Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:142658204-143278225

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134 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Igf2 7 142650768 to 142666816 16048 - protein coding gene insulin-like growth factor 2
Gm49394 7 142650769 to 142669942 19173 - protein coding gene predicted gene, 49394
Cpgi19967 7 142658270 to 142660217 1947 CpG island CpG island 19967
Tssr70241 7 142658532 to 142658585 53 + TSS region transcription start site region 70241
Tssr70242 7 142658596 to 142658629 33 + TSS region transcription start site region 70242
Tssr75888 7 142658757 to 142658767 10 - TSS region transcription start site region 75888
Tssr70243 7 142658860 to 142658899 39 + TSS region transcription start site region 70243
Tssr70244 7 142658910 to 142658953 43 + TSS region transcription start site region 70244
Tssr70245 7 142659021 to 142659032 11 + TSS region transcription start site region 70245
Tssr70246 7 142659103 to 142659115 12 + TSS region transcription start site region 70246
Tssr70247 7 142659149 to 142659178 29 + TSS region transcription start site region 70247
Tssr70248 7 142659224 to 142659252 28 + TSS region transcription start site region 70248
Tssr75889 7 142659482 to 142659497 15 - TSS region transcription start site region 75889
Igf2os 7 142659693 to 142670356 10663 + antisense lncRNA gene insulin-like growth factor 2, opposite strand
Cpgi19968 7 142660230 to 142661435 1205 CpG island CpG island 19968
Tssr70249 7 142660334 to 142660343 9 + TSS region transcription start site region 70249
Tssr70250 7 142660454 to 142660459 5 + TSS region transcription start site region 70250
Tssr70251 7 142660480 to 142660497 17 + TSS region transcription start site region 70251
Tssr70252 7 142660577 to 142660584 7 + TSS region transcription start site region 70252
Tssr70253 7 142660623 to 142660648 25 + TSS region transcription start site region 70253
Tssr70254 7 142660654 to 142660667 13 + TSS region transcription start site region 70254
Tssr70255 7 142660731 to 142660760 29 + TSS region transcription start site region 70255
Tssr75890 7 142660864 to 142660865 1 - TSS region transcription start site region 75890
Tssr2464 7 142660885 to 142660921 36 - TSS region transcription start site region 2464
Tssr75891 7 142660977 to 142660988 11 - TSS region transcription start site region 75891
Tssr75892 7 142660989 to 142661040 51 - TSS region transcription start site region 75892
Tssr75893 7 142661043 to 142661058 15 - TSS region transcription start site region 75893
Tssr2465 7 142661080 to 142661084 4 - TSS region transcription start site region 2465
Tssr2466 7 142661103 to 142661104 1 - TSS region transcription start site region 2466
Tssr75894 7 142661188 to 142661206 18 - TSS region transcription start site region 75894
Tssr75895 7 142661226 to 142661238 12 - TSS region transcription start site region 75895
Tssr75896 7 142661254 to 142661269 15 - TSS region transcription start site region 75896
Tssr75897 7 142661273 to 142661287 14 - TSS region transcription start site region 75897
Tssr75898 7 142661305 to 142661314 9 - TSS region transcription start site region 75898
Tssr75899 7 142661843 to 142661857 14 - TSS region transcription start site region 75899
Tssr75900 7 142661858 to 142661880 22 - TSS region transcription start site region 75900
Cpgi19969 7 142663847 to 142664779 932 CpG island CpG island 19969
Tssr75901 7 142664663 to 142664690 27 - TSS region transcription start site region 75901
Tssr75902 7 142664694 to 142664713 19 - TSS region transcription start site region 75902
Tssr75903 7 142664785 to 142664831 46 - TSS region transcription start site region 75903
Tssr70256 7 142665129 to 142665157 28 + TSS region transcription start site region 70256
Tssr70257 7 142665785 to 142665794 9 + TSS region transcription start site region 70257
Tssr70258 7 142665803 to 142665820 17 + TSS region transcription start site region 70258
