Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:142386605-142616628

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164 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ctsd 7 142375916 to 142387870 11954 - protein coding gene cathepsin D
Tssr75793 7 142386671 to 142386683 12 - TSS region transcription start site region 75793
Tssr75794 7 142386825 to 142386848 23 - TSS region transcription start site region 75794
Tssr75795 7 142386849 to 142386879 30 - TSS region transcription start site region 75795
Tssr70147 7 142387000 to 142387011 11 + TSS region transcription start site region 70147
Cpgi19961 7 142387433 to 142388181 748 CpG island CpG island 19961
Tssr75796 7 142387820 to 142387845 25 - TSS region transcription start site region 75796
Tssr75797 7 142387853 to 142387885 32 - TSS region transcription start site region 75797
Tssr75798 7 142387895 to 142387906 11 - TSS region transcription start site region 75798
Tssr75799 7 142387919 to 142387935 16 - TSS region transcription start site region 75799
Tssr70148 7 142388170 to 142388207 37 + TSS region transcription start site region 70148
Tssr70149 7 142388226 to 142388239 13 + TSS region transcription start site region 70149
Tssr70150 7 142390186 to 142390196 10 + TSS region transcription start site region 70150
Tssr70151 7 142390262 to 142390274 12 + TSS region transcription start site region 70151
Tssr70152 7 142390278 to 142390293 15 + TSS region transcription start site region 70152
Tssr70153 7 142390295 to 142390329 34 + TSS region transcription start site region 70153
Tssr75800 7 142398063 to 142398072 9 - TSS region transcription start site region 75800
Tssr75801 7 142398074 to 142398083 9 - TSS region transcription start site region 75801
Tssr70154 7 142398276 to 142398285 9 + TSS region transcription start site region 70154
Tssr75802 7 142399384 to 142399391 7 - TSS region transcription start site region 75802
Tssr70155 7 142399488 to 142399499 11 + TSS region transcription start site region 70155
Tssr70156 7 142399578 to 142399614 36 + TSS region transcription start site region 70156
Tssr70157 7 142399643 to 142399671 28 + TSS region transcription start site region 70157
Gm26143 7 142424795 to 142424902 107 + snRNA gene predicted gene, 26143
Cpgi19962 7 142433714 to 142433954 240 CpG island CpG island 19962
Tssr70158 7 142434772 to 142434789 17 + TSS region transcription start site region 70158
Tssr70159 7 142434795 to 142434817 22 + TSS region transcription start site region 70159
Syt8 7 142434850 to 142440396 5546 + protein coding gene synaptotagmin VIII
Tssr70160 7 142434932 to 142434970 38 + TSS region transcription start site region 70160
Tssr70161 7 142434980 to 142434991 11 + TSS region transcription start site region 70161
Tssr70162 7 142441808 to 142441825 17 + TSS region transcription start site region 70162
Tnni2 7 142441808 to 142444410 2602 + protein coding gene troponin I, skeletal, fast 2
Tssr70163 7 142442299 to 142442310 11 + TSS region transcription start site region 70163
Tssr70164 7 142442349 to 142442354 5 + TSS region transcription start site region 70164
Tssr70165 7 142442356 to 142442367 11 + TSS region transcription start site region 70165
Tssr70166 7 142442370 to 142442373 3 + TSS region transcription start site region 70166
Tssr70167 7 142442376 to 142442421 45 + TSS region transcription start site region 70167
Tssr70168 7 142442891 to 142442902 11 + TSS region transcription start site region 70168
Tssr70169 7 142442965 to 142442997 32 + TSS region transcription start site region 70169
Tssr75803 7 142443358 to 142443385 27 - TSS region transcription start site region 75803
Tssr75804 7 142443614 to 142443627 13 - TSS region transcription start site region 75804
Tssr75805 7 142443630 to 142443660 30 - TSS region transcription start site region 75805
Tssr75806 7 142444066 to 142444093 27 - TSS region transcription start site region 75806
Lsp1 7 142460812 to 142494868 34056 + protein coding gene lymphocyte specific 1
Tssr70170 7 142460823 to 142460832 9 + TSS region transcription start site region 70170
Tssr70171 7 142460834 to 142460886 52 + TSS region transcription start site region 70171
Tssr2454 7 142461483 to 142461514 31 - TSS region transcription start site region 2454
Tssr70172 7 142466788 to 142466834 46 + TSS region transcription start site region 70172
Tssr70173 7 142466932 to 142466941 9 + TSS region transcription start site region 70173
Tssr2455 7 142471434 to 142471453 19 + TSS region transcription start site region 2455
Tssr70174 7 142471758 to 142471777 19 + TSS region transcription start site region 70174
Tssr70175 7 142471838 to 142471910 72 + TSS region transcription start site region 70175
Tssr2456 7 142472001 to 142472012 11 + TSS region transcription start site region 2456
Tssr70176 7 142472080 to 142472093 13 + TSS region transcription start site region 70176
