Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:140644164-140894190

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89 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Olfr53 7 140646452 to 140652919 6467 + protein coding gene olfactory receptor 53
Gm39112 7 140657010 to 140676567 19557 - lncRNA gene predicted gene, 39112
Olfr539 7 140667289 to 140668248 959 + protein coding gene olfactory receptor 539
Olfr540-ps1 7 140669126 to 140669737 611 - pseudogene olfactory receptor 540, pseudogene 1
Cpgi19904 7 140676246 to 140676423 177 CpG island CpG island 19904
Olfr45 7 140690907 to 140691842 935 + protein coding gene olfactory receptor 45
Olfr541 7 140704253 to 140705191 938 + protein coding gene olfactory receptor 541
Olfr542-ps1 7 140721340 to 140722212 872 + pseudogene olfactory receptor 542, pseudogene 1
Tssr75516 7 140759825 to 140759828 3 - TSS region transcription start site region 75516
Tssr75517 7 140760744 to 140760780 36 - TSS region transcription start site region 75517
Tssr69818 7 140763810 to 140763828 18 + TSS region transcription start site region 69818
Cyp2e1 7 140763832 to 140774981 11149 + protein coding gene cytochrome P450, family 2, subfamily e, polypeptide 1
Tssr69819 7 140764911 to 140764932 21 + TSS region transcription start site region 69819
Tssr69820 7 140769091 to 140769102 11 + TSS region transcription start site region 69820
Tssr69821 7 140769104 to 140769109 5 + TSS region transcription start site region 69821
Tssr69822 7 140769133 to 140769150 17 + TSS region transcription start site region 69822
Tssr69823 7 140769164 to 140769190 26 + TSS region transcription start site region 69823
Tssr69824 7 140769205 to 140769214 9 + TSS region transcription start site region 69824
Tssr75518 7 140769220 to 140769235 15 - TSS region transcription start site region 75518
Tssr69825 7 140769555 to 140769584 29 + TSS region transcription start site region 69825
Tssr69826 7 140769636 to 140769651 15 + TSS region transcription start site region 69826
Tssr69827 7 140770047 to 140770060 13 + TSS region transcription start site region 69827
Tssr69828 7 140770072 to 140770082 10 + TSS region transcription start site region 69828
Tssr69829 7 140770141 to 140770201 60 + TSS region transcription start site region 69829
Tssr75519 7 140770178 to 140770196 18 - TSS region transcription start site region 75519
Tssr75520 7 140770219 to 140770233 14 - TSS region transcription start site region 75520
Tssr69830 7 140770934 to 140770954 20 + TSS region transcription start site region 69830
Tssr69831 7 140770981 to 140771003 22 + TSS region transcription start site region 69831
Tssr69832 7 140773030 to 140773061 31 + TSS region transcription start site region 69832
Tssr69833 7 140773077 to 140773111 34 + TSS region transcription start site region 69833
Tssr69834 7 140773135 to 140773150 15 + TSS region transcription start site region 69834
Tssr75521 7 140773154 to 140773209 55 - TSS region transcription start site region 75521
Tssr69835 7 140773625 to 140773645 20 + TSS region transcription start site region 69835
Tssr69836 7 140773664 to 140773681 17 + TSS region transcription start site region 69836
Syce1 7 140777229 to 140787852 10623 - protein coding gene synaptonemal complex central element protein 1
Gm29799 7 140784515 to 140785001 486 + pseudogene predicted gene, 29799
Cpgi19905 7 140787333 to 140788040 707 CpG island CpG island 19905
Tssr75522 7 140787826 to 140787872 46 - TSS region transcription start site region 75522
D7Mit258 7 140791752 to 140791863 111 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 258
1700112H04Rik 7 140792055 to 140792452 397 lncRNA gene RIKEN cDNA 1700112H04 gene
Zfp941 7 140807449 to 140822178 14729 - protein coding gene zinc finger protein 941
Gm45785 7 140818087 to 140856331 38244 - protein coding gene predicted gene 45785
Tssr75523 7 140822124 to 140822193 69 - TSS region transcription start site region 75523
Tssr69837 7 140834911 to 140834947 36 + TSS region transcription start site region 69837
