Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:140720887-141062080

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190 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Olfr542-ps1 7 140721340 to 140722212 872 + pseudogene olfactory receptor 542, pseudogene 1
Tssr75516 7 140759825 to 140759828 3 - TSS region transcription start site region 75516
Tssr75517 7 140760744 to 140760780 36 - TSS region transcription start site region 75517
Tssr69818 7 140763810 to 140763828 18 + TSS region transcription start site region 69818
Cyp2e1 7 140763832 to 140774981 11149 + protein coding gene cytochrome P450, family 2, subfamily e, polypeptide 1
Tssr69819 7 140764911 to 140764932 21 + TSS region transcription start site region 69819
Tssr69820 7 140769091 to 140769102 11 + TSS region transcription start site region 69820
Tssr69821 7 140769104 to 140769109 5 + TSS region transcription start site region 69821
Tssr69822 7 140769133 to 140769150 17 + TSS region transcription start site region 69822
Tssr69823 7 140769164 to 140769190 26 + TSS region transcription start site region 69823
Tssr69824 7 140769205 to 140769214 9 + TSS region transcription start site region 69824
Tssr75518 7 140769220 to 140769235 15 - TSS region transcription start site region 75518
Tssr69825 7 140769555 to 140769584 29 + TSS region transcription start site region 69825
Tssr69826 7 140769636 to 140769651 15 + TSS region transcription start site region 69826
Tssr69827 7 140770047 to 140770060 13 + TSS region transcription start site region 69827
Tssr69828 7 140770072 to 140770082 10 + TSS region transcription start site region 69828
Tssr69829 7 140770141 to 140770201 60 + TSS region transcription start site region 69829
Tssr75519 7 140770178 to 140770196 18 - TSS region transcription start site region 75519
Tssr75520 7 140770219 to 140770233 14 - TSS region transcription start site region 75520
Tssr69830 7 140770934 to 140770954 20 + TSS region transcription start site region 69830
Tssr69831 7 140770981 to 140771003 22 + TSS region transcription start site region 69831
Tssr69832 7 140773030 to 140773061 31 + TSS region transcription start site region 69832
Tssr69833 7 140773077 to 140773111 34 + TSS region transcription start site region 69833
Tssr69834 7 140773135 to 140773150 15 + TSS region transcription start site region 69834
Tssr75521 7 140773154 to 140773209 55 - TSS region transcription start site region 75521
Tssr69835 7 140773625 to 140773645 20 + TSS region transcription start site region 69835
Tssr69836 7 140773664 to 140773681 17 + TSS region transcription start site region 69836
Syce1 7 140777229 to 140787852 10623 - protein coding gene synaptonemal complex central element protein 1
Gm29799 7 140784515 to 140785001 486 + pseudogene predicted gene, 29799
Cpgi19905 7 140787333 to 140788040 707 CpG island CpG island 19905
Tssr75522 7 140787826 to 140787872 46 - TSS region transcription start site region 75522
D7Mit258 7 140791752 to 140791863 111 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 258
1700112H04Rik 7 140792055 to 140792452 397 lncRNA gene RIKEN cDNA 1700112H04 gene
Zfp941 7 140807449 to 140822178 14729 - protein coding gene zinc finger protein 941
Gm45785 7 140818087 to 140856331 38244 - protein coding gene predicted gene 45785
Tssr75523 7 140822124 to 140822193 69 - TSS region transcription start site region 75523
Tssr69837 7 140834911 to 140834947 36 + TSS region transcription start site region 69837
Urah 7 140835023 to 140837968 2945 + protein coding gene urate (5-hydroxyiso-) hydrolase
Tssr69838 7 140835108 to 140835181 73 + TSS region transcription start site region 69838
Tssr69839 7 140835188 to 140835189 1 + TSS region transcription start site region 69839
Tssr69840 7 140835204 to 140835241 37 + TSS region transcription start site region 69840
Tssr69841 7 140835265 to 140835291 26 + TSS region transcription start site region 69841
Tssr69842 7 140835303 to 140835316 13 + TSS region transcription start site region 69842
Tssr69843 7 140835466 to 140835476 10 + TSS region transcription start site region 69843
Tssr69844 7 140835490 to 140835501 11 + TSS region transcription start site region 69844
Tssr69845 7 140835524 to 140835537 13 + TSS region transcription start site region 69845
