Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:140001064-141812979

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721 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tubgcp2 7 139995955 to 140036669 40714 - protein coding gene tubulin, gamma complex associated protein 2
Cpgi19888 7 140035870 to 140037140 1270 CpG island CpG island 19888
Tssr75489 7 140036256 to 140036318 62 - TSS region transcription start site region 75489
Tssr75490 7 140036333 to 140036350 17 - TSS region transcription start site region 75490
Tssr75491 7 140036363 to 140036400 37 - TSS region transcription start site region 75491
Tssr69777 7 140036385 to 140036452 67 + TSS region transcription start site region 69777
Zfp511 7 140036391 to 140040602 4211 + protein coding gene zinc finger protein 511
Tssr75492 7 140036626 to 140036675 49 - TSS region transcription start site region 75492
Msx3 7 140046157 to 140049089 2932 - protein coding gene msh homeobox 3
Cpgi19889 7 140047666 to 140049666 2000 CpG island CpG island 19889
Tssr75493 7 140049083 to 140049089 6 - TSS region transcription start site region 75493
Tssr75494 7 140049148 to 140049180 32 - TSS region transcription start site region 75494
Tssr69778 7 140049266 to 140049302 36 + TSS region transcription start site region 69778
Tssr75495 7 140050892 to 140050903 11 - TSS region transcription start site region 75495
Cpgi19890 7 140057554 to 140058507 953 CpG island CpG island 19890
Cpgi19891 7 140061262 to 140061684 422 CpG island CpG island 19891
Caly 7 140069880 to 140082548 12668 - protein coding gene calcyon neuron-specific vesicular protein
Cpgi19892 7 140069972 to 140070723 751 CpG island CpG island 19892
Cpgi19893 7 140080829 to 140081465 636 CpG island CpG island 19893
Cpgi19894 7 140082179 to 140082548 369 CpG island CpG island 19894
Tssr75496 7 140082199 to 140082201 2 - TSS region transcription start site region 75496
Tssr75497 7 140082222 to 140082236 14 - TSS region transcription start site region 75497
Tssr75498 7 140082246 to 140082284 38 - TSS region transcription start site region 75498
Tssr75499 7 140082489 to 140082556 67 - TSS region transcription start site region 75499
Tssr75500 7 140082559 to 140082570 11 - TSS region transcription start site region 75500
Tssr69779 7 140090930 to 140090931 1 + TSS region transcription start site region 69779
Tssr2443 7 140093262 to 140093274 12 + TSS region transcription start site region 2443
Tssr69780 7 140093388 to 140093402 14 + TSS region transcription start site region 69780
Prap1 7 140093395 to 140097200 3805 + protein coding gene proline-rich acidic protein 1
Tssr69781 7 140093404 to 140093415 11 + TSS region transcription start site region 69781
Tssr69782 7 140095027 to 140095041 14 + TSS region transcription start site region 69782
Tssr69783 7 140096720 to 140096731 11 + TSS region transcription start site region 69783
Tssr2444 7 140096732 to 140096737 5 + TSS region transcription start site region 2444
Fuom 7 140096770 to 140102441 5671 - protein coding gene fucose mutarotase
Tssr69784 7 140096964 to 140096978 14 + TSS region transcription start site region 69784
Tssr69785 7 140097053 to 140097080 27 + TSS region transcription start site region 69785
Tssr69786 7 140097091 to 140097119 28 + TSS region transcription start site region 69786
Tssr69787 7 140097121 to 140097152 31 + TSS region transcription start site region 69787
Tssr75501 7 140102004 to 140102021 17 - TSS region transcription start site region 75501
Cpgi19895 7 140102090 to 140102480 390 CpG island CpG island 19895
Tssr75502 7 140102326 to 140102357 31 - TSS region transcription start site region 75502
Tssr75503 7 140102367 to 140102378 11 - TSS region transcription start site region 75503
Tssr75504 7 140102384 to 140102428 44 - TSS region transcription start site region 75504
Echs1 7 140105723 to 140116423 10700 - protein coding gene enoyl Coenzyme A hydratase, short chain, 1, mitochondrial
Paox 7 140115794 to 140134334 18540 + protein coding gene polyamine oxidase (exo-N4-amino)
Tssr69788 7 140115794 to 140115804 10 + TSS region transcription start site region 69788
Tssr69789 7 140115812 to 140115826 14 + TSS region transcription start site region 69789
Tssr69790 7 140115839 to 140115850 11 + TSS region transcription start site region 69790
Tssr69791 7 140115873 to 140115889 16 + TSS region transcription start site region 69791