Urah 7 140835023 to 140837968 2945 + protein coding gene urate (5-hydroxyiso-) hydrolase
Tssr69838 7 140835108 to 140835181 73 + TSS region transcription start site region 69838
Tssr69839 7 140835188 to 140835189 1 + TSS region transcription start site region 69839
Tssr69840 7 140835204 to 140835241 37 + TSS region transcription start site region 69840
Tssr69841 7 140835265 to 140835291 26 + TSS region transcription start site region 69841
Tssr69842 7 140835303 to 140835316 13 + TSS region transcription start site region 69842
Tssr69843 7 140835466 to 140835476 10 + TSS region transcription start site region 69843
Tssr69844 7 140835490 to 140835501 11 + TSS region transcription start site region 69844
Tssr69845 7 140835524 to 140835537 13 + TSS region transcription start site region 69845
Tssr69846 7 140835548 to 140835613 65 + TSS region transcription start site region 69846
C330022C24Rik 7 140837221 to 140845689 8468 - antisense lncRNA gene RIKEN cDNA C330022C24 gene
Tssr69847 7 140845562 to 140845567 5 + TSS region transcription start site region 69847
Scgb1c1 7 140845565 to 140846769 1204 + protein coding gene secretoglobin, family 1C, member 1
Tssr69848 7 140847754 to 140847760 6 + TSS region transcription start site region 69848
Tssr69849 7 140847770 to 140847779 9 + TSS region transcription start site region 69849
Tssr69850 7 140847784 to 140847793 9 + TSS region transcription start site region 69850
Tssr69851 7 140847801 to 140847813 12 + TSS region transcription start site region 69851
Tssr69852 7 140847816 to 140847829 13 + TSS region transcription start site region 69852
Tssr69853 7 140847843 to 140847848 5 + TSS region transcription start site region 69853
Odf3 7 140847916 to 140850925 3009 + protein coding gene outer dense fiber of sperm tails 3
Bet1l 7 140853384 to 140856383 2999 - protein coding gene Bet1 golgi vesicular membrane trafficking protein like
Cpgi19906 7 140855841 to 140858427 2586 CpG island CpG island 19906
Tssr75524 7 140856254 to 140856325 71 - TSS region transcription start site region 75524
Tssr69854 7 140856327 to 140856370 43 + TSS region transcription start site region 69854
Tssr69855 7 140856443 to 140856464 21 + TSS region transcription start site region 69855
Tssr69856 7 140856471 to 140856513 42 + TSS region transcription start site region 69856
Tssr69857 7 140856514 to 140856530 16 + TSS region transcription start site region 69857
Tssr75525 7 140856702 to 140856722 20 - TSS region transcription start site region 75525
Tssr69858 7 140856736 to 140856767 31 + TSS region transcription start site region 69858
Tssr69859 7 140857388 to 140857457 69 + TSS region transcription start site region 69859
Ric8a 7 140857397 to 140863731 6334 + protein coding gene RIC8 guanine nucleotide exchange factor A
Sirt3 7 140863666 to 140882309 18643 - protein coding gene sirtuin 3
Tssr75526 7 140874088 to 140874109 21 - TSS region transcription start site region 75526
Cpgi19907 7 140881615 to 140882607 992 CpG island CpG island 19907
Tssr75527 7 140881811 to 140881849 38 - TSS region transcription start site region 75527
Tssr75528 7 140881857 to 140881871 14 - TSS region transcription start site region 75528
Tssr69860 7 140881898 to 140881910 12 + TSS region transcription start site region 69860
Tssr69861 7 140881960 to 140881983 23 + TSS region transcription start site region 69861
Tssr75529 7 140882252 to 140882272 20 - TSS region transcription start site region 75529
Tssr75530 7 140882274 to 140882330 56 - TSS region transcription start site region 75530
Tssr69862 7 140882381 to 140882426 45 + TSS region transcription start site region 69862
Psmd13 7 140882394 to 140898642 16248 + protein coding gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 13
Tssr69863 7 140882430 to 140882441 11 + TSS region transcription start site region 69863
Tssr69864 7 140890842 to 140890850 8 + TSS region transcription start site region 69864
Gm15542 7 140890887 to 140892080 1193 + pseudogene predicted gene 15542