Tssr69846 7 140835548 to 140835613 65 + TSS region transcription start site region 69846
C330022C24Rik 7 140837221 to 140845689 8468 - antisense lncRNA gene RIKEN cDNA C330022C24 gene
Tssr69847 7 140845562 to 140845567 5 + TSS region transcription start site region 69847
Scgb1c1 7 140845565 to 140846769 1204 + protein coding gene secretoglobin, family 1C, member 1
Tssr69848 7 140847754 to 140847760 6 + TSS region transcription start site region 69848
Tssr69849 7 140847770 to 140847779 9 + TSS region transcription start site region 69849
Tssr69850 7 140847784 to 140847793 9 + TSS region transcription start site region 69850
Tssr69851 7 140847801 to 140847813 12 + TSS region transcription start site region 69851
Tssr69852 7 140847816 to 140847829 13 + TSS region transcription start site region 69852
Tssr69853 7 140847843 to 140847848 5 + TSS region transcription start site region 69853
Odf3 7 140847916 to 140850925 3009 + protein coding gene outer dense fiber of sperm tails 3
Bet1l 7 140853384 to 140856383 2999 - protein coding gene Bet1 golgi vesicular membrane trafficking protein like
Cpgi19906 7 140855841 to 140858427 2586 CpG island CpG island 19906
Tssr75524 7 140856254 to 140856325 71 - TSS region transcription start site region 75524
Tssr69854 7 140856327 to 140856370 43 + TSS region transcription start site region 69854
Tssr69855 7 140856443 to 140856464 21 + TSS region transcription start site region 69855
Tssr69856 7 140856471 to 140856513 42 + TSS region transcription start site region 69856
Tssr69857 7 140856514 to 140856530 16 + TSS region transcription start site region 69857
Tssr75525 7 140856702 to 140856722 20 - TSS region transcription start site region 75525
Tssr69858 7 140856736 to 140856767 31 + TSS region transcription start site region 69858
Tssr69859 7 140857388 to 140857457 69 + TSS region transcription start site region 69859
Ric8a 7 140857397 to 140863731 6334 + protein coding gene RIC8 guanine nucleotide exchange factor A
Sirt3 7 140863666 to 140882309 18643 - protein coding gene sirtuin 3
Tssr75526 7 140874088 to 140874109 21 - TSS region transcription start site region 75526
Cpgi19907 7 140881615 to 140882607 992 CpG island CpG island 19907
Tssr75527 7 140881811 to 140881849 38 - TSS region transcription start site region 75527
Tssr75528 7 140881857 to 140881871 14 - TSS region transcription start site region 75528
Tssr69860 7 140881898 to 140881910 12 + TSS region transcription start site region 69860
Tssr69861 7 140881960 to 140881983 23 + TSS region transcription start site region 69861
Tssr75529 7 140882252 to 140882272 20 - TSS region transcription start site region 75529
Tssr75530 7 140882274 to 140882330 56 - TSS region transcription start site region 75530
Tssr69862 7 140882381 to 140882426 45 + TSS region transcription start site region 69862
Psmd13 7 140882394 to 140898642 16248 + protein coding gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
Tssr69863 7 140882430 to 140882441 11 + TSS region transcription start site region 69863
Tssr69864 7 140890842 to 140890850 8 + TSS region transcription start site region 69864
Gm15542 7 140890887 to 140892080 1193 + pseudogene predicted gene 15542
Cox8b 7 140898945 to 140900446 1501 - protein coding gene cytochrome c oxidase subunit 8B
Tssr75531 7 140900385 to 140900396 11 - TSS region transcription start site region 75531
Tssr75532 7 140900401 to 140900419 18 - TSS region transcription start site region 75532
Tssr69865 7 140906002 to 140906033 31 + TSS region transcription start site region 69865
Tssr69866 7 140906049 to 140906091 42 + TSS region transcription start site region 69866
BC024386 7 140906064 to 140907979 1915 + lncRNA gene cDNA sequence BC023486
Tssr69867 7 140907071 to 140907076 5 + TSS region transcription start site region 69867
Cpgi19908 7 140908691 to 140909058 367 CpG island CpG island 19908
Tssr69868 7 140920857 to 140920881 24 + TSS region transcription start site region 69868
Tssr69869 7 140920896 to 140920911 15 + TSS region transcription start site region 69869
Nlrp6 7 140920902 to 140929192 8290 + protein coding gene NLR family, pyrin domain containing 6
Tssr69870 7 140920918 to 140920929 11 + TSS region transcription start site region 69870
