Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:140982180-142213011

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559 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(7Ifitm5-Ifitm6)1Masu 7 140948962 to 141016892 67930 chromosomal deletion deletion, Chr 7, M Azim Surani 1
Gm7514 7 140992580 to 140993513 933 - pseudogene predicted gene 7514
Gm33504 7 140994791 to 141004898 10107 - lncRNA gene predicted gene, 33504
Tssr75549 7 140997959 to 140997982 23 - TSS region transcription start site region 75549
Tssr69889 7 140998133 to 140998139 6 + TSS region transcription start site region 69889
Tssr75550 7 140999269 to 140999306 37 - TSS region transcription start site region 75550
Tssr75551 7 140999449 to 140999460 11 - TSS region transcription start site region 75551
Tssr75552 7 140999470 to 140999502 32 - TSS region transcription start site region 75552
Tssr69890 7 141006706 to 141006711 5 + TSS region transcription start site region 69890
Tssr69891 7 141008682 to 141008723 41 + TSS region transcription start site region 69891
Tssr69892 7 141009584 to 141009596 12 + TSS region transcription start site region 69892
Ifitm3 7 141009590 to 141010744 1154 - protein coding gene interferon induced transmembrane protein 3
Tssr69893 7 141009645 to 141009693 48 + TSS region transcription start site region 69893
Tssr75553 7 141009652 to 141009681 29 - TSS region transcription start site region 75553
Tssr75554 7 141009685 to 141009707 22 - TSS region transcription start site region 75554
Tssr69894 7 141009701 to 141009772 71 + TSS region transcription start site region 69894
Tssr75555 7 141009713 to 141009723 10 - TSS region transcription start site region 75555
Tssr75556 7 141009738 to 141009750 12 - TSS region transcription start site region 75556
Tssr75557 7 141009756 to 141009793 37 - TSS region transcription start site region 75557
Tssr75558 7 141009796 to 141009815 19 - TSS region transcription start site region 75558
Tssr75559 7 141009816 to 141009873 57 - TSS region transcription start site region 75559
Tssr69895 7 141010543 to 141010566 23 + TSS region transcription start site region 69895
Tssr75560 7 141010660 to 141010685 25 - TSS region transcription start site region 75560
Tssr75561 7 141010692 to 141010746 54 - TSS region transcription start site region 75561
Tssr75562 7 141010759 to 141010772 13 - TSS region transcription start site region 75562
Tssr75563 7 141011358 to 141011369 11 - TSS region transcription start site region 75563
Ifitm6 7 141015812 to 141016892 1080 - protein coding gene interferon induced transmembrane protein 6
Tssr2447 7 141016114 to 141016126 12 - TSS region transcription start site region 2447
Tssr75564 7 141016776 to 141016783 7 - TSS region transcription start site region 75564
Tssr75565 7 141016791 to 141016802 11 - TSS region transcription start site region 75565
Tssr75566 7 141016817 to 141016831 14 - TSS region transcription start site region 75566
Tssr75567 7 141016838 to 141016850 12 - TSS region transcription start site region 75567
Tssr75568 7 141016898 to 141016915 17 - TSS region transcription start site region 75568
Tssr75569 7 141016944 to 141016959 15 - TSS region transcription start site region 75569
Tssr75570 7 141017552 to 141017569 17 - TSS region transcription start site region 75570
Tssr75571 7 141017591 to 141017600 9 - TSS region transcription start site region 75571
Tssr75572 7 141018002 to 141018023 21 - TSS region transcription start site region 75572
Tssr69896 7 141020868 to 141020881 13 + TSS region transcription start site region 69896
Tssr69897 7 141022379 to 141022411 32 + TSS region transcription start site region 69897
Tssr69898 7 141025156 to 141025174 18 + TSS region transcription start site region 69898
Gm17387 7 141029131 to 141029620 489 + protein coding gene predicted gene, 17387
Tssr69899 7 141047992 to 141048002 10 + TSS region transcription start site region 69899
Tssr69900 7 141048015 to 141048034 19 + TSS region transcription start site region 69900
Gm45299 7 141051589 to 141053022 1433 + pseudogene predicted gene 45299
Tssr69901 7 141051646 to 141051676 30 + TSS region transcription start site region 69901
Gm39114 7 141058452 to 141060964 2512 - lncRNA gene predicted gene, 39114
Cpgi19911 7 141060360 to 141061872 1512 CpG island CpG island 19911
