Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 7:141041175-141150572

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61 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr69899 7 141047992 to 141048002 10 + TSS region transcription start site region 69899
Tssr69900 7 141048015 to 141048034 19 + TSS region transcription start site region 69900
Gm45299 7 141051589 to 141053022 1433 + pseudogene predicted gene 45299
Tssr69901 7 141051646 to 141051676 30 + TSS region transcription start site region 69901
Gm39114 7 141058452 to 141061039 2587 - lncRNA gene predicted gene, 39114
Cpgi19911 7 141060360 to 141061872 1512 CpG island CpG island 19911
Tssr75573 7 141060843 to 141060867 24 - TSS region transcription start site region 75573
Tssr69902 7 141060962 to 141061046 84 + TSS region transcription start site region 69902
Tssr69903 7 141061097 to 141061109 12 + TSS region transcription start site region 69903
B4galnt4 7 141061104 to 141072400 11296 + protein coding gene beta-1,4-N-acetyl-galactosaminyl transferase 4
Tssr69904 7 141061303 to 141061311 8 + TSS region transcription start site region 69904
Tssr69905 7 141061315 to 141061330 15 + TSS region transcription start site region 69905
Tssr75574 7 141063045 to 141063046 1 - TSS region transcription start site region 75574
Cpgi19912 7 141068479 to 141068774 295 CpG island CpG island 19912
Cpgi19913 7 141070200 to 141071091 891 CpG island CpG island 19913
Cpgi19914 7 141071960 to 141072318 358 CpG island CpG island 19914
D10Bwg0134e 7 141072157 to 141072330 173 DNA segment DNA segment, Chr 10, Brigham & Women's Genetics 0134 expressed
Tssr75575 7 141072183 to 141072196 13 - TSS region transcription start site region 75575
Tssr69906 7 141078126 to 141078137 11 + TSS region transcription start site region 69906
Tssr69907 7 141078170 to 141078181 11 + TSS region transcription start site region 69907
Tssr69908 7 141078188 to 141078207 19 + TSS region transcription start site region 69908
Pkp3 7 141078229 to 141090511 12282 + protein coding gene plakophilin 3
Tssr69909 7 141078266 to 141078314 48 + TSS region transcription start site region 69909
Tssr69910 7 141079125 to 141079167 42 + TSS region transcription start site region 69910
Tssr69911 7 141079746 to 141079755 9 + TSS region transcription start site region 69911
Tssr69912 7 141079759 to 141079781 22 + TSS region transcription start site region 69912
Tssr69913 7 141079784 to 141079806 22 + TSS region transcription start site region 69913
Tssr69914 7 141079848 to 141079859 11 + TSS region transcription start site region 69914
Cpgi19915 7 141079954 to 141080124 170 CpG island CpG island 19915
Tssr69915 7 141088121 to 141088184 63 + TSS region transcription start site region 69915
Cpgi19916 7 141088411 to 141088985 574 CpG island CpG island 19916
Tssr75576 7 141090369 to 141090408 39 - TSS region transcription start site region 75576
Sigirr 7 141091175 to 141100572 9397 - protein coding gene single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
Cpgi19917 7 141092091 to 141092715 624 CpG island CpG island 19917
Tssr75577 7 141094082 to 141094094 12 - TSS region transcription start site region 75577
Tssr75578 7 141094873 to 141094884 11 - TSS region transcription start site region 75578
Tssr75579 7 141094888 to 141094949 61 - TSS region transcription start site region 75579
Tssr75580 7 141094961 to 141094983 22 - TSS region transcription start site region 75580
Tssr75581 7 141096683 to 141096696 13 - TSS region transcription start site region 75581
Tssr75582 7 141096711 to 141096768 57 - TSS region transcription start site region 75582
Tssr75583 7 141096776 to 141096789 13 - TSS region transcription start site region 75583
Tssr75584 7 141096832 to 141096846 14 - TSS region transcription start site region 75584
Cpgi19918 7 141099665 to 141100756 1091 CpG island CpG island 19918
Tssr75585 7 141100526 to 141100551 25 - TSS region transcription start site region 75585
Tssr75586 7 141100555 to 141100587 32 - TSS region transcription start site region 75586
Ano9 7 141101212 to 141117806 16594 - protein coding gene anoctamin 9
Gm24962 7 141105929 to 141106037 108 - snRNA gene predicted gene, 24962
Tssr75587 7 141117772 to 141117797 25 - TSS region transcription start site region 75587
Tssr75588 7 141117804 to 141117825 21 - TSS region transcription start site region 75588
Cpgi19919 7 141122953 to 141123755 802 CpG island CpG island 19919
Gm33560 7 141123231 to 141126228 2997 + lncRNA gene predicted gene, 33560
Cpgi19920 7 141131048 to 141131804 756 CpG island CpG island 19920
Ptdss2 7 141131267 to 141156158 24891 + protein coding gene phosphatidylserine synthase 2
Tssr69916 7 141131268 to 141131333 65 + TSS region transcription start site region 69916
Tssr69917 7 141131341 to 141131378 37 + TSS region transcription start site region 69917
Tssr69918 7 141132433 to 141132450 17 + TSS region transcription start site region 69918
Tssr69919 7 141132458 to 141132476 18 + TSS region transcription start site region 69919
Tssr69920 7 141132478 to 141132501 23 + TSS region transcription start site region 69920
D7Ertd193e 7 141137774 to 141137981 207 DNA segment DNA segment, Chr 7, ERATO Doi 193, expressed
Tssr69921 7 141145127 to 141145130 3 + TSS region transcription start site region 69921
Tssr69922 7 141148951 to 141148977 26 + TSS region transcription start site region 69922