7 14532918 to 14536041 3123 + lncRNA gene predicted gene, 38596
Obox4-ps3 7 14548714 to 14549233 519 + pseudogene oocyte specific homeobox 4, pseudogene 3
Vmn1r90 7 14561242 to 14562171 929 - protein coding gene vomeronasal 1 receptor 90
Zfp-ps 7 14566761 to 14567238 477 + pseudogene zinc finger protein, pseudogene
Ranbp2-ps1 7 14616384 to 14616786 402 + pseudogene RAN binding protein 2, pseudogene 1
Tssr70675 7 14616698 to 14616702 4 - TSS region transcription start site region 70675
Cpgi18340 7 14622194 to 14623547 1353 CpG island CpG island 18340
Obox3-ps7 7 14634039 to 14634573 534 + pseudogene oocyte specific homeobox 3, pseudogene 7
Obox7 7 14659708 to 14665996 6288 + protein coding gene oocyte specific homeobox 7
Obox3-ps1 7 14694074 to 14695674 1600 - pseudogene oocyte specific homeobox 3, pseudogene 1
Obox4-ps4 7 14713201 to 14713597 396 - pseudogene oocyte specific homeobox 4, pseudogene 4
Gtpbp4-ps1 7 14724656 to 14724904 248 - pseudogene GTP binding protein 4, pseudogene 1
Ranbp2-ps2 7 14756555 to 14756924 369 - pseudogene RAN binding protein 2, pseudogene 2
Obox4-ps36 7 14767725 to 14768447 722 + pseudogene oocyte specific homeobox 4, pseudogene 36
Obox4-ps37 7 14778015 to 14778290 275 + pseudogene oocyte specific homeobox 4, pseudogene 37
Gm26056 7 14778669 to 14778772 103 + snRNA gene predicted gene, 26056
Obox3-ps2 7 14800224 to 14801826 1602 - pseudogene oocyte specific homeobox 3, pseudogene 2
Obox4-ps5 7 14813268 to 14813664 396 - pseudogene oocyte specific homeobox 4, pseudogene 5
Gtpbp4-ps2 7 14837774 to 14838029 255 - pseudogene GTP binding protein 4, pseudogene 2
Ranbp2-ps3 7 14856953 to 14857340 387 - pseudogene RAN binding protein 2, pseudogene 3
Obox4-ps38 7 14867592 to 14868315 723 + pseudogene oocyte specific homeobox 4, pseudogene 38
Obox4-ps39 7 14887535 to 14888162 627 + pseudogene oocyte specific homeobox 4, pseudogene 39
Ranbp2-ps4 7 14893847 to 14894231 384 - pseudogene RAN binding protein 2, pseudogene 4
Obox4-ps6 7 14905458 to 14906181 723 + pseudogene oocyte specific homeobox 4, pseudogene 6
Gm24701 7 14912358 to 14912462 104 + snRNA gene predicted gene, 24701
Obox3-ps3 7 14931636 to 14933238 1602 - pseudogene oocyte specific homeobox 3, pseudogene 3
Obox4-ps7 7 14947537 to 14948041 504 - pseudogene oocyte specific homeobox 4, pseudogene 7
Gtpbp4-ps3 7 14965334 to 14965622 288 - pseudogene GTP binding protein 4, pseudogene 3
Ranbp2-ps5 7 14991920 to 14992298 378 - pseudogene RAN binding protein 2, pseudogene 5
Obox4-ps8 7 15007074 to 15007787 713 + pseudogene oocyte specific homeobox 4, pseudogene 8
Obox4-ps9 7 15023991 to 15025698 1707 + pseudogene oocyte specific homeobox 4, pseudogene 9
Obox3-ps4 7 15056199 to 15057804 1605 - pseudogene oocyte specific homeobox, pseudogene 4
Obox4-ps10 7 15075265 to 15075768 503 - pseudogene oocyte specific homeobox 4, pseudogene 10
Gtpbp4-ps4 7 15086769 to 15087026 257 - pseudogene GTP binding protein 4, pseudogene 4
Ranbp2-ps6 7 15118004 to 15118384 380 - pseudogene RAN binding protein 2, pseudogene 6
Obox4-ps11 7 15129168 to 15129891 723 + pseudogene oocyte specific homeobox 4, pseudogene 11
Obox4-ps12 7 15139546 to 15140821 1275 + pseudogene oocyte specific homeobox 4, pseudogene 12
Obox4-ps13 7 15150914 to 15152189 1275 + pseudogene oocyte specific homeobox 4, pseudogene 13
Obox4-ps14 7 15162244 to 15163519 1275 + pseudogene oocyte specific homeobox 4, pseudogene 14
Obox4-ps15 7 15173325 to 15174600 1275 + pseudogene oocyte specific homeobox 4, pseudogene 15
Obox4-ps16 7 15184666 to 15185941 1275 + pseudogene oocyte specific homeobox 4, pseudogene 16
Obox4-ps17 7 15195981 to 15197694 1713 + pseudogene oocyte specific homeobox 4, pseudogene 17
Obox4-ps18 7 15207312 to 15209025 1713 + pseudogene oocyte specific homeobox 4, pseudogene 18
Obox4-ps19 7 15218640 to 15220356 1716 + pseudogene oocyte specific homeobox 4, pseudogene 19
