Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:141248784-141429438

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91 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Phrf1 7 141228784 to 141262750 33966 + protein coding gene PHD and ring finger domains 1
Tssr69940 7 141259740 to 141259766 26 + TSS region transcription start site region 69940
Tssr69941 7 141263183 to 141263198 15 + TSS region transcription start site region 69941
Irf7 7 141263183 to 141266499 3316 - protein coding gene interferon regulatory factor 7
Tssr75604 7 141263525 to 141263570 45 - TSS region transcription start site region 75604
Tssr75605 7 141263683 to 141263764 81 - TSS region transcription start site region 75605
Tssr75606 7 141263821 to 141263842 21 - TSS region transcription start site region 75606
Tssr75607 7 141263897 to 141263917 20 - TSS region transcription start site region 75607
Tssr75608 7 141263954 to 141263971 17 - TSS region transcription start site region 75608
Tssr75609 7 141263972 to 141263989 17 - TSS region transcription start site region 75609
Tssr75610 7 141263997 to 141264010 13 - TSS region transcription start site region 75610
Tssr75611 7 141264253 to 141264274 21 - TSS region transcription start site region 75611
Tssr75612 7 141264515 to 141264526 11 - TSS region transcription start site region 75612
Tssr75613 7 141265243 to 141265258 15 - TSS region transcription start site region 75613
Tssr69942 7 141265412 to 141265428 16 + TSS region transcription start site region 69942
Tssr75614 7 141265453 to 141265479 26 - TSS region transcription start site region 75614
Tssr75615 7 141265719 to 141265739 20 - TSS region transcription start site region 75615
Tssr75616 7 141265857 to 141265881 24 - TSS region transcription start site region 75616
Tssr75617 7 141265928 to 141265941 13 - TSS region transcription start site region 75617
Tssr75618 7 141265960 to 141265993 33 - TSS region transcription start site region 75618
Cpgi19927 7 141265981 to 141266415 434 CpG island CpG island 19927
Tssr75619 7 141266018 to 141266030 12 - TSS region transcription start site region 75619
Tssr75620 7 141266415 to 141266430 15 - TSS region transcription start site region 75620
Cpgi19928 7 141268985 to 141269417 432 CpG island CpG island 19928
Cdhr5 7 141269083 to 141276786 7703 - protein coding gene cadherin-related family member 5
Tssr75621 7 141269451 to 141269475 24 - TSS region transcription start site region 75621
Tssr75622 7 141269946 to 141269957 11 - TSS region transcription start site region 75622
Tssr75623 7 141271726 to 141271738 12 - TSS region transcription start site region 75623
Tssr75624 7 141271756 to 141271768 12 - TSS region transcription start site region 75624
Tssr75625 7 141271810 to 141271821 11 - TSS region transcription start site region 75625
Tssr75626 7 141273091 to 141273117 26 - TSS region transcription start site region 75626
Tssr75627 7 141274021 to 141274033 12 - TSS region transcription start site region 75627
Tssr75628 7 141276729 to 141276791 62 - TSS region transcription start site region 75628
Sct 7 141278330 to 141279133 803 - protein coding gene secretin
Cpgi19929 7 141278824 to 141279491 667 CpG island CpG island 19929
Tssr75629 7 141279121 to 141279139 18 - TSS region transcription start site region 75629
Cpgi19930 7 141291951 to 141292683 732 CpG island CpG island 19930
Drd4 7 141291974 to 141296238 4264 + protein coding gene dopamine receptor D4
Tssr69943 7 141291988 to 141292033 45 + TSS region transcription start site region 69943
Cpgi19931 7 141293561 to 141294931 1370 CpG island CpG island 19931
Deaf1 7 141297180 to 141327690 30510 - protein coding gene DEAF1, transcription factor
Tssr75630 7 141322029 to 141322043 14 - TSS region transcription start site region 75630
Cpgi19932 7 141326626 to 141328726 2100 CpG island CpG island 19932
Tssr75631 7 141327510 to 141327556 46 - TSS region transcription start site region 75631
Tssr75632 7 141327557 to 141327607 50 - TSS region transcription start site region 75632
