Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:142126550-142376553

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39115 7 142135336 to 142136034 698 - protein coding gene predicted gene, 39115
Gm45337 7 142143341 to 142144607 1266 - protein coding gene predicted gene 45337
Tssr75736 7 142144605 to 142144609 4 - TSS region transcription start site region 75736
Gm25370 7 142153864 to 142153957 93 + snoRNA gene predicted gene, 25370
Gm29735 7 142156454 to 142157113 659 - protein coding gene predicted gene, 29735
Gm4553 7 142164696 to 142165739 1043 - protein coding gene predicted gene 4553
Tssr75737 7 142165749 to 142165753 4 - TSS region transcription start site region 75737
Krtap5-2 7 142174535 to 142176005 1470 - protein coding gene keratin associated protein 5-2
Tssr75738 7 142176001 to 142176007 6 - TSS region transcription start site region 75738
Gm10153 7 142189427 to 142190389 962 - protein coding gene predicted gene 10153
Tssr75739 7 142190449 to 142190453 4 - TSS region transcription start site region 75739
Tssr70121 7 142201361 to 142201367 6 + TSS region transcription start site region 70121
Krtap5-3 7 142201364 to 142203015 1651 + protein coding gene keratin associated protein 5-3
Tssr70122 7 142211792 to 142211796 4 + TSS region transcription start site region 70122
Gm7579 7 142211859 to 142212590 731 + protein coding gene predicted gene 7579
Tssr70123 7 142222158 to 142222163 5 + TSS region transcription start site region 70123
Gm19094 7 142223521 to 142224763 1242 + pseudogene predicted gene, 19094
Krtap5-5 7 142228795 to 142229971 1176 - protein coding gene keratin associated protein 5-5
Gm40460 7 142240344 to 142241078 734 - protein coding gene predicted gene, 40460
Tssr75740 7 142241135 to 142241140 5 - TSS region transcription start site region 75740
Gm46022 7 142247901 to 142255284 7383 - lncRNA gene predicted gene, 46022
Gm47762 7 142250822 to 142251538 716 - pseudogene predicted gene, 47762
Tssr75741 7 142251550 to 142251553 3 - TSS region transcription start site region 75741
Gm2431 7 142257647 to 142258354 707 - protein coding gene predicted gene 2431
Tssr75742 7 142267794 to 142267802 8 - TSS region transcription start site region 75742
Gm4559 7 142273764 to 142274363 599 - protein coding gene predicted gene 4559
Gm10013 7 142280268 to 142280939 671 - pseudogene predicted gene 10013
Tssr70124 7 142283208 to 142283213 5 + TSS region transcription start site region 70124
Gm45889 7 142283210 to 142290418 7208 + lincRNA gene predicted gene 45889
Tssr70125 7 142283224 to 142283241 17 + TSS region transcription start site region 70125
Tssr70126 7 142283254 to 142283265 11 + TSS region transcription start site region 70126
B130016D09Rik 7 142283463 to 142289754 6291 + unclassified gene RIKEN cDNA B130016D09 cDNA
Cpgi19958 7 142283991 to 142284717 726 CpG island CpG island 19958
Krtap5-1 7 142296377 to 142297069 692 - protein coding gene keratin associated protein 5-1
Krtap5-4 7 142303502 to 142304503 1001 + protein coding gene keratin associated protein 5-4
Tssr70127 7 142303528 to 142303536 8 + TSS region transcription start site region 70127
Gm5054 7 142305842 to 142306294 452 - pseudogene predicted gene 5054
Ifitm10 7 142325837 to 142373753 47916 - protein coding gene interferon induced transmembrane protein 10
D7Jor1 7 142328587 to 142328865 278 DNA segment DNA segment, Chr 7, Barbara Jordan 1
Tssr75743 7 142342025 to 142342030 5 - TSS region transcription start site region 75743
D7Mit14 7 142365918 to 142366067 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 14
Eae4 7 142366067 to 19413473 -122952594 QTL experimental allergic encephalomyelitis susceptibility 4
Cpgi19959 7 142370960 to 142371204 244 CpG island CpG island 19959
Gm49369 7 142371096 to 142382667 11571 - protein coding gene predicted gene, 49369
Tssr75744 7 142371101 to 142371110 9 - TSS region transcription start site region 75744
Cpgi19960 7 142371521 to 142372836 1315 CpG island CpG island 19960
Tssr75745 7 142372210 to 142372292 82 - TSS region transcription start site region 75745
Tssr75746 7 142372321 to 142372336 15 - TSS region transcription start site region 75746
Tssr75747 7 142372342 to 142372371 29 - TSS region transcription start site region 75747
Tssr75748 7 142372741 to 142372775 34 - TSS region transcription start site region 75748
Tssr75749 7 142373733 to 142373771 38 - TSS region transcription start site region 75749
Tssr70128 7 142375911 to 142375924 13 + TSS region transcription start site region 70128
Ctsd 7 142375916 to 142387870 11954 - protein coding gene cathepsin D
Tssr75750 7 142375992 to 142375999 7 - TSS region transcription start site region 75750
Tssr75751 7 142376059 to 142376064 5 - TSS region transcription start site region 75751
Tssr75752 7 142376069 to 142376080 11 - TSS region transcription start site region 75752
Tssr70129 7 142376317 to 142376358 41 + TSS region transcription start site region 70129
Tssr75753 7 142376344 to 142376355 11 - TSS region transcription start site region 75753
Tssr75754 7 142376384 to 142376391 7 - TSS region transcription start site region 75754
Tssr70130 7 142376434 to 142376452 18 + TSS region transcription start site region 70130
Tssr75755 7 142376495 to 142376518 23 - TSS region transcription start site region 75755