Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:142662272-142982499

34 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Igf2	7	142650768 to 142666816	16048	-	protein coding gene	insulin-like growth factor 2
Gm49394	7	142650769 to 142669942	19173	-	protein coding gene	predicted gene, 49394
Igf2os	7	142659693 to 142670356	10663	+	antisense lncRNA gene	insulin-like growth factor 2, opposite strand
Cpgi19969	7	142663847 to 142664779	932		CpG island	CpG island 19969
Tssr75901	7	142664663 to 142664690	27	-	TSS region	transcription start site region 75901
Tssr75902	7	142664694 to 142664713	19	-	TSS region	transcription start site region 75902
Tssr75903	7	142664785 to 142664831	46	-	TSS region	transcription start site region 75903
Tssr70256	7	142665129 to 142665157	28	+	TSS region	transcription start site region 70256
Tssr70257	7	142665785 to 142665794	9	+	TSS region	transcription start site region 70257
Tssr70258	7	142665803 to 142665820	17	+	TSS region	transcription start site region 70258
Tssr75904	7	142666204 to 142666221	17	-	TSS region	transcription start site region 75904
Tssr75905	7	142666819 to 142666842	23	-	TSS region	transcription start site region 75905
Gm46005	7	142668178 to 142669709	1531	-	lncRNA gene	predicted gene, 46005
Tssr75906	7	142669930 to 142669937	7	-	TSS region	transcription start site region 75906
Dp(7Gm7290-Th)1Lef	7	142678656 to 142969264	290608		chromosomal duplication	duplication, Chr 7, Louis Lefebvre 1
Ins2	7	142678656 to 142679726	1070	-	protein coding gene	insulin II
Tssr70259	7	142678686 to 142678711	25	+	TSS region	transcription start site region 70259
Tssr75907	7	142678699 to 142678712	13	-	TSS region	transcription start site region 75907
Tssr75908	7	142679701 to 142679714	13	-	TSS region	transcription start site region 75908
Del(7Gm7290-Th)1Lef	7	142682272 to 142962499	280227		chromosomal deletion	deletion, Chr 7, Louis Lefebvre 1
Tssr75909	7	142699521 to 142699529	8	-	TSS region	transcription start site region 75909
Gm39116	7	142713797 to 142743246	29449	-	lncRNA gene	predicted gene, 39116
Gm7290	7	142757236 to 142757852	616	-	pseudogene	predicted pseudogene 7290
Tssr70260	7	142790510 to 142790515	5	+	TSS region	transcription start site region 70260
Gm6471	7	142815252 to 142852266	37014	+	lincRNA gene	predicted gene 6471
Gm39117	7	142844604 to 142857205	12601	-	lincRNA gene	predicted gene, 39117
Th	7	142892776 to 142899966	7190	-	protein coding gene	tyrosine hydroxylase
Tssr75910	7	142899985 to 142900002	17	-	TSS region	transcription start site region 75910
Ascl2	7	142966829 to 142969264	2435	-	protein coding gene	achaete-scute family bHLH transcription factor 2
Cpgi19970	7	142967201 to 142969612	2411		CpG island	CpG island 19970
Tssr75911	7	142968204 to 142968225	21	-	TSS region	transcription start site region 75911
Tssr75912	7	142968760 to 142968777	17	-	TSS region	transcription start site region 75912
Tssr75913	7	142969238 to 142969251	13	-	TSS region	transcription start site region 75913
Tssr75914	7	142969258 to 142969269	11	-	TSS region	transcription start site region 75914