Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:141143263-141314466

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91 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ptdss2 7 141131286 to 141156158 24872 + protein coding gene phosphatidylserine synthase 2
Tssr69921 7 141145127 to 141145130 3 + TSS region transcription start site region 69921
Tssr69922 7 141148951 to 141148977 26 + TSS region transcription start site region 69922
Rnh1 7 141160326 to 141172851 12525 - protein coding gene ribonuclease/angiogenin inhibitor 1
Tssr69923 7 141165954 to 141165961 7 + TSS region transcription start site region 69923
Tssr75589 7 141167870 to 141167909 39 - TSS region transcription start site region 75589
Tssr69924 7 141167995 to 141168015 20 + TSS region transcription start site region 69924
Cpgi19921 7 141168411 to 141168851 440 CpG island CpG island 19921
Tssr75590 7 141168657 to 141168666 9 - TSS region transcription start site region 75590
Tssr75591 7 141168671 to 141168811 140 - TSS region transcription start site region 75591
Tssr75592 7 141171160 to 141171181 21 - TSS region transcription start site region 75592
Cpgi19922 7 141172147 to 141173062 915 CpG island CpG island 19922
Tssr69925 7 141172600 to 141172644 44 + TSS region transcription start site region 69925
Tssr69926 7 141172666 to 141172677 11 + TSS region transcription start site region 69926
Tssr75593 7 141172788 to 141172803 15 - TSS region transcription start site region 75593
Tssr75594 7 141172809 to 141172862 53 - TSS region transcription start site region 75594
Tssr69927 7 141172914 to 141172957 43 + TSS region transcription start site region 69927
9430063H18Rik 7 141172934 to 141174079 1145 unclassified gene RIKEN cDNA 9430063H18 gene
Gm5905 7 141177885 to 141178464 579 - pseudogene predicted gene 5905
Tssr75595 7 141178507 to 141178518 11 - TSS region transcription start site region 75595
Gm22019 7 141181216 to 141181311 95 - snRNA gene predicted gene, 22019
Tssr75596 7 141183377 to 141183397 20 - TSS region transcription start site region 75596
Tssr75597 7 141183421 to 141183428 7 - TSS region transcription start site region 75597
Hras 7 141189934 to 141194004 4070 - protein coding gene Harvey rat sarcoma virus oncogene
Cpgi19923 7 141192923 to 141195277 2354 CpG island CpG island 19923
Tssr75598 7 141193934 to 141194012 78 - TSS region transcription start site region 75598
Tssr69928 7 141194107 to 141194118 11 + TSS region transcription start site region 69928
Tssr69929 7 141194122 to 141194140 18 + TSS region transcription start site region 69929
Tssr69930 7 141194148 to 141194191 43 + TSS region transcription start site region 69930
Lrrc56 7 141194157 to 141210055 15898 + protein coding gene leucine rich repeat containing 56
Tssr69931 7 141195047 to 141195083 36 + TSS region transcription start site region 69931
Tssr69932 7 141195131 to 141195146 15 + TSS region transcription start site region 69932
Tssr69933 7 141196850 to 141196858 8 + TSS region transcription start site region 69933
Lmntd2 7 141209992 to 141214080 4088 - protein coding gene lamin tail domain containing 2
Tssr75599 7 141214455 to 141214476 21 - TSS region transcription start site region 75599
Cpgi19924 7 141215372 to 141216404 1032 CpG island CpG island 19924
Tssr75600 7 141215640 to 141215661 21 - TSS region transcription start site region 75600
Tssr75601 7 141215671 to 141215705 34 - TSS region transcription start site region 75601
Tssr69934 7 141215852 to 141215967 115 + TSS region transcription start site region 69934
Rassf7 7 141215860 to 141218658 2798 + protein coding gene Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
Tssr69935 7 141216183 to 141216198 15 + TSS region transcription start site region 69935
Tssr69936 7 141216626 to 141216644 18 + TSS region transcription start site region 69936
Tssr69937 7 141216646 to 141216660 14 + TSS region transcription start site region 69937
Cpgi19925 7 141221367 to 141222336 969 CpG island CpG island 19925