Tssr75573 7 141060843 to 141060867 24 - TSS region transcription start site region 75573
Tssr69902 7 141060962 to 141061046 84 + TSS region transcription start site region 69902
Tssr69903 7 141061097 to 141061109 12 + TSS region transcription start site region 69903
B4galnt4 7 141061274 to 141072119 10845 + protein coding gene beta-1,4-N-acetyl-galactosaminyl transferase 4
Tssr69904 7 141061303 to 141061311 8 + TSS region transcription start site region 69904
Tssr69905 7 141061315 to 141061330 15 + TSS region transcription start site region 69905
Tssr75574 7 141063045 to 141063046 1 - TSS region transcription start site region 75574
Cpgi19912 7 141068479 to 141068774 295 CpG island CpG island 19912
Cpgi19913 7 141070200 to 141071091 891 CpG island CpG island 19913
Cpgi19914 7 141071960 to 141072318 358 CpG island CpG island 19914
D10Bwg0134e 7 141072157 to 141072330 173 DNA segment DNA segment, Chr 10, Brigham & Women's Genetics 0134 expressed
Tssr75575 7 141072183 to 141072196 13 - TSS region transcription start site region 75575
Tssr69906 7 141078126 to 141078137 11 + TSS region transcription start site region 69906
Tssr69907 7 141078170 to 141078181 11 + TSS region transcription start site region 69907
Tssr69908 7 141078188 to 141078207 19 + TSS region transcription start site region 69908
Pkp3 7 141078229 to 141090511 12282 + protein coding gene plakophilin 3
Tssr69909 7 141078266 to 141078314 48 + TSS region transcription start site region 69909
Tssr69910 7 141079125 to 141079167 42 + TSS region transcription start site region 69910
Tssr69911 7 141079746 to 141079755 9 + TSS region transcription start site region 69911
Tssr69912 7 141079759 to 141079781 22 + TSS region transcription start site region 69912
Tssr69913 7 141079784 to 141079806 22 + TSS region transcription start site region 69913
Tssr69914 7 141079848 to 141079859 11 + TSS region transcription start site region 69914
Cpgi19915 7 141079954 to 141080124 170 CpG island CpG island 19915
Tssr69915 7 141088121 to 141088184 63 + TSS region transcription start site region 69915
Cpgi19916 7 141088411 to 141088985 574 CpG island CpG island 19916
Tssr75576 7 141090369 to 141090408 39 - TSS region transcription start site region 75576
Sigirr 7 141091175 to 141100572 9397 - protein coding gene single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
Cpgi19917 7 141092091 to 141092715 624 CpG island CpG island 19917
Tssr75577 7 141094082 to 141094094 12 - TSS region transcription start site region 75577
Tssr75578 7 141094873 to 141094884 11 - TSS region transcription start site region 75578
Tssr75579 7 141094888 to 141094949 61 - TSS region transcription start site region 75579
Tssr75580 7 141094961 to 141094983 22 - TSS region transcription start site region 75580
Tssr75581 7 141096683 to 141096696 13 - TSS region transcription start site region 75581
Tssr75582 7 141096711 to 141096768 57 - TSS region transcription start site region 75582
Tssr75583 7 141096776 to 141096789 13 - TSS region transcription start site region 75583
Tssr75584 7 141096832 to 141096846 14 - TSS region transcription start site region 75584
Cpgi19918 7 141099665 to 141100756 1091 CpG island CpG island 19918
Tssr75585 7 141100526 to 141100551 25 - TSS region transcription start site region 75585
Tssr75586 7 141100555 to 141100587 32 - TSS region transcription start site region 75586
Ano9 7 141101212 to 141117806 16594 - protein coding gene anoctamin 9
Gm24962 7 141105929 to 141106037 108 - snRNA gene predicted gene, 24962
Tssr75587 7 141117772 to 141117797 25 - TSS region transcription start site region 75587
Tssr75588 7 141117804 to 141117825 21 - TSS region transcription start site region 75588
Gm33560 7 141122863 to 141126228 3365 + lncRNA gene predicted gene, 33560
Cpgi19919 7 141122953 to 141123755 802 CpG island CpG island 19919
Cpgi19920 7 141131048 to 141131804 756 CpG island CpG island 19920
Tssr69916 7 141131268 to 141131333 65 + TSS region transcription start site region 69916
Ptdss2 7 141131286 to 141156158 24872 + protein coding gene phosphatidylserine synthase 2
Tssr69917 7 141131341 to 141131378 37 + TSS region transcription start site region 69917
Tssr69918 7 141132433 to 141132450 17 + TSS region transcription start site region 69918
Tssr69919 7 141132458 to 141132476 18 + TSS region transcription start site region 69919
Tssr69920 7 141132478 to 141132501 23 + TSS region transcription start site region 69920