Cpgi19896 7 140116089 to 140116750 661 CpG island CpG island 19896
Tssr75505 7 140116395 to 140116428 33 - TSS region transcription start site region 75505
Tssr75506 7 140116438 to 140116449 11 - TSS region transcription start site region 75506
Cpgi19897 7 140125447 to 140126021 574 CpG island CpG island 19897
Tssr69792 7 140125651 to 140125727 76 + TSS region transcription start site region 69792
Tssr69793 7 140133014 to 140133015 1 + TSS region transcription start site region 69793
Cpgi19898 7 140137450 to 140138248 798 CpG island CpG island 19898
Tssr75507 7 140137532 to 140137561 29 - TSS region transcription start site region 75507
Tssr69794 7 140137559 to 140137593 34 + TSS region transcription start site region 69794
Mtg1 7 140137564 to 140150786 13222 + protein coding gene mitochondrial ribosome-associated GTPase 1
Tssr69795 7 140137595 to 140137668 73 + TSS region transcription start site region 69795
Tssr69796 7 140137949 to 140137972 23 + TSS region transcription start site region 69796
Sprn 7 140150628 to 140154659 4031 - protein coding gene shadow of prion protein
Cpgi19899 7 140153208 to 140153733 525 CpG island CpG island 19899
Cpgi19900 7 140154282 to 140154831 549 CpG island CpG island 19900
Tssr75508 7 140154642 to 140154698 56 - TSS region transcription start site region 75508
Tssr75509 7 140154712 to 140154745 33 - TSS region transcription start site region 75509
Olfr522 7 140162010 to 140162948 938 - protein coding gene olfactory receptor 522
Tssr75510 7 140164129 to 140164174 45 - TSS region transcription start site region 75510
Tssr75511 7 140164289 to 140164316 27 - TSS region transcription start site region 75511
Tssr69797 7 140173299 to 140173313 14 + TSS region transcription start site region 69797
Tssr69798 7 140173345 to 140173378 33 + TSS region transcription start site region 69798
Olfr523 7 140176104 to 140177057 953 + protein coding gene olfactory receptor 523
Tssr69799 7 140193424 to 140193441 17 + TSS region transcription start site region 69799
Olfr524 7 140201336 to 140205279 3943 - protein coding gene olfactory receptor 524
Tssr2445 7 140203674 to 140203685 11 + TSS region transcription start site region 2445
Tssr69800 7 140203691 to 140203715 24 + TSS region transcription start site region 69800
Tssr69801 7 140203724 to 140203736 12 + TSS region transcription start site region 69801
Tssr69802 7 140203778 to 140203788 10 + TSS region transcription start site region 69802
Tssr69803 7 140203823 to 140203849 26 + TSS region transcription start site region 69803
D7Mit167 7 140204865 to 140205053 188 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 167
Tssr69804 7 140207268 to 140207281 13 + TSS region transcription start site region 69804
Tssr75512 7 140208184 to 140208195 11 - TSS region transcription start site region 75512
Tssr69805 7 140218088 to 140218099 11 + TSS region transcription start site region 69805
Tssr75513 7 140218219 to 140218230 11 - TSS region transcription start site region 75513
Tssr69806 7 140218258 to 140218286 28 + TSS region transcription start site region 69806
Cd163l1 7 140218267 to 140231145 12878 + protein coding gene CD163 molecule-like 1
Tssr69807 7 140218321 to 140218340 19 + TSS region transcription start site region 69807
Tssr69808 7 140218353 to 140218369 16 + TSS region transcription start site region 69808
Tssr69809 7 140218387 to 140218403 16 + TSS region transcription start site region 69809
Tssr2446 7 140218408 to 140218417 9 + TSS region transcription start site region 2446
Cpgi19901 7 140224374 to 140224750 376 CpG island CpG island 19901
Cpgi19902 7 140228798 to 140228971 173 CpG island CpG island 19902
Tssr69810 7 140247150 to 140247175 25 + TSS region transcription start site region 69810
Tssr69811 7 140247267 to 140247314 47 + TSS region transcription start site region 69811
5830411N06Rik 7 140247284 to 140300736 53452 + protein coding gene RIKEN cDNA 5830411N06 gene
Tssr69812 7 140247316 to 140247319 3 + TSS region transcription start site region 69812
Tssr69813 7 140261480 to 140261497 17 + TSS region transcription start site region 69813
Tssr69814 7 140272495 to 140272509 14 + TSS region transcription start site region 69814
Tssr69815 7 140287964 to 140287978 14 + TSS region transcription start site region 69815
Tssr75514 7 140300663 to 140300664 1 - TSS region transcription start site region 75514