Tssr75904 7 142666204 to 142666221 17 - TSS region transcription start site region 75904
Tssr75905 7 142666819 to 142666842 23 - TSS region transcription start site region 75905
Gm46005 7 142668178 to 142669709 1531 - lncRNA gene predicted gene, 46005
Tssr75906 7 142669930 to 142669937 7 - TSS region transcription start site region 75906
Dp(7Gm7290-Th)1Lef 7 142678656 to 142969264 290608 chromosomal duplication duplication, Chr 7, Louis Lefebvre 1
Ins2 7 142678656 to 142679726 1070 - protein coding gene insulin II
Tssr70259 7 142678686 to 142678711 25 + TSS region transcription start site region 70259
Tssr75907 7 142678699 to 142678712 13 - TSS region transcription start site region 75907
Tssr75908 7 142679701 to 142679714 13 - TSS region transcription start site region 75908
Del(7Gm7290-Th)1Lef 7 142682272 to 142962499 280227 chromosomal deletion deletion, Chr 7, Louis Lefebvre 1
Tssr75909 7 142699521 to 142699529 8 - TSS region transcription start site region 75909
Gm39116 7 142713797 to 142743246 29449 - lncRNA gene predicted gene, 39116
Gm7290 7 142757236 to 142757852 616 - pseudogene predicted pseudogene 7290
Tssr70260 7 142790510 to 142790515 5 + TSS region transcription start site region 70260
Gm6471 7 142815252 to 142852266 37014 + lincRNA gene predicted gene 6471
Gm39117 7 142844604 to 142857205 12601 - lincRNA gene predicted gene, 39117
Th 7 142892776 to 142899966 7190 - protein coding gene tyrosine hydroxylase
Tssr75910 7 142899985 to 142900002 17 - TSS region transcription start site region 75910
Ascl2 7 142966829 to 142969264 2435 - protein coding gene achaete-scute family bHLH transcription factor 2
Cpgi19970 7 142967201 to 142969612 2411 CpG island CpG island 19970
Tssr75911 7 142968204 to 142968225 21 - TSS region transcription start site region 75911
Tssr75912 7 142968760 to 142968777 17 - TSS region transcription start site region 75912
Tssr75913 7 142969238 to 142969251 13 - TSS region transcription start site region 75913
Tssr75914 7 142969258 to 142969269 11 - TSS region transcription start site region 75914
Tspan32os 7 142988969 to 143008033 19064 - antisense lncRNA gene tetraspanin 32, opposite strand
Tspan32 7 143004899 to 143019486 14587 + protein coding gene tetraspanin 32
Tssr70261 7 143005058 to 143005105 47 + TSS region transcription start site region 70261
Tssr70262 7 143005649 to 143005673 24 + TSS region transcription start site region 70262
Tssr70263 7 143005677 to 143005703 26 + TSS region transcription start site region 70263
Tssr70264 7 143005718 to 143005735 17 + TSS region transcription start site region 70264
Tssr70265 7 143005738 to 143005757 19 + TSS region transcription start site region 70265
Tssr70266 7 143005770 to 143005784 14 + TSS region transcription start site region 70266
Tssr75915 7 143008605 to 143008611 6 - TSS region transcription start site region 75915
Tssr75916 7 143008697 to 143008713 16 - TSS region transcription start site region 75916
R74862 7 143021784 to 143053686 31902 - lncRNA gene expressed sequence R74862
Tssr70267 7 143026616 to 143026617 1 + TSS region transcription start site region 70267
Cpgi19971 7 143052428 to 143053680 1252 CpG island CpG island 19971
Cd81 7 143052750 to 143067930 15180 + protein coding gene CD81 antigen
Tssr70268 7 143052752 to 143052763 11 + TSS region transcription start site region 70268
Tssr70269 7 143052776 to 143052797 21 + TSS region transcription start site region 70269
Tssr75917 7 143053379 to 143053459 80 - TSS region transcription start site region 75917
Tssr70270 7 143053474 to 143053483 9 + TSS region transcription start site region 70270
Tssr70271 7 143053517 to 143053543 26 + TSS region transcription start site region 70271
Tssr70272 7 143053554 to 143053569 15 + TSS region transcription start site region 70272
Tssr70273 7 143064948 to 143064959 11 + TSS region transcription start site region 70273
Tssr70274 7 143064969 to 143064977 8 + TSS region transcription start site region 70274
