Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:139500951-139783817

26 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Inpp5a	7	139389109 to 139579652	190543	+	protein coding gene	inositol polyphosphate-5-phosphatase A
Lfibq7	7	139468137 to 139680398	212261		QTL	liver fibrosis QTL 7
Tssr69726	7	139525727 to 139525730	3	+	TSS region	transcription start site region 69726
Tssr69727	7	139538111 to 139538139	28	+	TSS region	transcription start site region 69727
Gm33697	7	139543100 to 139551497	8397	-	pseudogene	predicted gene, 33697
Tssr69728	7	139552938 to 139552954	16	+	TSS region	transcription start site region 69728
Tssr69729	7	139553021 to 139553034	13	+	TSS region	transcription start site region 69729
Nkx6-2	7	139579376 to 139582797	3421	-	protein coding gene	NK6 homeobox 2
Cpgi19878	7	139580884 to 139583460	2576		CpG island	CpG island 19878
Tssr75444	7	139582792 to 139582808	16	-	TSS region	transcription start site region 75444
Gm33031	7	139582975 to 139604901	21926	+	lncRNA gene	predicted gene, 33031
Cpgi19879	7	139584172 to 139585730	1558		CpG island	CpG island 19879
Tssr69730	7	139586340 to 139586341	1	+	TSS region	transcription start site region 69730
Cfap46	7	139600951 to 139683817	82866	-	protein coding gene	cilia and flagella associated protein 46
Gm39111	7	139605890 to 139635046	29156	+	lncRNA gene	predicted gene, 39111
Tssr75445	7	139638988 to 139638992	4	-	TSS region	transcription start site region 75445
Gm4459	7	139659688 to 139660155	467	-	pseudogene	predicted gene 4459
Tssr75446	7	139660179 to 139660180	1	-	TSS region	transcription start site region 75446
Cpgi19880	7	139683629 to 139684160	531		CpG island	CpG island 19880
Tssr75447	7	139683797 to 139683853	56	-	TSS region	transcription start site region 75447
Gm32680	7	139684054 to 139686742	2688	+	lncRNA gene	predicted gene, 32680
Tssr69731	7	139719356 to 139719359	3	+	TSS region	transcription start site region 69731
Rpl21-ps13	7	139719399 to 139719881	482	+	pseudogene	ribosomal protein L21-ps13
Tssr69732	7	139774667 to 139774676	9	+	TSS region	transcription start site region 69732
Gm7380	7	139774714 to 139775179	465	+	pseudogene	predicted gene 7380
Mir6401	7	139779018 to 139779126	108	+	miRNA gene	microRNA 6401