Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:141327587-141547650

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144 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Deaf1 7 141297180 to 141327690 30510 - protein coding gene DEAF1, transcription factor
Cpgi19932 7 141326626 to 141328726 2100 CpG island CpG island 19932
Tssr75632 7 141327557 to 141327607 50 - TSS region transcription start site region 75632
Tssr75633 7 141327649 to 141327661 12 - TSS region transcription start site region 75633
Tssr75634 7 141327675 to 141327694 19 - TSS region transcription start site region 75634
Tssr75635 7 141327700 to 141327737 37 - TSS region transcription start site region 75635
Tssr75636 7 141327738 to 141327749 11 - TSS region transcription start site region 75636
Tmem80 7 141327743 to 141337156 9413 + protein coding gene transmembrane protein 80
Tssr69944 7 141327840 to 141327882 42 + TSS region transcription start site region 69944
Tssr69945 7 141328122 to 141328139 17 + TSS region transcription start site region 69945
Tssr69946 7 141328142 to 141328179 37 + TSS region transcription start site region 69946
Tssr75637 7 141328181 to 141328209 28 - TSS region transcription start site region 75637
Tssr69947 7 141328205 to 141328241 36 + TSS region transcription start site region 69947
Tssr69948 7 141329307 to 141329312 5 + TSS region transcription start site region 69948
Cpgi19933 7 141338784 to 141339438 654 CpG island CpG island 19933
Eps8l2 7 141338911 to 141363020 24109 + protein coding gene EPS8-like 2
Tssr69949 7 141338939 to 141338950 11 + TSS region transcription start site region 69949
Tssr69950 7 141338963 to 141339013 50 + TSS region transcription start site region 69950
Tssr69951 7 141342057 to 141342074 17 + TSS region transcription start site region 69951
Tssr69952 7 141356115 to 141356129 14 + TSS region transcription start site region 69952
Tssr69953 7 141356142 to 141356154 12 + TSS region transcription start site region 69953
B230206H07Rik 7 141359178 to 141365110 5932 - lncRNA gene RIKEN cDNA B230206H07 gene
Tssr69954 7 141360208 to 141360230 22 + TSS region transcription start site region 69954
Tssr69955 7 141360236 to 141360247 11 + TSS region transcription start site region 69955
Cpgi19934 7 141361488 to 141361875 387 CpG island CpG island 19934
Tssr75638 7 141365080 to 141365111 31 - TSS region transcription start site region 75638
Tssr75639 7 141365174 to 141365190 16 - TSS region transcription start site region 75639
Gm25725 7 141386495 to 141386624 129 - snoRNA gene predicted gene, 25725
Cpgi19935 7 141391724 to 141392513 789 CpG island CpG island 19935
Tssr69956 7 141392164 to 141392213 49 + TSS region transcription start site region 69956
Taldo1 7 141392199 to 141402968 10769 + protein coding gene transaldolase 1
Tssr69957 7 141392216 to 141392227 11 + TSS region transcription start site region 69957
Tssr69958 7 141393183 to 141393186 3 + TSS region transcription start site region 69958
Tssr69959 7 141395589 to 141395602 13 + TSS region transcription start site region 69959
Tssr69960 7 141401868 to 141401882 14 + TSS region transcription start site region 69960
Gm4535 7 141406637 to 141407194 557 + pseudogene predicted gene 4535
Gatd1 7 141408184 to 141414125 5941 - protein coding gene glutamine amidotransferase like class 1 domain containing 1
Tssr75640 7 141408540 to 141408544 4 - TSS region transcription start site region 75640
Cpgi19936 7 141413599 to 141414732 1133 CpG island CpG island 19936
Tssr75641 7 141414054 to 141414104 50 - TSS region transcription start site region 75641
Tssr75642 7 141414115 to 141414130 15 - TSS region transcription start site region 75642
Cend1 7 141426446 to 141429491 3045 - protein coding gene cell cycle exit and neuronal differentiation 1
Tssr75643 7 141427368 to 141427390 22 - TSS region transcription start site region 75643
Tssr75644 7 141427420 to 141427440 20 - TSS region transcription start site region 75644
Tssr75645 7 141427501 to 141427521 20 - TSS region transcription start site region 75645
Tssr75646 7 141427999 to 141428008 9 - TSS region transcription start site region 75646
Cpgi19937 7 141429155 to 141429540 385 CpG island CpG island 19937
