Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:141027772-141207797

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92 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm17387 7 141029131 to 141029620 489 + protein coding gene predicted gene, 17387
Tssr69899 7 141047992 to 141048002 10 + TSS region transcription start site region 69899
Tssr69900 7 141048015 to 141048034 19 + TSS region transcription start site region 69900
Gm45299 7 141051589 to 141053022 1433 + pseudogene predicted gene 45299
Tssr69901 7 141051646 to 141051676 30 + TSS region transcription start site region 69901
Gm39114 7 141058452 to 141060964 2512 - lncRNA gene predicted gene, 39114
Cpgi19911 7 141060360 to 141061872 1512 CpG island CpG island 19911
Tssr75573 7 141060843 to 141060867 24 - TSS region transcription start site region 75573
Tssr69902 7 141060962 to 141061046 84 + TSS region transcription start site region 69902
Tssr69903 7 141061097 to 141061109 12 + TSS region transcription start site region 69903
B4galnt4 7 141061274 to 141072119 10845 + protein coding gene beta-1,4-N-acetyl-galactosaminyl transferase 4
Tssr69904 7 141061303 to 141061311 8 + TSS region transcription start site region 69904
Tssr69905 7 141061315 to 141061330 15 + TSS region transcription start site region 69905
Tssr75574 7 141063045 to 141063046 1 - TSS region transcription start site region 75574
Cpgi19912 7 141068479 to 141068774 295 CpG island CpG island 19912
Cpgi19913 7 141070200 to 141071091 891 CpG island CpG island 19913
Cpgi19914 7 141071960 to 141072318 358 CpG island CpG island 19914
D10Bwg0134e 7 141072157 to 141072330 173 DNA segment DNA segment, Chr 10, Brigham & Women's Genetics 0134 expressed
Tssr75575 7 141072183 to 141072196 13 - TSS region transcription start site region 75575
Tssr69906 7 141078126 to 141078137 11 + TSS region transcription start site region 69906
Tssr69907 7 141078170 to 141078181 11 + TSS region transcription start site region 69907
Tssr69908 7 141078188 to 141078207 19 + TSS region transcription start site region 69908
Pkp3 7 141078229 to 141090511 12282 + protein coding gene plakophilin 3
Tssr69909 7 141078266 to 141078314 48 + TSS region transcription start site region 69909
Tssr69910 7 141079125 to 141079167 42 + TSS region transcription start site region 69910
Tssr69911 7 141079746 to 141079755 9 + TSS region transcription start site region 69911
Tssr69912 7 141079759 to 141079781 22 + TSS region transcription start site region 69912
Tssr69913 7 141079784 to 141079806 22 + TSS region transcription start site region 69913
Tssr69914 7 141079848 to 141079859 11 + TSS region transcription start site region 69914
Cpgi19915 7 141079954 to 141080124 170 CpG island CpG island 19915
Tssr69915 7 141088121 to 141088184 63 + TSS region transcription start site region 69915
Cpgi19916 7 141088411 to 141088985 574 CpG island CpG island 19916
Tssr75576 7 141090369 to 141090408 39 - TSS region transcription start site region 75576
Sigirr 7 141091175 to 141100572 9397 - protein coding gene single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
Cpgi19917 7 141092091 to 141092715 624 CpG island CpG island 19917
Tssr75577 7 141094082 to 141094094 12 - TSS region transcription start site region 75577
Tssr75578 7 141094873 to 141094884 11 - TSS region transcription start site region 75578
Tssr75579 7 141094888 to 141094949 61 - TSS region transcription start site region 75579
Tssr75580 7 141094961 to 141094983 22 - TSS region transcription start site region 75580
Tssr75581 7 141096683 to 141096696 13 - TSS region transcription start site region 75581
Tssr75582 7 141096711 to 141096768 57 - TSS region transcription start site region 75582
Tssr75583 7 141096776 to 141096789 13 - TSS region transcription start site region 75583
Tssr75584 7 141096832 to 141096846 14 - TSS region transcription start site region 75584
Cpgi19918 7 141099665 to 141100756 1091 CpG island CpG island 19918
Tssr75585 7 141100526 to 141100551 25 - TSS region transcription start site region 75585