D7Ertd193e 7 141137774 to 141137981 207 DNA segment DNA segment, Chr 7, ERATO Doi 193, expressed
Tssr69921 7 141145127 to 141145130 3 + TSS region transcription start site region 69921
Tssr69922 7 141148951 to 141148977 26 + TSS region transcription start site region 69922
Rnh1 7 141160326 to 141172851 12525 - protein coding gene ribonuclease/angiogenin inhibitor 1
Tssr69923 7 141165954 to 141165961 7 + TSS region transcription start site region 69923
Tssr75589 7 141167870 to 141167909 39 - TSS region transcription start site region 75589
Tssr69924 7 141167995 to 141168015 20 + TSS region transcription start site region 69924
Cpgi19921 7 141168411 to 141168851 440 CpG island CpG island 19921
Tssr75590 7 141168657 to 141168666 9 - TSS region transcription start site region 75590
Tssr75591 7 141168671 to 141168811 140 - TSS region transcription start site region 75591
Tssr75592 7 141171160 to 141171181 21 - TSS region transcription start site region 75592
Cpgi19922 7 141172147 to 141173062 915 CpG island CpG island 19922
Tssr69925 7 141172600 to 141172644 44 + TSS region transcription start site region 69925
Tssr69926 7 141172666 to 141172677 11 + TSS region transcription start site region 69926
Tssr75593 7 141172788 to 141172803 15 - TSS region transcription start site region 75593
Tssr75594 7 141172809 to 141172862 53 - TSS region transcription start site region 75594
Tssr69927 7 141172914 to 141172957 43 + TSS region transcription start site region 69927
9430063H18Rik 7 141172934 to 141174079 1145 unclassified gene RIKEN cDNA 9430063H18 gene
Gm5905 7 141177885 to 141178464 579 - pseudogene predicted gene 5905
Tssr75595 7 141178507 to 141178518 11 - TSS region transcription start site region 75595
Gm22019 7 141181216 to 141181311 95 - snRNA gene predicted gene, 22019
Tssr75596 7 141183377 to 141183397 20 - TSS region transcription start site region 75596
Tssr75597 7 141183421 to 141183428 7 - TSS region transcription start site region 75597
Hras 7 141189934 to 141194004 4070 - protein coding gene Harvey rat sarcoma virus oncogene
Cpgi19923 7 141192923 to 141195277 2354 CpG island CpG island 19923
Tssr75598 7 141193934 to 141194012 78 - TSS region transcription start site region 75598
Tssr69928 7 141194107 to 141194118 11 + TSS region transcription start site region 69928
Tssr69929 7 141194122 to 141194140 18 + TSS region transcription start site region 69929
Tssr69930 7 141194148 to 141194191 43 + TSS region transcription start site region 69930
Lrrc56 7 141194157 to 141210055 15898 + protein coding gene leucine rich repeat containing 56
Tssr69931 7 141195047 to 141195083 36 + TSS region transcription start site region 69931
Tssr69932 7 141195131 to 141195146 15 + TSS region transcription start site region 69932
Tssr69933 7 141196850 to 141196858 8 + TSS region transcription start site region 69933
Lmntd2 7 141209992 to 141214080 4088 - protein coding gene lamin tail domain containing 2
Tssr75599 7 141214455 to 141214476 21 - TSS region transcription start site region 75599
Cpgi19924 7 141215372 to 141216404 1032 CpG island CpG island 19924
Tssr75600 7 141215640 to 141215661 21 - TSS region transcription start site region 75600
Tssr75601 7 141215671 to 141215705 34 - TSS region transcription start site region 75601
Tssr69934 7 141215852 to 141215967 115 + TSS region transcription start site region 69934
Rassf7 7 141215860 to 141218658 2798 + protein coding gene Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
Tssr69935 7 141216183 to 141216198 15 + TSS region transcription start site region 69935
Tssr69936 7 141216626 to 141216644 18 + TSS region transcription start site region 69936
Tssr69937 7 141216646 to 141216660 14 + TSS region transcription start site region 69937
Cpgi19925 7 141221367 to 141222336 969 CpG island CpG island 19925
Mir210 7 141221384 to 141221493 109 - miRNA gene microRNA 210
Tssr75602 7 141221706 to 141221728 22 - TSS region transcription start site region 75602
Cpgi19926 7 141228263 to 141229466 1203 CpG island CpG island 19926
Tssr69938 7 141228766 to 141228813 47 + TSS region transcription start site region 69938
Phrf1 7 141228784 to 141262750 33966 + protein coding gene PHD and ring finger domains 1
Tssr69939 7 141228818 to 141228834 16 + TSS region transcription start site region 69939