Tssr69871 7 140920940 to 140920941 1 + TSS region transcription start site region 69871
Cpgi19909 7 140921623 to 140923416 1793 CpG island CpG island 19909
D7Ertd187e 7 140925474 to 140925697 223 DNA segment DNA segment, Chr 7, ERATO Doi 187, expressed
D7Mit257 7 140927048 to 140927168 120 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 257
Pgghg 7 140941391 to 140947664 6273 + protein coding gene protein glucosylgalactosylhydroxylysine glucosidase
Tssr75533 7 140941458 to 140941461 3 - TSS region transcription start site region 75533
Cpgi19910 7 140941483 to 140941951 468 CpG island CpG island 19910
Tssr69872 7 140941521 to 140941534 13 + TSS region transcription start site region 69872
Tssr69873 7 140941550 to 140941615 65 + TSS region transcription start site region 69873
Tssr69874 7 140941886 to 140941956 70 + TSS region transcription start site region 69874
Tssr69875 7 140942909 to 140942918 9 + TSS region transcription start site region 69875
Tssr69876 7 140943069 to 140943080 11 + TSS region transcription start site region 69876
Tssr69877 7 140943575 to 140943623 48 + TSS region transcription start site region 69877
Del(7Ifitm5-Ifitm6)1Masu 7 140948962 to 141016892 67930 chromosomal deletion deletion, Chr 7, M Azim Surani 1
Ifitm5 7 140948962 to 140950239 1277 - protein coding gene interferon induced transmembrane protein 5
Gm45717 7 140949222 to 140955937 6715 - protein coding gene predicted gene 45717
Tssr75534 7 140950236 to 140950257 21 - TSS region transcription start site region 75534
Tssr75535 7 140950282 to 140950291 9 - TSS region transcription start site region 75535
Tssr75536 7 140952181 to 140952185 4 - TSS region transcription start site region 75536
Tssr69878 7 140954445 to 140954451 6 + TSS region transcription start site region 69878
Ifitm2 7 140954839 to 140955961 1122 - protein coding gene interferon induced transmembrane protein 2
Tssr75537 7 140954942 to 140954976 34 - TSS region transcription start site region 75537
Tssr69879 7 140954990 to 140955014 24 + TSS region transcription start site region 69879
Tssr75538 7 140955148 to 140955160 12 - TSS region transcription start site region 75538
Tssr75539 7 140955438 to 140955493 55 - TSS region transcription start site region 75539
Tssr75540 7 140955696 to 140955715 19 - TSS region transcription start site region 75540
Tssr75541 7 140955817 to 140955822 5 - TSS region transcription start site region 75541
Tssr75542 7 140955902 to 140955913 11 - TSS region transcription start site region 75542
Tssr75543 7 140955915 to 140955926 11 - TSS region transcription start site region 75543
Tssr75544 7 140955960 to 140955997 37 - TSS region transcription start site region 75544
Tssr75545 7 140956003 to 140956014 11 - TSS region transcription start site region 75545
Tssr75546 7 140956175 to 140956182 7 - TSS region transcription start site region 75546
Tssr75547 7 140956273 to 140956284 11 - TSS region transcription start site region 75547
Tssr75548 7 140956296 to 140956315 19 - TSS region transcription start site region 75548
Tssr69880 7 140967357 to 140967362 5 + TSS region transcription start site region 69880
Tssr69881 7 140967377 to 140967388 11 + TSS region transcription start site region 69881
Ifitm1 7 140967429 to 140969828 2399 + protein coding gene interferon induced transmembrane protein 1
Tssr69882 7 140968034 to 140968047 13 + TSS region transcription start site region 69882
Tssr69883 7 140968066 to 140968102 36 + TSS region transcription start site region 69883
Tssr69884 7 140968112 to 140968153 41 + TSS region transcription start site region 69884
Tssr69885 7 140968220 to 140968237 17 + TSS region transcription start site region 69885
Tssr69886 7 140968238 to 140968256 18 + TSS region transcription start site region 69886
Tssr69887 7 140968270 to 140968273 3 + TSS region transcription start site region 69887
Tssr69888 7 140976392 to 140976405 13 + TSS region transcription start site region 69888
Gm7514 7 140992580 to 140993513 933 - pseudogene predicted gene 7514
Gm33504 7 140994791 to 141004898 10107 - lncRNA gene predicted gene, 33504
Tssr75549 7 140997959 to 140997982 23 - TSS region transcription start site region 75549
Tssr69889 7 140998133 to 140998139 6 + TSS region transcription start site region 69889