Mir210 7 141221384 to 141221493 109 - miRNA gene microRNA 210
Tssr75602 7 141221706 to 141221728 22 - TSS region transcription start site region 75602
Cpgi19926 7 141228263 to 141229466 1203 CpG island CpG island 19926
Tssr69938 7 141228766 to 141228813 47 + TSS region transcription start site region 69938
Phrf1 7 141228784 to 141262750 33966 + protein coding gene PHD and ring finger domains 1
Tssr69939 7 141228818 to 141228834 16 + TSS region transcription start site region 69939
Tssr75603 7 141231493 to 141231499 6 - TSS region transcription start site region 75603
Tssr69940 7 141259740 to 141259766 26 + TSS region transcription start site region 69940
Tssr69941 7 141263183 to 141263198 15 + TSS region transcription start site region 69941
Irf7 7 141263183 to 141266499 3316 - protein coding gene interferon regulatory factor 7
Tssr75604 7 141263525 to 141263570 45 - TSS region transcription start site region 75604
Tssr75605 7 141263683 to 141263764 81 - TSS region transcription start site region 75605
Tssr75606 7 141263821 to 141263842 21 - TSS region transcription start site region 75606
Tssr75607 7 141263897 to 141263917 20 - TSS region transcription start site region 75607
Tssr75608 7 141263954 to 141263971 17 - TSS region transcription start site region 75608
Tssr75609 7 141263972 to 141263989 17 - TSS region transcription start site region 75609
Tssr75610 7 141263997 to 141264010 13 - TSS region transcription start site region 75610
Tssr75611 7 141264253 to 141264274 21 - TSS region transcription start site region 75611
Tssr75612 7 141264515 to 141264526 11 - TSS region transcription start site region 75612
Tssr75613 7 141265243 to 141265258 15 - TSS region transcription start site region 75613
Tssr69942 7 141265412 to 141265428 16 + TSS region transcription start site region 69942
Tssr75614 7 141265453 to 141265479 26 - TSS region transcription start site region 75614
Tssr75615 7 141265719 to 141265739 20 - TSS region transcription start site region 75615
Tssr75616 7 141265857 to 141265881 24 - TSS region transcription start site region 75616
Tssr75617 7 141265928 to 141265941 13 - TSS region transcription start site region 75617
Tssr75618 7 141265960 to 141265993 33 - TSS region transcription start site region 75618
Cpgi19927 7 141265981 to 141266415 434 CpG island CpG island 19927
Tssr75619 7 141266018 to 141266030 12 - TSS region transcription start site region 75619
Tssr75620 7 141266415 to 141266430 15 - TSS region transcription start site region 75620
Cpgi19928 7 141268985 to 141269417 432 CpG island CpG island 19928
Cdhr5 7 141269083 to 141276786 7703 - protein coding gene cadherin-related family member 5
Tssr75621 7 141269451 to 141269475 24 - TSS region transcription start site region 75621
Tssr75622 7 141269946 to 141269957 11 - TSS region transcription start site region 75622
Tssr75623 7 141271726 to 141271738 12 - TSS region transcription start site region 75623
Tssr75624 7 141271756 to 141271768 12 - TSS region transcription start site region 75624
Tssr75625 7 141271810 to 141271821 11 - TSS region transcription start site region 75625
Tssr75626 7 141273091 to 141273117 26 - TSS region transcription start site region 75626
Tssr75627 7 141274021 to 141274033 12 - TSS region transcription start site region 75627
Tssr75628 7 141276729 to 141276791 62 - TSS region transcription start site region 75628
Sct 7 141278330 to 141279133 803 - protein coding gene secretin
Cpgi19929 7 141278824 to 141279491 667 CpG island CpG island 19929
Tssr75629 7 141279121 to 141279139 18 - TSS region transcription start site region 75629
Cpgi19930 7 141291951 to 141292683 732 CpG island CpG island 19930
Drd4 7 141291974 to 141296238 4264 + protein coding gene dopamine receptor D4
Tssr69943 7 141291988 to 141292033 45 + TSS region transcription start site region 69943
Cpgi19931 7 141293561 to 141294931 1370 CpG island CpG island 19931
Deaf1 7 141297180 to 141327690 30510 - protein coding gene DEAF1, transcription factor