Tssr70275 7 143065754 to 143065763 9 + TSS region transcription start site region 70275
Tssr70276 7 143065784 to 143065794 10 + TSS region transcription start site region 70276
Tssr70277 7 143065933 to 143065949 16 + TSS region transcription start site region 70277
Tssr70278 7 143066730 to 143066739 9 + TSS region transcription start site region 70278
Tssr70279 7 143067365 to 143067388 23 + TSS region transcription start site region 70279
Tssr70280 7 143067401 to 143067476 75 + TSS region transcription start site region 70280
Tssr70281 7 143067535 to 143067541 6 + TSS region transcription start site region 70281
Cpgi19972 7 143068887 to 143070216 1329 CpG island CpG island 19972
Tssr2467 7 143068947 to 143068955 8 - TSS region transcription start site region 2467
Tssc4 7 143069249 to 143071093 1844 + protein coding gene tumor-suppressing subchromosomal transferable fragment 4
Tssr70282 7 143069397 to 143069500 103 + TSS region transcription start site region 70282
Tssr2468 7 143069504 to 143069531 27 + TSS region transcription start site region 2468
Trpm5 7 143071529 to 143094642 23113 - protein coding gene transient receptor potential cation channel, subfamily M, member 5
Tssr75918 7 143079555 to 143079584 29 - TSS region transcription start site region 75918
Tssr75919 7 143087115 to 143087155 40 - TSS region transcription start site region 75919
Tssr75920 7 143087208 to 143087219 11 - TSS region transcription start site region 75920
Tssr75921 7 143094005 to 143094041 36 - TSS region transcription start site region 75921
Tssr75922 7 143099876 to 143099877 1 - TSS region transcription start site region 75922
Tssr2469 7 143106358 to 143106364 6 + TSS region transcription start site region 2469
Cpgi19973 7 143106637 to 143107954 1317 CpG island CpG island 19973
Kcnq1 7 143106742 to 143427050 320308 + protein coding gene potassium voltage-gated channel, subfamily Q, member 1
Tssr70283 7 143107234 to 143107250 16 + TSS region transcription start site region 70283
Tssr70284 7 143107252 to 143107286 34 + TSS region transcription start site region 70284
Tssr70285 7 143107300 to 143107314 14 + TSS region transcription start site region 70285
Tssr70286 7 143109227 to 143109255 28 + TSS region transcription start site region 70286
Gm38321 7 143124569 to 143124803 234 + unclassified gene predicted gene, 38321
Gm37235 7 143127792 to 143127850 58 + unclassified gene predicted gene, 37235
Gm28821 7 143135031 to 143140608 5577 - antisense lncRNA gene predicted gene 28821
Cpgi19974 7 143153973 to 143154216 243 CpG island CpG island 19974
Cpgi19975 7 143154541 to 143154804 263 CpG island CpG island 19975
Tssr2470 7 143166045 to 143166047 2 + TSS region transcription start site region 2470
D7Mit175 7 143209639 to 143209745 106 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 175
Kcnq1ot1 7 143213111 to 143296547 83436 - antisense lncRNA gene KCNQ1 overlapping transcript 1
Tssr75923 7 143230270 to 143230282 12 - TSS region transcription start site region 75923
Tssr75924 7 143238090 to 143238103 13 - TSS region transcription start site region 75924
Tssr75925 7 143238196 to 143238209 13 - TSS region transcription start site region 75925
Tssr75926 7 143241422 to 143241441 19 - TSS region transcription start site region 75926
Tssr75927 7 143242452 to 143242474 22 - TSS region transcription start site region 75927
Tssr75928 7 143242568 to 143242583 15 - TSS region transcription start site region 75928
Tssr75929 7 143242712 to 143242720 8 - TSS region transcription start site region 75929
Tssr75930 7 143250465 to 143250472 7 - TSS region transcription start site region 75930
Gm27395 7 143251367 to 143251826 459 + unclassified non-coding RNA gene predicted gene, 27395
Gm27389 7 143273053 to 143273247 194 + unclassified non-coding RNA gene predicted gene, 27389
Gm27803 7 143273566 to 143273684 118 + unclassified non-coding RNA gene predicted gene, 27803
Tssr75931 7 143273770 to 143273775 5 - TSS region transcription start site region 75931