Tssr75550 7 140999269 to 140999306 37 - TSS region transcription start site region 75550
Tssr75551 7 140999449 to 140999460 11 - TSS region transcription start site region 75551
Tssr75552 7 140999470 to 140999502 32 - TSS region transcription start site region 75552
Tssr69890 7 141006706 to 141006711 5 + TSS region transcription start site region 69890
Tssr69891 7 141008682 to 141008723 41 + TSS region transcription start site region 69891
Tssr69892 7 141009584 to 141009596 12 + TSS region transcription start site region 69892
Ifitm3 7 141009590 to 141010744 1154 - protein coding gene interferon induced transmembrane protein 3
Tssr69893 7 141009645 to 141009693 48 + TSS region transcription start site region 69893
Tssr75553 7 141009652 to 141009681 29 - TSS region transcription start site region 75553
Tssr75554 7 141009685 to 141009707 22 - TSS region transcription start site region 75554
Tssr69894 7 141009701 to 141009772 71 + TSS region transcription start site region 69894
Tssr75555 7 141009713 to 141009723 10 - TSS region transcription start site region 75555
Tssr75556 7 141009738 to 141009750 12 - TSS region transcription start site region 75556
Tssr75557 7 141009756 to 141009793 37 - TSS region transcription start site region 75557
Tssr75558 7 141009796 to 141009815 19 - TSS region transcription start site region 75558
Tssr75559 7 141009816 to 141009873 57 - TSS region transcription start site region 75559
Tssr69895 7 141010543 to 141010566 23 + TSS region transcription start site region 69895
Tssr75560 7 141010660 to 141010685 25 - TSS region transcription start site region 75560
Tssr75561 7 141010692 to 141010746 54 - TSS region transcription start site region 75561
Tssr75562 7 141010759 to 141010772 13 - TSS region transcription start site region 75562
Tssr75563 7 141011358 to 141011369 11 - TSS region transcription start site region 75563
Ifitm6 7 141015812 to 141016892 1080 - protein coding gene interferon induced transmembrane protein 6
Tssr2447 7 141016114 to 141016126 12 - TSS region transcription start site region 2447
Tssr75564 7 141016776 to 141016783 7 - TSS region transcription start site region 75564
Tssr75565 7 141016791 to 141016802 11 - TSS region transcription start site region 75565
Tssr75566 7 141016817 to 141016831 14 - TSS region transcription start site region 75566
Tssr75567 7 141016838 to 141016850 12 - TSS region transcription start site region 75567
Tssr75568 7 141016898 to 141016915 17 - TSS region transcription start site region 75568
Tssr75569 7 141016944 to 141016959 15 - TSS region transcription start site region 75569
Tssr75570 7 141017552 to 141017569 17 - TSS region transcription start site region 75570
Tssr75571 7 141017591 to 141017600 9 - TSS region transcription start site region 75571
Tssr75572 7 141018002 to 141018023 21 - TSS region transcription start site region 75572
Tssr69896 7 141020868 to 141020881 13 + TSS region transcription start site region 69896
Tssr69897 7 141022379 to 141022411 32 + TSS region transcription start site region 69897
Tssr69898 7 141025156 to 141025174 18 + TSS region transcription start site region 69898
Gm17387 7 141029131 to 141029620 489 + protein coding gene predicted gene, 17387
Tssr69899 7 141047992 to 141048002 10 + TSS region transcription start site region 69899
Tssr69900 7 141048015 to 141048034 19 + TSS region transcription start site region 69900
Gm45299 7 141051589 to 141053022 1433 + pseudogene predicted gene 45299
Tssr69901 7 141051646 to 141051676 30 + TSS region transcription start site region 69901
Gm39114 7 141058452 to 141060964 2512 - lncRNA gene predicted gene, 39114
Cpgi19911 7 141060360 to 141061872 1512 CpG island CpG island 19911
Tssr75573 7 141060843 to 141060867 24 - TSS region transcription start site region 75573
Tssr69902 7 141060962 to 141061046 84 + TSS region transcription start site region 69902
Tssr69903 7 141061097 to 141061109 12 + TSS region transcription start site region 69903
B4galnt4 7 141061274 to 141072119 10845 + protein coding gene beta-1,4-N-acetyl-galactosaminyl transferase 4
Tssr69904 7 141061303 to 141061311 8 + TSS region transcription start site region 69904
Tssr69905 7 141061315 to 141061330 15 + TSS region transcription start site region 69905