Gm6314 7 140315729 to 140316113 384 + pseudogene predicted pseudogene 6314
Tssr69816 7 140315761 to 140315785 24 + TSS region transcription start site region 69816
Gm45456 7 140315813 to 140316055 242 + pseudogene predicted gene 45456
Olfr525 7 140322701 to 140323630 929 + protein coding gene olfactory receptor 525
Olfr527 7 140335864 to 140336781 917 + protein coding gene olfactory receptor 527
Olfr528-ps1 7 140341490 to 140342195 705 + pseudogene olfactory receptor 528, pseudogene 1
Olfr60 7 140345052 to 140345987 935 - protein coding gene olfactory receptor 60
Tssr69817 7 140353564 to 140353569 5 + TSS region transcription start site region 69817
Tssr75515 7 140357082 to 140357110 28 - TSS region transcription start site region 75515
Olfr529-ps1 7 140368563 to 140368941 378 + pseudogene olfactory receptor 529, pseudogene 1
Olfr530 7 140372685 to 140373608 923 - protein coding gene olfactory receptor 530
Gm6376 7 140385765 to 140386344 579 - pseudogene predicted gene 6376
Cpgi19903 7 140386241 to 140386520 279 CpG island CpG island 19903
Olfr531 7 140400130 to 140401044 914 - protein coding gene olfactory receptor 531
Olfr532 7 140418842 to 140419771 929 - protein coding gene olfactory receptor 532
Olfr533 7 140466203 to 140467165 962 + protein coding gene olfactory receptor 533
Olfr534-ps1 7 140478743 to 140479359 616 - pseudogene olfactory receptor 534, pseudogene 1
Olfr535 7 140492640 to 140493578 938 + protein coding gene olfactory receptor 535
Olfr536 7 140500853 to 140507318 6465 - protein coding gene olfactory receptor 536
Olfr537-ps1 7 140538819 to 140539441 622 + polymorphic pseudogene olfactory receptor 537, pseudogene 1
Olfr538 7 140574155 to 140575087 932 + protein coding gene olfactory receptor 538
Olfr46 7 140601340 to 140611124 9784 + protein coding gene olfactory receptor 46
Olfr61 7 140637703 to 140638638 935 + protein coding gene olfactory receptor 61
Olfr53 7 140646452 to 140652919 6467 + protein coding gene olfactory receptor 53
Gm39112 7 140657010 to 140676567 19557 - lncRNA gene predicted gene, 39112
Olfr539 7 140667289 to 140668248 959 + protein coding gene olfactory receptor 539
Olfr540-ps1 7 140669126 to 140669737 611 - pseudogene olfactory receptor 540, pseudogene 1
Cpgi19904 7 140676246 to 140676423 177 CpG island CpG island 19904
Olfr45 7 140690907 to 140691842 935 + protein coding gene olfactory receptor 45
Olfr541 7 140704253 to 140705191 938 + protein coding gene olfactory receptor 541
Olfr542-ps1 7 140721340 to 140722212 872 + pseudogene olfactory receptor 542, pseudogene 1
Tssr75516 7 140759825 to 140759828 3 - TSS region transcription start site region 75516
Tssr75517 7 140760744 to 140760780 36 - TSS region transcription start site region 75517
Tssr69818 7 140763810 to 140763828 18 + TSS region transcription start site region 69818
Cyp2e1 7 140763832 to 140774981 11149 + protein coding gene cytochrome P450, family 2, subfamily e, polypeptide 1
Tssr69819 7 140764911 to 140764932 21 + TSS region transcription start site region 69819
Tssr69820 7 140769091 to 140769102 11 + TSS region transcription start site region 69820
Tssr69821 7 140769104 to 140769109 5 + TSS region transcription start site region 69821
Tssr69822 7 140769133 to 140769150 17 + TSS region transcription start site region 69822
Tssr69823 7 140769164 to 140769190 26 + TSS region transcription start site region 69823
Tssr69824 7 140769205 to 140769214 9 + TSS region transcription start site region 69824
Tssr75518 7 140769220 to 140769235 15 - TSS region transcription start site region 75518
Tssr69825 7 140769555 to 140769584 29 + TSS region transcription start site region 69825
Tssr69826 7 140769636 to 140769651 15 + TSS region transcription start site region 69826
Tssr69827 7 140770047 to 140770060 13 + TSS region transcription start site region 69827
Tssr69828 7 140770072 to 140770082 10 + TSS region transcription start site region 69828
Tssr69829 7 140770141 to 140770201 60 + TSS region transcription start site region 69829
Tssr75519 7 140770178 to 140770196 18 - TSS region transcription start site region 75519
Tssr75520 7 140770219 to 140770233 14 - TSS region transcription start site region 75520
Tssr69830 7 140770934 to 140770954 20 + TSS region transcription start site region 69830
Tssr69831 7 140770981 to 140771003 22 + TSS region transcription start site region 69831
