Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:140781471-140931513

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Syce1 7 140777229 to 140787852 10623 - protein coding gene synaptonemal complex central element protein 1
Gm29799 7 140784515 to 140785001 486 + pseudogene predicted gene, 29799
Cpgi19905 7 140787333 to 140788040 707 CpG island CpG island 19905
Tssr75522 7 140787826 to 140787872 46 - TSS region transcription start site region 75522
D7Mit258 7 140791752 to 140791863 111 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 258
1700112H04Rik 7 140792055 to 140792452 397 lncRNA gene RIKEN cDNA 1700112H04 gene
Zfp941 7 140807449 to 140822178 14729 - protein coding gene zinc finger protein 941
Gm45785 7 140818087 to 140856331 38244 - protein coding gene predicted gene 45785
Tssr75523 7 140822124 to 140822193 69 - TSS region transcription start site region 75523
Tssr69837 7 140834911 to 140834947 36 + TSS region transcription start site region 69837
Urah 7 140835023 to 140837968 2945 + protein coding gene urate (5-hydroxyiso-) hydrolase
Tssr69838 7 140835108 to 140835181 73 + TSS region transcription start site region 69838
Tssr69839 7 140835188 to 140835189 1 + TSS region transcription start site region 69839
Tssr69840 7 140835204 to 140835241 37 + TSS region transcription start site region 69840
Tssr69841 7 140835265 to 140835291 26 + TSS region transcription start site region 69841
Tssr69842 7 140835303 to 140835316 13 + TSS region transcription start site region 69842
Tssr69843 7 140835466 to 140835476 10 + TSS region transcription start site region 69843
Tssr69844 7 140835490 to 140835501 11 + TSS region transcription start site region 69844
Tssr69845 7 140835524 to 140835537 13 + TSS region transcription start site region 69845
Tssr69846 7 140835548 to 140835613 65 + TSS region transcription start site region 69846
C330022C24Rik 7 140837221 to 140845689 8468 - antisense lncRNA gene RIKEN cDNA C330022C24 gene
Tssr69847 7 140845562 to 140845567 5 + TSS region transcription start site region 69847
Scgb1c1 7 140845565 to 140846769 1204 + protein coding gene secretoglobin, family 1C, member 1
Tssr69848 7 140847754 to 140847760 6 + TSS region transcription start site region 69848
Tssr69849 7 140847770 to 140847779 9 + TSS region transcription start site region 69849
Tssr69850 7 140847784 to 140847793 9 + TSS region transcription start site region 69850
Tssr69851 7 140847801 to 140847813 12 + TSS region transcription start site region 69851
Tssr69852 7 140847816 to 140847829 13 + TSS region transcription start site region 69852
Tssr69853 7 140847843 to 140847848 5 + TSS region transcription start site region 69853
Odf3 7 140847916 to 140850925 3009 + protein coding gene outer dense fiber of sperm tails 3
Bet1l 7 140853384 to 140856383 2999 - protein coding gene Bet1 golgi vesicular membrane trafficking protein like
Cpgi19906 7 140855841 to 140858427 2586 CpG island CpG island 19906
Tssr75524 7 140856254 to 140856325 71 - TSS region transcription start site region 75524
Tssr69854 7 140856327 to 140856370 43 + TSS region transcription start site region 69854
Tssr69855 7 140856443 to 140856464 21 + TSS region transcription start site region 69855
Tssr69856 7 140856471 to 140856513 42 + TSS region transcription start site region 69856
Tssr69857 7 140856514 to 140856530 16 + TSS region transcription start site region 69857
Tssr75525 7 140856702 to 140856722 20 - TSS region transcription start site region 75525
Tssr69858 7 140856736 to 140856767 31 + TSS region transcription start site region 69858
Tssr69859 7 140857388 to 140857457 69 + TSS region transcription start site region 69859
Ric8a 7 140857397 to 140863731 6334 + protein coding gene RIC8 guanine nucleotide exchange factor A
Sirt3 7 140863666 to 140882309 18643 - protein coding gene sirtuin 3
Tssr75526 7 140874088 to 140874109 21 - TSS region transcription start site region 75526
Cpgi19907 7 140881615 to 140882607 992 CpG island CpG island 19907
Tssr75527 7 140881811 to 140881849 38 - TSS region transcription start site region 75527
Tssr75528 7 140881857 to 140881871 14 - TSS region transcription start site region 75528
Tssr69860 7 140881898 to 140881910 12 + TSS region transcription start site region 69860
Tssr69861 7 140881960 to 140881983 23 + TSS region transcription start site region 69861
Tssr75529 7 140882252 to 140882272 20 - TSS region transcription start site region 75529
Tssr75530 7 140882274 to 140882330 56 - TSS region transcription start site region 75530
Tssr69862 7 140882381 to 140882426 45 + TSS region transcription start site region 69862
Psmd13 7 140882394 to 140898642 16248 + protein coding gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
Tssr69863 7 140882430 to 140882441 11 + TSS region transcription start site region 69863
Tssr69864 7 140890842 to 140890850 8 + TSS region transcription start site region 69864
Gm15542 7 140890887 to 140892080 1193 + pseudogene predicted gene 15542
Cox8b 7 140898945 to 140900446 1501 - protein coding gene cytochrome c oxidase subunit 8B
Tssr75531 7 140900385 to 140900396 11 - TSS region transcription start site region 75531
Tssr75532 7 140900401 to 140900419 18 - TSS region transcription start site region 75532
Tssr69865 7 140906002 to 140906033 31 + TSS region transcription start site region 69865
Tssr69866 7 140906049 to 140906091 42 + TSS region transcription start site region 69866
BC024386 7 140906064 to 140907979 1915 + lncRNA gene cDNA sequence BC023486
Tssr69867 7 140907071 to 140907076 5 + TSS region transcription start site region 69867
Cpgi19908 7 140908691 to 140909058 367 CpG island CpG island 19908
Tssr69868 7 140920857 to 140920881 24 + TSS region transcription start site region 69868
Tssr69869 7 140920896 to 140920911 15 + TSS region transcription start site region 69869
Nlrp6 7 140920902 to 140929192 8290 + protein coding gene NLR family, pyrin domain containing 6
Tssr69870 7 140920918 to 140920929 11 + TSS region transcription start site region 69870
Tssr69871 7 140920940 to 140920941 1 + TSS region transcription start site region 69871
Cpgi19909 7 140921623 to 140923416 1793 CpG island CpG island 19909
D7Ertd187e 7 140925474 to 140925697 223 DNA segment DNA segment, Chr 7, ERATO Doi 187, expressed
D7Mit257 7 140927048 to 140927168 120 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 257