Tssr75647 7 141429354 to 141429429 75 - TSS region transcription start site region 75647
Tssr75648 7 141429433 to 141429455 22 - TSS region transcription start site region 75648
Tssr75649 7 141429558 to 141429565 7 - TSS region transcription start site region 75649
Slc25a22 7 141429749 to 141437874 8125 - protein coding gene solute carrier family 25 (mitochondrial carrier, glutamate), member 22
Tssr75650 7 141434229 to 141434240 11 - TSS region transcription start site region 75650
Tssr75651 7 141434279 to 141434299 20 - TSS region transcription start site region 75651
Tssr75652 7 141434470 to 141434486 16 - TSS region transcription start site region 75652
Tssr75653 7 141434532 to 141434605 73 - TSS region transcription start site region 75653
Tssr75654 7 141435327 to 141435375 48 - TSS region transcription start site region 75654
Cpgi19938 7 141437015 to 141437825 810 CpG island CpG island 19938
Tssr75655 7 141437587 to 141437650 63 - TSS region transcription start site region 75655
Tssr75656 7 141437796 to 141437805 9 - TSS region transcription start site region 75656
Tssr75657 7 141437829 to 141437853 24 - TSS region transcription start site region 75657
Pidd1 7 141438113 to 141444025 5912 - protein coding gene p53 induced death domain protein 1
Tssr75658 7 141443314 to 141443359 45 - TSS region transcription start site region 75658
Cpgi19939 7 141443762 to 141444082 320 CpG island CpG island 19939
Tssr75659 7 141443989 to 141444016 27 - TSS region transcription start site region 75659
Cpgi19940 7 141447198 to 141448150 952 CpG island CpG island 19940
Rplp2 7 141447464 to 141451350 3886 + protein coding gene ribosomal protein, large P2
Tssr69961 7 141447645 to 141447655 10 + TSS region transcription start site region 69961
Tssr69962 7 141447815 to 141447836 21 + TSS region transcription start site region 69962
Tssr69963 7 141447859 to 141447903 44 + TSS region transcription start site region 69963
Tssr69964 7 141448800 to 141448808 8 + TSS region transcription start site region 69964
Snora52 7 141448803 to 141448936 133 + snoRNA gene small nucleolar RNA, H/ACA box 52
Cpgi19941 7 141455000 to 141455944 944 CpG island CpG island 19941
Tssr75660 7 141455068 to 141455079 11 - TSS region transcription start site region 75660
Pnpla2 7 141455198 to 141460743 5545 + protein coding gene patatin-like phospholipase domain containing 2
Tssr69965 7 141455199 to 141455214 15 + TSS region transcription start site region 69965
Tssr75661 7 141455370 to 141455380 10 - TSS region transcription start site region 75661
Tssr75662 7 141455833 to 141455853 20 - TSS region transcription start site region 75662
Tssr69966 7 141457002 to 141457009 7 + TSS region transcription start site region 69966
Tssr69967 7 141457018 to 141457021 3 + TSS region transcription start site region 69967
Tssr69968 7 141457032 to 141457066 34 + TSS region transcription start site region 69968
Tssr69969 7 141457585 to 141457634 49 + TSS region transcription start site region 69969
Tssr69970 7 141457998 to 141458009 11 + TSS region transcription start site region 69970
Tssr69971 7 141458081 to 141458098 17 + TSS region transcription start site region 69971
Tssr69972 7 141458852 to 141458862 10 + TSS region transcription start site region 69972
Tssr75663 7 141458915 to 141458927 12 - TSS region transcription start site region 75663
Tssr69973 7 141459216 to 141459230 14 + TSS region transcription start site region 69973
Tssr69974 7 141459400 to 141459409 9 + TSS region transcription start site region 69974
Cpgi19942 7 141459479 to 141459666 187 CpG island CpG island 19942
Tssr69975 7 141459497 to 141459510 13 + TSS region transcription start site region 69975
Tssr69976 7 141459517 to 141459529 12 + TSS region transcription start site region 69976
Tssr69977 7 141459610 to 141459626 16 + TSS region transcription start site region 69977
Tssr69978 7 141459641 to 141459664 23 + TSS region transcription start site region 69978
Tssr69979 7 141459686 to 141459695 9 + TSS region transcription start site region 69979
Tssr69980 7 141459888 to 141459920 32 + TSS region transcription start site region 69980
Tssr69981 7 141460922 to 141460951 29 + TSS region transcription start site region 69981