Tssr75807 7 142472102 to 142472153 51 - TSS region transcription start site region 75807
Tssr70177 7 142474990 to 142475001 11 + TSS region transcription start site region 70177
Tssr70178 7 142475044 to 142475092 48 + TSS region transcription start site region 70178
Tssr70179 7 142475172 to 142475205 33 + TSS region transcription start site region 70179
Tssr70180 7 142477007 to 142477018 11 + TSS region transcription start site region 70180
Tssr70181 7 142477047 to 142477057 10 + TSS region transcription start site region 70181
Tssr70182 7 142481378 to 142481389 11 + TSS region transcription start site region 70182
Cpgi19963 7 142481737 to 142481915 178 CpG island CpG island 19963
Tssr70183 7 142488834 to 142488850 16 + TSS region transcription start site region 70183
Tssr70184 7 142488995 to 142489007 12 + TSS region transcription start site region 70184
Tssr70185 7 142489039 to 142489068 29 + TSS region transcription start site region 70185
Tssr70186 7 142489176 to 142489195 19 + TSS region transcription start site region 70186
Tssr70187 7 142489300 to 142489328 28 + TSS region transcription start site region 70187
Tssr70188 7 142489401 to 142489415 14 + TSS region transcription start site region 70188
Prr33 7 142491080 to 142506771 15691 - protein coding gene proline rich 33
Tssr70189 7 142494243 to 142494260 17 + TSS region transcription start site region 70189
Tssr70190 7 142494870 to 142494878 8 + TSS region transcription start site region 70190
Tssr75808 7 142496926 to 142496979 53 - TSS region transcription start site region 75808
Tssr70191 7 142498832 to 142498849 17 + TSS region transcription start site region 70191
Tnnt3 7 142498836 to 142516009 17173 + protein coding gene troponin T3, skeletal, fast
Tssr70192 7 142500230 to 142500244 14 + TSS region transcription start site region 70192
Tssr70193 7 142500260 to 142500333 73 + TSS region transcription start site region 70193
Tssr70194 7 142501605 to 142501628 23 + TSS region transcription start site region 70194
Tssr70195 7 142502720 to 142502728 8 + TSS region transcription start site region 70195
Tssr70196 7 142507720 to 142507755 35 + TSS region transcription start site region 70196
Tssr70197 7 142509923 to 142509925 2 + TSS region transcription start site region 70197
Tssr70198 7 142510655 to 142510675 20 + TSS region transcription start site region 70198
Tssr70199 7 142511271 to 142511315 44 + TSS region transcription start site region 70199
Tssr70200 7 142511337 to 142511352 15 + TSS region transcription start site region 70200
Tssr70201 7 142511474 to 142511501 27 + TSS region transcription start site region 70201
Tssr2457 7 142511515 to 142511526 11 + TSS region transcription start site region 2457
Tssr70202 7 142512033 to 142512045 12 + TSS region transcription start site region 70202
Tssr70203 7 142512052 to 142512070 18 + TSS region transcription start site region 70203
Tssr75809 7 142512071 to 142512110 39 - TSS region transcription start site region 75809
Tssr75810 7 142512127 to 142512152 25 - TSS region transcription start site region 75810
Tssr70204 7 142512247 to 142512256 9 + TSS region transcription start site region 70204
Tssr70205 7 142512266 to 142512280 14 + TSS region transcription start site region 70205
Tssr75811 7 142512281 to 142512304 23 - TSS region transcription start site region 75811
Cpgi19964 7 142532689 to 142533828 1139 CpG island CpG island 19964
Mrpl23 7 142532724 to 142540747 8023 + protein coding gene mitochondrial ribosomal protein L23
Tssr70206 7 142533043 to 142533054 11 + TSS region transcription start site region 70206
Tssr2458 7 142533135 to 142533142 7 + TSS region transcription start site region 2458
Tssr70207 7 142533144 to 142533174 30 + TSS region transcription start site region 70207
Tssr70208 7 142533546 to 142533573 27 + TSS region transcription start site region 70208
Tssr70209 7 142534583 to 142534598 15 + TSS region transcription start site region 70209
Tssr70210 7 142538993 to 142539001 8 + TSS region transcription start site region 70210
D7Mit174 7 142543613 to 142543722 109 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 174
Nctc1 7 142544609 to 142558596 13987 - lncRNA gene non-coding transcript 1
Tssr70211 7 142555605 to 142555622 17 + TSS region transcription start site region 70211
Tssr2459 7 142558581 to 142558584 3 - TSS region transcription start site region 2459
Tssr75812 7 142558590 to 142558605 15 - TSS region transcription start site region 75812
H19 7 142575529 to 142578143 2614 - lincRNA gene H19, imprinted maternally expressed transcript
Tssr70212 7 142575530 to 142575534 4 + TSS region transcription start site region 70212
Tssr75813 7 142575554 to 142575577 23 - TSS region transcription start site region 75813
Tssr75814 7 142575616 to 142575629 13 - TSS region transcription start site region 75814