Obox4-ps20 7 15229944 to 15231660 1716 + pseudogene oocyte specific homeobox 4, pseudogene 20
Obox4-ps21 7 15241272 to 15242988 1716 + pseudogene oocyte specific homeobox 4, pseudogene 21
Obox4-ps22 7 15252612 to 15254325 1713 + pseudogene oocyte specific homeobox 4, pseudogene 22
Obox4-ps23 7 15263943 to 15265656 1713 + pseudogene oocyte specific homeobox 4, pseudogene 23
Mrip-ps 7 15288251 to 15289190 939 - pseudogene Mom radiation induced polyposis, pseudogene
Obox3-ps5 7 15293949 to 15295548 1599 - pseudogene oocyte specific homeobox 3, pseudogene 5
Obox4-ps24 7 15307039 to 15308054 1015 - pseudogene oocyte specific homeobox 4, pseudogene 24
Gtpbp4-ps5 7 15319972 to 15320260 288 - pseudogene GTP binding protein 4, pseudogene 5
Obox4-ps25 7 15333435 to 15333644 209 - pseudogene oocyte specific homeobox 4, pseudogene 25
Obox4-ps26 7 15343518 to 15344241 723 + pseudogene oocyte specific homeobox 4, pseudogene 26
Ranbp2-ps7 7 15369746 to 15370129 383 - pseudogene RAN binding protein 2, pseudogene 7
Obox2 7 15388851 to 15398545 9694 + protein coding gene oocyte specific homeobox 2
Ranbp2-ps8 7 15408520 to 15408864 344 - pseudogene RAN binding protein 2, pseudogene 8
Obox4-ps27 7 15431617 to 15433379 1762 + pseudogene oocyte specific homeobox 4, pseudogene 27
Obox4-ps28 7 15442953 to 15444715 1762 + pseudogene oocyte specific homeobox 4, pseudogene 28
Obox4-ps29 7 15454323 to 15456033 1710 + pseudogene oocyte specific homeobox 4, pseudogene 29
Obox3-ps6 7 15480174 to 15481781 1607 - pseudogene oocyte specific homeobox 3, pseudogene 6
Obox4-ps30 7 15501820 to 15502548 728 + pseudogene oocyte specific homeobox 4, pseudogene 30
Ranbp2-ps9 7 15528046 to 15528427 381 - pseudogene RAN binding protein 2, pseudogene 9
Obox1 7 15547257 to 15556846 9589 + protein coding gene oocyte specific homeobox 1
Ranbp2-ps10 7 15566485 to 15566869 384 - pseudogene RAN binding protein 2, pseudogene 10
Obox4-ps31 7 15589653 to 15591360 1707 + pseudogene oocyte specific homeobox 4, pseudogene 31
Gm25354 7 15593231 to 15593335 104 + snRNA gene predicted gene, 25354
Obox3 7 15625306 to 15639777 14471 - protein coding gene oocyte specific homeobox 3
Obox4-ps32 7 15642188 to 15643208 1020 - pseudogene oocyte specific homeobox 4, pseudogene 32
Gtpbp4-ps6 7 15653333 to 15653624 291 - pseudogene GTP binding protein 4, pseudogene 6
Obox4-ps33 7 15691650 to 15693360 1710 + pseudogene oocyte specific homeobox 4, pseudogene 33
Gm23714 7 15695213 to 15695317 104 + snRNA gene predicted gene, 23714
Obox4-ps34 7 15719766 to 15720132 366 + pseudogene oocyte specific homeobox 4, pseudogene 34
Ranbp2-ps11 7 15725926 to 15726312 386 - pseudogene RAN binding protein 2, pseudogene 11
Obox5 7 15750370 to 15759274 8904 + protein coding gene oocyte specific homeobox 5
Ranbp2-ps12 7 15766814 to 15767199 385 - pseudogene RAN binding protein 2, pseudogene 12
Gtpbp4-ps7 7 15787864 to 15788160 296 - pseudogene GTP binding protein 4, pseudogene 7
Obox4-ps35 7 15820167 to 15825815 5648 - pseudogene oocyte specific homeobox 4, pseudogene 35
Obox6 7 15833250 to 15839679 6429 - protein coding gene oocyte specific homeobox 6
Crx 7 15865947 to 15879955 14008 - protein coding gene cone-rod homeobox
Tssr70676 7 15873187 to 15873194 7 - TSS region transcription start site region 70676
Tssr70677 7 15879880 to 15879900 20 - TSS region transcription start site region 70677
Tssr64557 7 15881621 to 15881630 9 + TSS region transcription start site region 64557
Tssr64558 7 15881646 to 15881668 22 + TSS region transcription start site region 64558
Tssr64559 7 15881681 to 15881686 5 + TSS region transcription start site region 64559
Tssr64560 7 15881690 to 15881693 3 + TSS region transcription start site region 64560
Tssr64561 7 15881696 to 15881715 19 + TSS region transcription start site region 64561