Tssr69982 7 141460984 to 141461008 24 + TSS region transcription start site region 69982
Tssr69983 7 141461075 to 141461101 26 + TSS region transcription start site region 69983
Cracr2b 7 141461094 to 141466613 5519 + protein coding gene calcium release activated channel regulator 2B
Tssr69984 7 141461105 to 141461137 32 + TSS region transcription start site region 69984
Cpgi19943 7 141461284 to 141462378 1094 CpG island CpG island 19943
Gm10575 7 141461481 to 141467771 6290 - unclassified non-coding RNA gene predicted gene 10575
Tssr69985 7 141461728 to 141461757 29 + TSS region transcription start site region 69985
Tssr69986 7 141462721 to 141462723 2 + TSS region transcription start site region 69986
Tssr69987 7 141464029 to 141464089 60 + TSS region transcription start site region 69987
Tssr69988 7 141464093 to 141464113 20 + TSS region transcription start site region 69988
Cpgi19944 7 141464488 to 141465361 873 CpG island CpG island 19944
Tssr69989 7 141465099 to 141465133 34 + TSS region transcription start site region 69989
Cpgi19945 7 141467145 to 141467921 776 CpG island CpG island 19945
Tssr69990 7 141467386 to 141467427 41 + TSS region transcription start site region 69990
Cd151 7 141467392 to 141471473 4081 + protein coding gene CD151 antigen
Tssr69991 7 141467503 to 141467541 38 + TSS region transcription start site region 69991
Tssr69992 7 141468332 to 141468393 61 + TSS region transcription start site region 69992
Tssr75664 7 141468658 to 141468677 19 - TSS region transcription start site region 75664
Tssr69993 7 141468776 to 141468807 31 + TSS region transcription start site region 69993
Tssr69994 7 141468809 to 141468845 36 + TSS region transcription start site region 69994
Tssr69995 7 141469171 to 141469212 41 + TSS region transcription start site region 69995
Tssr69996 7 141470372 to 141470392 20 + TSS region transcription start site region 69996
Tssr69997 7 141470595 to 141470622 27 + TSS region transcription start site region 69997
Polr2l 7 141471860 to 141475132 3272 - protein coding gene polymerase (RNA) II (DNA directed) polypeptide L
Cpgi19946 7 141474830 to 141476329 1499 CpG island CpG island 19946
Tssr75665 7 141475131 to 141475168 37 - TSS region transcription start site region 75665
Tssr69998 7 141475224 to 141475231 7 + TSS region transcription start site region 69998
Tspan4 7 141475240 to 141493427 18187 + protein coding gene tetraspanin 4
Tssr69999 7 141475245 to 141475256 11 + TSS region transcription start site region 69999
Tssr70000 7 141475266 to 141475292 26 + TSS region transcription start site region 70000
Tssr70001 7 141475304 to 141475315 11 + TSS region transcription start site region 70001
Tssr75666 7 141475328 to 141475367 39 - TSS region transcription start site region 75666
Tssr70002 7 141475440 to 141475455 15 + TSS region transcription start site region 70002
Tssr70003 7 141475459 to 141475462 3 + TSS region transcription start site region 70003
Tssr75667 7 141476247 to 141476267 20 - TSS region transcription start site region 75667
Cpgi19947 7 141476332 to 141476728 396 CpG island CpG island 19947
Tssr70004 7 141476374 to 141476388 14 + TSS region transcription start site region 70004
Tssr70005 7 141476392 to 141476402 10 + TSS region transcription start site region 70005
Tssr70006 7 141476404 to 141476407 3 + TSS region transcription start site region 70006
Tssr70007 7 141476413 to 141476455 42 + TSS region transcription start site region 70007
Cpgi19948 7 141481537 to 141482898 1361 CpG island CpG island 19948
Tssr70008 7 141482028 to 141482086 58 + TSS region transcription start site region 70008
Tssr70009 7 141482096 to 141482118 22 + TSS region transcription start site region 70009
Chid1 7 141493136 to 141539857 46721 - protein coding gene chitinase domain containing 1
Gm45416 7 141516403 to 141518603 2200 - unclassified gene predicted gene 45416
Cpgi19949 7 141539390 to 141540281 891 CpG island CpG island 19949
Tssr70010 7 141539770 to 141539795 25 + TSS region transcription start site region 70010
Tssr75668 7 141539784 to 141539845 61 - TSS region transcription start site region 75668
Tssr70011 7 141540001 to 141540014 13 + TSS region transcription start site region 70011