Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:140042495-140502509

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111 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Msx3 7 140046157 to 140049089 2932 - protein coding gene msh homeobox 3
Cpgi19889 7 140047666 to 140049666 2000 CpG island CpG island 19889
Tssr75493 7 140049083 to 140049089 6 - TSS region transcription start site region 75493
Tssr75494 7 140049148 to 140049180 32 - TSS region transcription start site region 75494
Tssr69778 7 140049266 to 140049302 36 + TSS region transcription start site region 69778
Tssr75495 7 140050892 to 140050903 11 - TSS region transcription start site region 75495
Cpgi19890 7 140057554 to 140058507 953 CpG island CpG island 19890
Cpgi19891 7 140061262 to 140061684 422 CpG island CpG island 19891
Caly 7 140069880 to 140082548 12668 - protein coding gene calcyon neuron-specific vesicular protein
Cpgi19892 7 140069972 to 140070723 751 CpG island CpG island 19892
Cpgi19893 7 140080829 to 140081465 636 CpG island CpG island 19893
Cpgi19894 7 140082179 to 140082548 369 CpG island CpG island 19894
Tssr75496 7 140082199 to 140082201 2 - TSS region transcription start site region 75496
Tssr75497 7 140082222 to 140082236 14 - TSS region transcription start site region 75497
Tssr75498 7 140082246 to 140082284 38 - TSS region transcription start site region 75498
Tssr75499 7 140082489 to 140082556 67 - TSS region transcription start site region 75499
Tssr75500 7 140082559 to 140082570 11 - TSS region transcription start site region 75500
Tssr69779 7 140090930 to 140090931 1 + TSS region transcription start site region 69779
Tssr2443 7 140093262 to 140093274 12 + TSS region transcription start site region 2443
Tssr69780 7 140093388 to 140093402 14 + TSS region transcription start site region 69780
Prap1 7 140093395 to 140097200 3805 + protein coding gene proline-rich acidic protein 1
Tssr69781 7 140093404 to 140093415 11 + TSS region transcription start site region 69781
Tssr69782 7 140095027 to 140095041 14 + TSS region transcription start site region 69782
Tssr69783 7 140096720 to 140096731 11 + TSS region transcription start site region 69783
Tssr2444 7 140096732 to 140096737 5 + TSS region transcription start site region 2444
Fuom 7 140096770 to 140102441 5671 - protein coding gene fucose mutarotase
Tssr69784 7 140096964 to 140096978 14 + TSS region transcription start site region 69784
Tssr69785 7 140097053 to 140097080 27 + TSS region transcription start site region 69785
Tssr69786 7 140097091 to 140097119 28 + TSS region transcription start site region 69786
Tssr69787 7 140097121 to 140097152 31 + TSS region transcription start site region 69787
Tssr75501 7 140102004 to 140102021 17 - TSS region transcription start site region 75501
Cpgi19895 7 140102090 to 140102480 390 CpG island CpG island 19895
Tssr75502 7 140102326 to 140102357 31 - TSS region transcription start site region 75502
Tssr75503 7 140102367 to 140102378 11 - TSS region transcription start site region 75503
Tssr75504 7 140102384 to 140102428 44 - TSS region transcription start site region 75504
Echs1 7 140105723 to 140116423 10700 - protein coding gene enoyl Coenzyme A hydratase, short chain, 1, mitochondrial
Paox 7 140115794 to 140134334 18540 + protein coding gene polyamine oxidase (exo-N4-amino)
Tssr69788 7 140115794 to 140115804 10 + TSS region transcription start site region 69788
Tssr69789 7 140115812 to 140115826 14 + TSS region transcription start site region 69789
Tssr69790 7 140115839 to 140115850 11 + TSS region transcription start site region 69790
Tssr69791 7 140115873 to 140115889 16 + TSS region transcription start site region 69791
Cpgi19896 7 140116089 to 140116750 661 CpG island CpG island 19896
Tssr75505 7 140116395 to 140116428 33 - TSS region transcription start site region 75505
Tssr75506 7 140116438 to 140116449 11 - TSS region transcription start site region 75506
Cpgi19897 7 140125447 to 140126021 574 CpG island CpG island 19897
Tssr69792 7 140125651 to 140125727 76 + TSS region transcription start site region 69792
Tssr69793 7 140133014 to 140133015 1 + TSS region transcription start site region 69793
Cpgi19898 7 140137450 to 140138248 798 CpG island CpG island 19898
Tssr75507 7 140137532 to 140137561 29 - TSS region transcription start site region 75507
Tssr69794 7 140137559 to 140137593 34 + TSS region transcription start site region 69794
Mtg1 7 140137564 to 140150786 13222 + protein coding gene mitochondrial ribosome-associated GTPase 1
Tssr69795 7 140137595 to 140137668 73 + TSS region transcription start site region 69795
Tssr69796 7 140137949 to 140137972 23 + TSS region transcription start site region 69796
Sprn 7 140150628 to 140154659 4031 - protein coding gene shadow of prion protein