116J6.1 7 15881700 to 15881921 221 DNA segment DNA segment, 116J6.1
Crxos 7 15882617 to 15904020 21403 + protein coding gene cone-rod homeobox, opposite strand
Tssr64562 7 15885143 to 15885155 12 + TSS region transcription start site region 64562
Tssr64563 7 15886164 to 15886173 9 + TSS region transcription start site region 64563
Tssr64564 7 15896165 to 15896176 11 + TSS region transcription start site region 64564
Tssr64565 7 15901656 to 15901665 9 + TSS region transcription start site region 64565
Ass-ps1 7 15906681 to 15907592 911 + pseudogene argininosuccinate synthetase pseudogene 1
Selenow 7 15917208 to 15922371 5163 - protein coding gene selenoprotein W
Tssr70678 7 15917337 to 15917433 96 - TSS region transcription start site region 70678
Tssr64566 7 15917349 to 15917382 33 + TSS region transcription start site region 64566
Tssr70679 7 15920099 to 15920114 15 - TSS region transcription start site region 70679
Tssr70680 7 15920667 to 15920692 25 - TSS region transcription start site region 70680
Tssr70681 7 15920778 to 15920791 13 - TSS region transcription start site region 70681
Cpgi18341 7 15921933 to 15922699 766 CpG island CpG island 18341
Tssr70682 7 15922302 to 15922313 11 - TSS region transcription start site region 70682
Tssr70683 7 15922335 to 15922357 22 - TSS region transcription start site region 70683
Tssr70684 7 15922361 to 15922378 17 - TSS region transcription start site region 70684
Nop53 7 15937835 to 15946108 8273 - protein coding gene NOP53 ribosome biogenesis factor
Snord23 7 15938762 to 15938860 98 - snoRNA gene small nucleolar RNA, C/D box 23
Cpgi18342 7 15945566 to 15946252 686 CpG island CpG island 18342
Tssr70685 7 15945784 to 15945808 24 - TSS region transcription start site region 70685
Tssr70686 7 15946023 to 15946034 11 - TSS region transcription start site region 70686
Tssr70687 7 15946057 to 15946069 12 - TSS region transcription start site region 70687
Tssr70688 7 15946070 to 15946105 35 - TSS region transcription start site region 70688
Gm24576 7 15946248 to 15946495 247 + lncRNA gene predicted gene, 24576
Ehd2 7 15946963 to 15967535 20572 - protein coding gene EH-domain containing 2
Cpgi18343 7 15948412 to 15948826 414 CpG island CpG island 18343
Tssr70689 7 15950027 to 15950043 16 - TSS region transcription start site region 70689
Tssr70690 7 15950088 to 15950092 4 - TSS region transcription start site region 70690
Tssr70691 7 15950282 to 15950321 39 - TSS region transcription start site region 70691
Cpgi18344 7 15950383 to 15950745 362 CpG island CpG island 18344
Cpgi18345 7 15957460 to 15957937 477 CpG island CpG island 18345
Tssr70692 7 15959552 to 15959566 14 - TSS region transcription start site region 70692
Tssr70693 7 15959784 to 15959795 11 - TSS region transcription start site region 70693
Tssr70694 7 15959818 to 15959832 14 - TSS region transcription start site region 70694
Cpgi18346 7 15963936 to 15964292 356 CpG island CpG island 18346
Tssr70695 7 15964372 to 15964427 55 - TSS region transcription start site region 70695
Cpgi18347 7 15967335 to 15967637 302 CpG island CpG island 18347
Tssr70696 7 15967470 to 15967484 14 - TSS region transcription start site region 70696
Bicra 7 15970672 to 16047921 77249 - protein coding gene BRD4 interacting chromatin remodeling complex associated protein
Cpgi18348 7 15971940 to 15972739 799 CpG island CpG island 18348
Gm38948 7 15980710 to 15984800 4090 + lincRNA gene predicted gene, 38948
Tssr64567 7 16004684 to 16004696 12 + TSS region transcription start site region 64567
Tssr70697 7 16018238 to 16018251 13 - TSS region transcription start site region 70697
Tssr70698 7 16044493 to 16044498 5 - TSS region transcription start site region 70698
Cpgi18349 7 16046523 to 16049093 2570 CpG island CpG island 18349
Gm32059 7 16046582 to 16047666 1084 + lncRNA gene predicted gene, 32059