Tssr69832 7 140773030 to 140773061 31 + TSS region transcription start site region 69832
Tssr69833 7 140773077 to 140773111 34 + TSS region transcription start site region 69833
Tssr69834 7 140773135 to 140773150 15 + TSS region transcription start site region 69834
Tssr75521 7 140773154 to 140773209 55 - TSS region transcription start site region 75521
Tssr69835 7 140773625 to 140773645 20 + TSS region transcription start site region 69835
Tssr69836 7 140773664 to 140773681 17 + TSS region transcription start site region 69836
Syce1 7 140777229 to 140787852 10623 - protein coding gene synaptonemal complex central element protein 1
Gm29799 7 140784515 to 140785001 486 + pseudogene predicted gene, 29799
Cpgi19905 7 140787333 to 140788040 707 CpG island CpG island 19905
Tssr75522 7 140787826 to 140787872 46 - TSS region transcription start site region 75522
D7Mit258 7 140791752 to 140791863 111 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 258
1700112H04Rik 7 140792055 to 140792452 397 lncRNA gene RIKEN cDNA 1700112H04 gene
Zfp941 7 140807449 to 140822178 14729 - protein coding gene zinc finger protein 941
Gm45785 7 140818087 to 140856331 38244 - protein coding gene predicted gene 45785
Tssr75523 7 140822124 to 140822193 69 - TSS region transcription start site region 75523
Tssr69837 7 140834911 to 140834947 36 + TSS region transcription start site region 69837
Urah 7 140835023 to 140837968 2945 + protein coding gene urate (5-hydroxyiso-) hydrolase
Tssr69838 7 140835108 to 140835181 73 + TSS region transcription start site region 69838
Tssr69839 7 140835188 to 140835189 1 + TSS region transcription start site region 69839
Tssr69840 7 140835204 to 140835241 37 + TSS region transcription start site region 69840
Tssr69841 7 140835265 to 140835291 26 + TSS region transcription start site region 69841
Tssr69842 7 140835303 to 140835316 13 + TSS region transcription start site region 69842
Tssr69843 7 140835466 to 140835476 10 + TSS region transcription start site region 69843
Tssr69844 7 140835490 to 140835501 11 + TSS region transcription start site region 69844
Tssr69845 7 140835524 to 140835537 13 + TSS region transcription start site region 69845
Tssr69846 7 140835548 to 140835613 65 + TSS region transcription start site region 69846
C330022C24Rik 7 140837221 to 140845689 8468 - antisense lncRNA gene RIKEN cDNA C330022C24 gene
Tssr69847 7 140845562 to 140845567 5 + TSS region transcription start site region 69847
Scgb1c1 7 140845565 to 140846769 1204 + protein coding gene secretoglobin, family 1C, member 1
Tssr69848 7 140847754 to 140847760 6 + TSS region transcription start site region 69848
Tssr69849 7 140847770 to 140847779 9 + TSS region transcription start site region 69849
Tssr69850 7 140847784 to 140847793 9 + TSS region transcription start site region 69850
Tssr69851 7 140847801 to 140847813 12 + TSS region transcription start site region 69851
Tssr69852 7 140847816 to 140847829 13 + TSS region transcription start site region 69852
Tssr69853 7 140847843 to 140847848 5 + TSS region transcription start site region 69853
Odf3 7 140847916 to 140850925 3009 + protein coding gene outer dense fiber of sperm tails 3
Bet1l 7 140853384 to 140856383 2999 - protein coding gene Bet1 golgi vesicular membrane trafficking protein like
Cpgi19906 7 140855841 to 140858427 2586 CpG island CpG island 19906
Tssr75524 7 140856254 to 140856325 71 - TSS region transcription start site region 75524
Tssr69854 7 140856327 to 140856370 43 + TSS region transcription start site region 69854
Tssr69855 7 140856443 to 140856464 21 + TSS region transcription start site region 69855
Tssr69856 7 140856471 to 140856513 42 + TSS region transcription start site region 69856
Tssr69857 7 140856514 to 140856530 16 + TSS region transcription start site region 69857
Tssr75525 7 140856702 to 140856722 20 - TSS region transcription start site region 75525
Tssr69858 7 140856736 to 140856767 31 + TSS region transcription start site region 69858
Tssr69859 7 140857388 to 140857457 69 + TSS region transcription start site region 69859
Ric8a 7 140857397 to 140863731 6334 + protein coding gene RIC8 guanine nucleotide exchange factor A
Sirt3 7 140863666 to 140882309 18643 - protein coding gene sirtuin 3
Tssr75526 7 140874088 to 140874109 21 - TSS region transcription start site region 75526