Tssr75633 7 141327649 to 141327661 12 - TSS region transcription start site region 75633
Tssr75634 7 141327675 to 141327694 19 - TSS region transcription start site region 75634
Tssr75635 7 141327700 to 141327737 37 - TSS region transcription start site region 75635
Tssr75636 7 141327738 to 141327749 11 - TSS region transcription start site region 75636
Tmem80 7 141327743 to 141337156 9413 + protein coding gene transmembrane protein 80
Tssr69944 7 141327840 to 141327882 42 + TSS region transcription start site region 69944
Tssr69945 7 141328122 to 141328139 17 + TSS region transcription start site region 69945
Tssr69946 7 141328142 to 141328179 37 + TSS region transcription start site region 69946
Tssr75637 7 141328181 to 141328209 28 - TSS region transcription start site region 75637
Tssr69947 7 141328205 to 141328241 36 + TSS region transcription start site region 69947
Tssr69948 7 141329307 to 141329312 5 + TSS region transcription start site region 69948
Cpgi19933 7 141338784 to 141339438 654 CpG island CpG island 19933
Eps8l2 7 141338911 to 141363020 24109 + protein coding gene EPS8-like 2
Tssr69949 7 141338939 to 141338950 11 + TSS region transcription start site region 69949
Tssr69950 7 141338963 to 141339013 50 + TSS region transcription start site region 69950
Tssr69951 7 141342057 to 141342074 17 + TSS region transcription start site region 69951
Tssr69952 7 141356115 to 141356129 14 + TSS region transcription start site region 69952
Tssr69953 7 141356142 to 141356154 12 + TSS region transcription start site region 69953
B230206H07Rik 7 141359178 to 141365110 5932 - lncRNA gene RIKEN cDNA B230206H07 gene
Tssr69954 7 141360208 to 141360230 22 + TSS region transcription start site region 69954
Tssr69955 7 141360236 to 141360247 11 + TSS region transcription start site region 69955
Cpgi19934 7 141361488 to 141361875 387 CpG island CpG island 19934
Tssr75638 7 141365080 to 141365111 31 - TSS region transcription start site region 75638
Tssr75639 7 141365174 to 141365190 16 - TSS region transcription start site region 75639
Gm25725 7 141386495 to 141386624 129 - snoRNA gene predicted gene, 25725
Cpgi19935 7 141391724 to 141392513 789 CpG island CpG island 19935
Tssr69956 7 141392164 to 141392213 49 + TSS region transcription start site region 69956
Taldo1 7 141392199 to 141402968 10769 + protein coding gene transaldolase 1
Tssr69957 7 141392216 to 141392227 11 + TSS region transcription start site region 69957
Tssr69958 7 141393183 to 141393186 3 + TSS region transcription start site region 69958
Tssr69959 7 141395589 to 141395602 13 + TSS region transcription start site region 69959
Tssr69960 7 141401868 to 141401882 14 + TSS region transcription start site region 69960
Gm4535 7 141406637 to 141407194 557 + pseudogene predicted gene 4535
Gatd1 7 141408184 to 141414125 5941 - protein coding gene glutamine amidotransferase like class 1 domain containing 1
Tssr75640 7 141408540 to 141408544 4 - TSS region transcription start site region 75640
Cpgi19936 7 141413599 to 141414732 1133 CpG island CpG island 19936
Tssr75641 7 141414054 to 141414104 50 - TSS region transcription start site region 75641
Tssr75642 7 141414115 to 141414130 15 - TSS region transcription start site region 75642
Cend1 7 141426446 to 141429491 3045 - protein coding gene cell cycle exit and neuronal differentiation 1
Tssr75643 7 141427368 to 141427390 22 - TSS region transcription start site region 75643
Tssr75644 7 141427420 to 141427440 20 - TSS region transcription start site region 75644
Tssr75645 7 141427501 to 141427521 20 - TSS region transcription start site region 75645
Tssr75646 7 141427999 to 141428008 9 - TSS region transcription start site region 75646
Cpgi19937 7 141429155 to 141429540 385 CpG island CpG island 19937
Tssr75647 7 141429354 to 141429429 75 - TSS region transcription start site region 75647
Tssr75648 7 141429433 to 141429455 22 - TSS region transcription start site region 75648