Tssr75586 7 141100555 to 141100587 32 - TSS region transcription start site region 75586
Ano9 7 141101212 to 141117806 16594 - protein coding gene anoctamin 9
Gm24962 7 141105929 to 141106037 108 - snRNA gene predicted gene, 24962
Tssr75587 7 141117772 to 141117797 25 - TSS region transcription start site region 75587
Tssr75588 7 141117804 to 141117825 21 - TSS region transcription start site region 75588
Gm33560 7 141122863 to 141126228 3365 + lncRNA gene predicted gene, 33560
Cpgi19919 7 141122953 to 141123755 802 CpG island CpG island 19919
Cpgi19920 7 141131048 to 141131804 756 CpG island CpG island 19920
Tssr69916 7 141131268 to 141131333 65 + TSS region transcription start site region 69916
Ptdss2 7 141131286 to 141156158 24872 + protein coding gene phosphatidylserine synthase 2
Tssr69917 7 141131341 to 141131378 37 + TSS region transcription start site region 69917
Tssr69918 7 141132433 to 141132450 17 + TSS region transcription start site region 69918
Tssr69919 7 141132458 to 141132476 18 + TSS region transcription start site region 69919
Tssr69920 7 141132478 to 141132501 23 + TSS region transcription start site region 69920
D7Ertd193e 7 141137774 to 141137981 207 DNA segment DNA segment, Chr 7, ERATO Doi 193, expressed
Tssr69921 7 141145127 to 141145130 3 + TSS region transcription start site region 69921
Tssr69922 7 141148951 to 141148977 26 + TSS region transcription start site region 69922
Rnh1 7 141160326 to 141172851 12525 - protein coding gene ribonuclease/angiogenin inhibitor 1
Tssr69923 7 141165954 to 141165961 7 + TSS region transcription start site region 69923
Tssr75589 7 141167870 to 141167909 39 - TSS region transcription start site region 75589
Tssr69924 7 141167995 to 141168015 20 + TSS region transcription start site region 69924
Cpgi19921 7 141168411 to 141168851 440 CpG island CpG island 19921
Tssr75590 7 141168657 to 141168666 9 - TSS region transcription start site region 75590
Tssr75591 7 141168671 to 141168811 140 - TSS region transcription start site region 75591
Tssr75592 7 141171160 to 141171181 21 - TSS region transcription start site region 75592
Cpgi19922 7 141172147 to 141173062 915 CpG island CpG island 19922
Tssr69925 7 141172600 to 141172644 44 + TSS region transcription start site region 69925
Tssr69926 7 141172666 to 141172677 11 + TSS region transcription start site region 69926
Tssr75593 7 141172788 to 141172803 15 - TSS region transcription start site region 75593
Tssr75594 7 141172809 to 141172862 53 - TSS region transcription start site region 75594
Tssr69927 7 141172914 to 141172957 43 + TSS region transcription start site region 69927
9430063H18Rik 7 141172934 to 141174079 1145 unclassified gene RIKEN cDNA 9430063H18 gene
Gm5905 7 141177885 to 141178464 579 - pseudogene predicted gene 5905
Tssr75595 7 141178507 to 141178518 11 - TSS region transcription start site region 75595
Gm22019 7 141181216 to 141181311 95 - snRNA gene predicted gene, 22019
Tssr75596 7 141183377 to 141183397 20 - TSS region transcription start site region 75596
Tssr75597 7 141183421 to 141183428 7 - TSS region transcription start site region 75597
Hras 7 141189934 to 141194004 4070 - protein coding gene Harvey rat sarcoma virus oncogene
Cpgi19923 7 141192923 to 141195277 2354 CpG island CpG island 19923
Tssr75598 7 141193934 to 141194012 78 - TSS region transcription start site region 75598
Tssr69928 7 141194107 to 141194118 11 + TSS region transcription start site region 69928
Tssr69929 7 141194122 to 141194140 18 + TSS region transcription start site region 69929
Tssr69930 7 141194148 to 141194191 43 + TSS region transcription start site region 69930
Lrrc56 7 141194157 to 141210055 15898 + protein coding gene leucine rich repeat containing 56
Tssr69931 7 141195047 to 141195083 36 + TSS region transcription start site region 69931
Tssr69932 7 141195131 to 141195146 15 + TSS region transcription start site region 69932
Tssr69933 7 141196850 to 141196858 8 + TSS region transcription start site region 69933