Tssr75815 7 142575779 to 142575793 14 - TSS region transcription start site region 75815
Tssr75816 7 142575838 to 142575854 16 - TSS region transcription start site region 75816
Tssr75817 7 142575923 to 142576017 94 - TSS region transcription start site region 75817
Tssr70213 7 142575989 to 142576071 82 + TSS region transcription start site region 70213
Tssr75818 7 142576022 to 142576093 71 - TSS region transcription start site region 75818
Tssr75819 7 142576221 to 142576263 42 - TSS region transcription start site region 75819
Tssr75820 7 142576266 to 142576314 48 - TSS region transcription start site region 75820
Tssr75821 7 142576316 to 142576327 11 - TSS region transcription start site region 75821
Tssr75822 7 142576432 to 142576488 56 - TSS region transcription start site region 75822
Tssr75823 7 142576492 to 142576531 39 - TSS region transcription start site region 75823
Tssr75824 7 142576547 to 142576564 17 - TSS region transcription start site region 75824
Tssr70214 7 142576611 to 142576653 42 + TSS region transcription start site region 70214
Tssr75825 7 142576668 to 142576688 20 - TSS region transcription start site region 75825
Tssr75826 7 142576718 to 142576736 18 - TSS region transcription start site region 75826
Tssr75827 7 142576743 to 142576756 13 - TSS region transcription start site region 75827
Gm27483 7 142576853 to 142576923 70 + unclassified non-coding RNA gene predicted gene, 27483
Tssr75828 7 142576887 to 142576888 1 - TSS region transcription start site region 75828
Tssr70215 7 142576948 to 142576976 28 + TSS region transcription start site region 70215
Tssr70216 7 142576985 to 142577040 55 + TSS region transcription start site region 70216
Tssr70217 7 142577042 to 142577057 15 + TSS region transcription start site region 70217
Mir675 7 142577064 to 142577147 83 - miRNA gene microRNA 675
Tssr2460 7 142577243 to 142577260 17 + TSS region transcription start site region 2460
Tssr75829 7 142577364 to 142577378 14 - TSS region transcription start site region 75829
Tssr70218 7 142577373 to 142577407 34 + TSS region transcription start site region 70218
Tssr75830 7 142577394 to 142577405 11 - TSS region transcription start site region 75830
Tssr70219 7 142577412 to 142577445 33 + TSS region transcription start site region 70219
Tssr75831 7 142577414 to 142577426 12 - TSS region transcription start site region 75831
Tssr75832 7 142577487 to 142577492 5 - TSS region transcription start site region 75832
Tssr70220 7 142577505 to 142577557 52 + TSS region transcription start site region 70220
Tssr75833 7 142577564 to 142577569 5 - TSS region transcription start site region 75833
Tssr70221 7 142577586 to 142577596 10 + TSS region transcription start site region 70221
Tssr70222 7 142577601 to 142577654 53 + TSS region transcription start site region 70222
Tssr70223 7 142577773 to 142577796 23 + TSS region transcription start site region 70223
Tssr70224 7 142577830 to 142577841 11 + TSS region transcription start site region 70224
Tssr75834 7 142577830 to 142577843 13 - TSS region transcription start site region 75834
Gm27786 7 142577849 to 142577918 69 + unclassified non-coding RNA gene predicted gene, 27786
Tssr75835 7 142577866 to 142577875 9 - TSS region transcription start site region 75835
Tssr70225 7 142577868 to 142577879 11 + TSS region transcription start site region 70225
Tssr75836 7 142577888 to 142577897 9 - TSS region transcription start site region 75836
Tssr75837 7 142577908 to 142577920 12 - TSS region transcription start site region 75837
Tssr2461 7 142577911 to 142577926 15 + TSS region transcription start site region 2461
Tssr70226 7 142577965 to 142577974 9 + TSS region transcription start site region 70226
Tssr75838 7 142577985 to 142577990 5 - TSS region transcription start site region 75838
Tssr75839 7 142577998 to 142578012 14 - TSS region transcription start site region 75839
Tssr70227 7 142578037 to 142578056 19 + TSS region transcription start site region 70227
Tssr75840 7 142578040 to 142578041 1 - TSS region transcription start site region 75840
Tssr75841 7 142578042 to 142578068 26 - TSS region transcription start site region 75841
Tssr70228 7 142578060 to 142578069 9 + TSS region transcription start site region 70228
Tssr75842 7 142578079 to 142578085 6 - TSS region transcription start site region 75842
Tssr75843 7 142578086 to 142578091 5 - TSS region transcription start site region 75843
Tssr75844 7 142578093 to 142578121 28 - TSS region transcription start site region 75844
Tssr75845 7 142578139 to 142578154 15 - TSS region transcription start site region 75845
Cpgi19965 7 142580312 to 142580596 284 CpG island CpG island 19965
Gm33148 7 142591744 to 142620804 29060 + lincRNA gene predicted gene, 33148
Ihit1 7 142603334 to 142603615 281 unclassified gene Igf2-H-19 interval transcript 1