Cpgi19899 7 140153208 to 140153733 525 CpG island CpG island 19899
Cpgi19900 7 140154282 to 140154831 549 CpG island CpG island 19900
Tssr75508 7 140154642 to 140154698 56 - TSS region transcription start site region 75508
Tssr75509 7 140154712 to 140154745 33 - TSS region transcription start site region 75509
Olfr522 7 140162010 to 140162948 938 - protein coding gene olfactory receptor 522
Tssr75510 7 140164129 to 140164174 45 - TSS region transcription start site region 75510
Tssr75511 7 140164289 to 140164316 27 - TSS region transcription start site region 75511
Tssr69797 7 140173299 to 140173313 14 + TSS region transcription start site region 69797
Tssr69798 7 140173345 to 140173378 33 + TSS region transcription start site region 69798
Olfr523 7 140176104 to 140177057 953 + protein coding gene olfactory receptor 523
Tssr69799 7 140193424 to 140193441 17 + TSS region transcription start site region 69799
Olfr524 7 140201336 to 140205279 3943 - protein coding gene olfactory receptor 524
Tssr2445 7 140203674 to 140203685 11 + TSS region transcription start site region 2445
Tssr69800 7 140203691 to 140203715 24 + TSS region transcription start site region 69800
Tssr69801 7 140203724 to 140203736 12 + TSS region transcription start site region 69801
Tssr69802 7 140203778 to 140203788 10 + TSS region transcription start site region 69802
Tssr69803 7 140203823 to 140203849 26 + TSS region transcription start site region 69803
D7Mit167 7 140204865 to 140205053 188 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 167
Tssr69804 7 140207268 to 140207281 13 + TSS region transcription start site region 69804
Tssr75512 7 140208184 to 140208195 11 - TSS region transcription start site region 75512
Tssr69805 7 140218088 to 140218099 11 + TSS region transcription start site region 69805
Tssr75513 7 140218219 to 140218230 11 - TSS region transcription start site region 75513
Tssr69806 7 140218258 to 140218286 28 + TSS region transcription start site region 69806
Cd163l1 7 140218267 to 140231145 12878 + protein coding gene CD163 molecule-like 1
Tssr69807 7 140218321 to 140218340 19 + TSS region transcription start site region 69807
Tssr69808 7 140218353 to 140218369 16 + TSS region transcription start site region 69808
Tssr69809 7 140218387 to 140218403 16 + TSS region transcription start site region 69809
Tssr2446 7 140218408 to 140218417 9 + TSS region transcription start site region 2446
Cpgi19901 7 140224374 to 140224750 376 CpG island CpG island 19901
Cpgi19902 7 140228798 to 140228971 173 CpG island CpG island 19902
Tssr69810 7 140247150 to 140247175 25 + TSS region transcription start site region 69810
Tssr69811 7 140247267 to 140247314 47 + TSS region transcription start site region 69811
5830411N06Rik 7 140247284 to 140300736 53452 + protein coding gene RIKEN cDNA 5830411N06 gene
Tssr69812 7 140247316 to 140247319 3 + TSS region transcription start site region 69812
Tssr69813 7 140261480 to 140261497 17 + TSS region transcription start site region 69813
Tssr69814 7 140272495 to 140272509 14 + TSS region transcription start site region 69814
Tssr69815 7 140287964 to 140287978 14 + TSS region transcription start site region 69815
Tssr75514 7 140300663 to 140300664 1 - TSS region transcription start site region 75514
Gm6314 7 140315729 to 140316113 384 + pseudogene predicted pseudogene 6314
Tssr69816 7 140315761 to 140315785 24 + TSS region transcription start site region 69816
Gm45456 7 140315813 to 140316055 242 + pseudogene predicted gene 45456
Olfr525 7 140322701 to 140323630 929 + protein coding gene olfactory receptor 525
Olfr527 7 140335864 to 140336781 917 + protein coding gene olfactory receptor 527
Olfr528-ps1 7 140341490 to 140342195 705 + pseudogene olfactory receptor 528, pseudogene 1
Olfr60 7 140345052 to 140345987 935 - protein coding gene olfactory receptor 60
Tssr69817 7 140353564 to 140353569 5 + TSS region transcription start site region 69817
Tssr75515 7 140357082 to 140357110 28 - TSS region transcription start site region 75515
Olfr529-ps1 7 140368563 to 140368941 378 + pseudogene olfactory receptor 529, pseudogene 1
Olfr530 7 140372685 to 140373608 923 - protein coding gene olfactory receptor 530
Gm6376 7 140385765 to 140386344 579 - pseudogene predicted gene 6376
Cpgi19903 7 140386241 to 140386520 279 CpG island CpG island 19903
Olfr531 7 140400130 to 140401044 914 - protein coding gene olfactory receptor 531
Olfr532 7 140418842 to 140419771 929 - protein coding gene olfactory receptor 532
Olfr533 7 140466203 to 140467165 962 + protein coding gene olfactory receptor 533
Olfr534-ps1 7 140478743 to 140479359 616 - pseudogene olfactory receptor 534, pseudogene 1
Olfr535 7 140492640 to 140493578 938 + protein coding gene olfactory receptor 535
Olfr536 7 140500853 to 140507318 6465 - protein coding gene olfactory receptor 536