Tssr75603 7 141231493 to 141231499 6 - TSS region transcription start site region 75603
Tssr69940 7 141259740 to 141259766 26 + TSS region transcription start site region 69940
Tssr69941 7 141263183 to 141263198 15 + TSS region transcription start site region 69941
Irf7 7 141263183 to 141266499 3316 - protein coding gene interferon regulatory factor 7
Tssr75604 7 141263525 to 141263570 45 - TSS region transcription start site region 75604
Tssr75605 7 141263683 to 141263764 81 - TSS region transcription start site region 75605
Tssr75606 7 141263821 to 141263842 21 - TSS region transcription start site region 75606
Tssr75607 7 141263897 to 141263917 20 - TSS region transcription start site region 75607
Tssr75608 7 141263954 to 141263971 17 - TSS region transcription start site region 75608
Tssr75609 7 141263972 to 141263989 17 - TSS region transcription start site region 75609
Tssr75610 7 141263997 to 141264010 13 - TSS region transcription start site region 75610
Tssr75611 7 141264253 to 141264274 21 - TSS region transcription start site region 75611
Tssr75612 7 141264515 to 141264526 11 - TSS region transcription start site region 75612
Tssr75613 7 141265243 to 141265258 15 - TSS region transcription start site region 75613
Tssr69942 7 141265412 to 141265428 16 + TSS region transcription start site region 69942
Tssr75614 7 141265453 to 141265479 26 - TSS region transcription start site region 75614
Tssr75615 7 141265719 to 141265739 20 - TSS region transcription start site region 75615
Tssr75616 7 141265857 to 141265881 24 - TSS region transcription start site region 75616
Tssr75617 7 141265928 to 141265941 13 - TSS region transcription start site region 75617
Tssr75618 7 141265960 to 141265993 33 - TSS region transcription start site region 75618
Cpgi19927 7 141265981 to 141266415 434 CpG island CpG island 19927
Tssr75619 7 141266018 to 141266030 12 - TSS region transcription start site region 75619
Tssr75620 7 141266415 to 141266430 15 - TSS region transcription start site region 75620
Cpgi19928 7 141268985 to 141269417 432 CpG island CpG island 19928
Cdhr5 7 141269083 to 141276786 7703 - protein coding gene cadherin-related family member 5
Tssr75621 7 141269451 to 141269475 24 - TSS region transcription start site region 75621
Tssr75622 7 141269946 to 141269957 11 - TSS region transcription start site region 75622
Tssr75623 7 141271726 to 141271738 12 - TSS region transcription start site region 75623
Tssr75624 7 141271756 to 141271768 12 - TSS region transcription start site region 75624
Tssr75625 7 141271810 to 141271821 11 - TSS region transcription start site region 75625
Tssr75626 7 141273091 to 141273117 26 - TSS region transcription start site region 75626
Tssr75627 7 141274021 to 141274033 12 - TSS region transcription start site region 75627
Tssr75628 7 141276729 to 141276791 62 - TSS region transcription start site region 75628
Sct 7 141278330 to 141279133 803 - protein coding gene secretin
Cpgi19929 7 141278824 to 141279491 667 CpG island CpG island 19929
Tssr75629 7 141279121 to 141279139 18 - TSS region transcription start site region 75629
Cpgi19930 7 141291951 to 141292683 732 CpG island CpG island 19930
Drd4 7 141291974 to 141296238 4264 + protein coding gene dopamine receptor D4
Tssr69943 7 141291988 to 141292033 45 + TSS region transcription start site region 69943
Cpgi19931 7 141293561 to 141294931 1370 CpG island CpG island 19931
Deaf1 7 141297180 to 141327690 30510 - protein coding gene DEAF1, transcription factor
Tssr75630 7 141322029 to 141322043 14 - TSS region transcription start site region 75630
Cpgi19932 7 141326626 to 141328726 2100 CpG island CpG island 19932
Tssr75631 7 141327510 to 141327556 46 - TSS region transcription start site region 75631
Tssr75632 7 141327557 to 141327607 50 - TSS region transcription start site region 75632
Tssr75633 7 141327649 to 141327661 12 - TSS region transcription start site region 75633
Tssr75634 7 141327675 to 141327694 19 - TSS region transcription start site region 75634
Tssr75635 7 141327700 to 141327737 37 - TSS region transcription start site region 75635
Tssr75636 7 141327738 to 141327749 11 - TSS region transcription start site region 75636
Tmem80 7 141327743 to 141337156 9413 + protein coding gene transmembrane protein 80
Tssr69944 7 141327840 to 141327882 42 + TSS region transcription start site region 69944