Tssr64568 7 16046602 to 16046617 15 + TSS region transcription start site region 64568
Tssr70699 7 16047638 to 16047643 5 - TSS region transcription start site region 70699
Tssr70700 7 16047912 to 16047947 35 - TSS region transcription start site region 70700
Tssr70701 7 16048053 to 16048082 29 - TSS region transcription start site region 70701
Tssr70702 7 16048111 to 16048123 12 - TSS region transcription start site region 70702
Tssr64569 7 16048380 to 16048447 67 + TSS region transcription start site region 64569
2010004M13Rik 7 16048444 to 16049057 613 unclassified gene RIKEN cDNA 2010004M13 gene
Cpgi18350 7 16052709 to 16053104 395 CpG island CpG island 18350
Tssr70703 7 16052807 to 16052827 20 - TSS region transcription start site region 70703
Cpgi18351 7 16061307 to 16062278 971 CpG island CpG island 18351
Tssr64570 7 16061780 to 16061793 13 + TSS region transcription start site region 64570
Tssr64571 7 16061810 to 16061820 10 + TSS region transcription start site region 64571
Zfp541 7 16061814 to 16096334 34520 + protein coding gene zinc finger protein 541
Tssr64572 7 16061840 to 16061867 27 + TSS region transcription start site region 64572
Tssr64573 7 16061868 to 16061886 18 + TSS region transcription start site region 64573
Tssr64574 7 16061901 to 16061913 12 + TSS region transcription start site region 64574
Tssr64575 7 16062739 to 16062743 4 + TSS region transcription start site region 64575
Cpgi18352 7 16098098 to 16099117 1019 CpG island CpG island 18352
Napa 7 16098458 to 16117975 19517 + protein coding gene N-ethylmaleimide sensitive fusion protein attachment protein alpha
Tssr64576 7 16098574 to 16098585 11 + TSS region transcription start site region 64576
Tssr64577 7 16098595 to 16098672 77 + TSS region transcription start site region 64577
Tssr64578 7 16116719 to 16116740 21 + TSS region transcription start site region 64578
Cpgi18353 7 16119836 to 16120305 469 CpG island CpG island 18353
Tssr64579 7 16119868 to 16119907 39 + TSS region transcription start site region 64579
Kptn 7 16119895 to 16127516 7621 + protein coding gene kaptin
Cpgi18354 7 16129514 to 16129710 196 CpG island CpG island 18354
Tssr64580 7 16129756 to 16129845 89 + TSS region transcription start site region 64580
Slc8a2 7 16129826 to 16161063 31237 + protein coding gene solute carrier family 8 (sodium/calcium exchanger), member 2
Tssr64581 7 16130145 to 16130170 25 + TSS region transcription start site region 64581
Tssr64582 7 16130178 to 16130189 11 + TSS region transcription start site region 64582
Tssr64583 7 16130252 to 16130269 17 + TSS region transcription start site region 64583
Cpgi18355 7 16130257 to 16130816 559 CpG island CpG island 18355
Tssr64584 7 16130271 to 16130283 12 + TSS region transcription start site region 64584
Tssr64585 7 16130285 to 16130333 48 + TSS region transcription start site region 64585
Tssr64586 7 16130340 to 16130366 26 + TSS region transcription start site region 64586
Cpgi18356 7 16140430 to 16141211 781 CpG island CpG island 18356
Cpgi18357 7 16144769 to 16145603 834 CpG island CpG island 18357
C030044M21Rik 7 16146161 to 16147386 1225 unclassified gene RIKEN cDNA C030044M21 gene
Cpgi18358 7 16146589 to 16146870 281 CpG island CpG island 18358
Cpgi18359 7 16158668 to 16159310 642 CpG island CpG island 18359
Tssr64587 7 16160184 to 16160194 10 + TSS region transcription start site region 64587
Tssr64588 7 16160195 to 16160210 15 + TSS region transcription start site region 64588
Cpgi18360 7 16175011 to 16175831 820 CpG island CpG island 18360
Tssr64589 7 16175085 to 16175104 19 + TSS region transcription start site region 64589
Meis3 7 16175096 to 16186510 11414 + protein coding gene Meis homeobox 3
Tssr64590 7 16175342 to 16175356 14 + TSS region transcription start site region 64590
Tssr64591 7 16175358 to 16175438 80 + TSS region transcription start site region 64591