Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:139318988-139958992

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96 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr69715 7 139330802 to 139330808 6 + TSS region transcription start site region 69715
Tssr2441 7 139339258 to 139339260 2 + TSS region transcription start site region 2441
Tssr69716 7 139347764 to 139347779 15 + TSS region transcription start site region 69716
Gm32571 7 139358080 to 139360900 2820 - lncRNA gene predicted gene, 32571
Tssr69717 7 139360282 to 139360288 6 + TSS region transcription start site region 69717
Tssr75443 7 139360891 to 139360931 40 - TSS region transcription start site region 75443
Gm46004 7 139386469 to 139388983 2514 - lncRNA gene predicted gene, 46004
Cpgi19877 7 139388507 to 139389852 1345 CpG island CpG island 19877
Tssr69718 7 139389072 to 139389161 89 + TSS region transcription start site region 69718
Inpp5a 7 139389109 to 139579652 190543 + protein coding gene inositol polyphosphate-5-phosphatase A
Tssr69719 7 139389325 to 139389334 9 + TSS region transcription start site region 69719
Tssr69720 7 139400505 to 139400528 23 + TSS region transcription start site region 69720
Tssr69721 7 139403747 to 139403765 18 + TSS region transcription start site region 69721
Tssr69722 7 139403785 to 139403804 19 + TSS region transcription start site region 69722
Tssr69723 7 139410295 to 139410299 4 + TSS region transcription start site region 69723
Lfibq7 7 139468137 to 139680398 212261 QTL liver fibrosis QTL 7
Tssr69724 7 139469714 to 139469725 11 + TSS region transcription start site region 69724
Tssr69725 7 139482390 to 139482392 2 + TSS region transcription start site region 69725
Tssr69726 7 139525727 to 139525730 3 + TSS region transcription start site region 69726
Tssr69727 7 139538111 to 139538139 28 + TSS region transcription start site region 69727
Gm33697 7 139543100 to 139551497 8397 - pseudogene predicted gene, 33697
Tssr69728 7 139552938 to 139552954 16 + TSS region transcription start site region 69728
Tssr69729 7 139553021 to 139553034 13 + TSS region transcription start site region 69729
Nkx6-2 7 139579376 to 139582797 3421 - protein coding gene NK6 homeobox 2
Cpgi19878 7 139580884 to 139583460 2576 CpG island CpG island 19878
Tssr75444 7 139582792 to 139582808 16 - TSS region transcription start site region 75444
Gm33031 7 139582975 to 139604901 21926 + lncRNA gene predicted gene, 33031
Cpgi19879 7 139584172 to 139585730 1558 CpG island CpG island 19879
Tssr69730 7 139586340 to 139586341 1 + TSS region transcription start site region 69730
Cfap46 7 139600951 to 139683817 82866 - protein coding gene cilia and flagella associated protein 46
Gm39111 7 139605890 to 139635046 29156 + lncRNA gene predicted gene, 39111
Tssr75445 7 139638988 to 139638992 4 - TSS region transcription start site region 75445
Gm4459 7 139659688 to 139660155 467 - pseudogene predicted gene 4459
Tssr75446 7 139660179 to 139660180 1 - TSS region transcription start site region 75446
Cpgi19880 7 139683629 to 139684160 531 CpG island CpG island 19880
Tssr75447 7 139683797 to 139683853 56 - TSS region transcription start site region 75447
Gm32680 7 139684054 to 139686742 2688 + lncRNA gene predicted gene, 32680
Tssr69731 7 139719356 to 139719359 3 + TSS region transcription start site region 69731
Rpl21-ps13 7 139719399 to 139719881 482 + pseudogene ribosomal protein L21-ps13
Tssr69732 7 139774667 to 139774676 9 + TSS region transcription start site region 69732
Gm7380 7 139774714 to 139775179 465 + pseudogene predicted gene 7380
Mir6401 7 139779018 to 139779126 108 + miRNA gene microRNA 6401
Tssr2442 7 139800012 to 139800016 4 + TSS region transcription start site region 2442
Cpgi19881 7 139833955 to 139834411 456 CpG island CpG island 19881
Tssr69733 7 139834091 to 139834102 11 + TSS region transcription start site region 69733
Tssr69734 7 139834148 to 139834167 19 + TSS region transcription start site region 69734
Adgra1 7 139834174 to 139878088 43914 + protein coding gene adhesion G protein-coupled receptor A1
Tssr69735 7 139834189 to 139834201 12 + TSS region transcription start site region 69735
Tssr69736 7 139834202 to 139834218 16 + TSS region transcription start site region 69736
Tssr69737 7 139834246 to 139834265 19 + TSS region transcription start site region 69737
Tssr69738 7 139834275 to 139834285 10 + TSS region transcription start site region 69738
Tssr69739 7 139834306 to 139834318 12 + TSS region transcription start site region 69739
Tssr69740 7 139834320 to 139834352 32 + TSS region transcription start site region 69740
Tssr69741 7 139834355 to 139834370 15 + TSS region transcription start site region 69741
Tssr69742 7 139834430 to 139834440 10 + TSS region transcription start site region 69742
Cpgi19882 7 139875001 to 139875541 540 CpG island CpG island 19882
Gm4974 7 139887477 to 139888351 874 - pseudogene predicted gene 4974
Cpgi19883 7 139894604 to 139895318 714 CpG island CpG island 19883
Kndc1 7 139894696 to 139941537 46841 + protein coding gene kinase non-catalytic C-lobe domain (KIND) containing 1
Tssr69743 7 139894783 to 139894854 71 + TSS region transcription start site region 69743
Tssr69744 7 139894857 to 139894866 9 + TSS region transcription start site region 69744
Tssr69745 7 139894879 to 139894884 5 + TSS region transcription start site region 69745
Tssr69746 7 139894918 to 139894985 67 + TSS region transcription start site region 69746
Tssr69747 7 139894987 to 139895048 61 + TSS region transcription start site region 69747
Tssr69748 7 139907117 to 139907121 4 + TSS region transcription start site region 69748
Tssr69749 7 139907398 to 139907403 5 + TSS region transcription start site region 69749
Cpgi19884 7 139914252 to 139914417 165 CpG island CpG island 19884
Tssr69750 7 139914614 to 139914629 15 + TSS region transcription start site region 69750
Tssr69751 7 139914654 to 139914665 11 + TSS region transcription start site region 69751
Tssr69752 7 139938051 to 139938099 48 + TSS region transcription start site region 69752
Cpgi19885 7 139943616 to 139945015 1399 CpG island CpG island 19885
Tssr69753 7 139943760 to 139943769 9 + TSS region transcription start site region 69753
Tssr69754 7 139943781 to 139943794 13 + TSS region transcription start site region 69754
Tssr69755 7 139943813 to 139943875 62 + TSS region transcription start site region 69755
Utf1 7 139943856 to 139945112 1256 + protein coding gene undifferentiated embryonic cell transcription factor 1
Tssr69756 7 139943878 to 139943915 37 + TSS region transcription start site region 69756
Tssr69757 7 139943968 to 139943975 7 + TSS region transcription start site region 69757
Tssr69758 7 139944513 to 139944536 23 + TSS region transcription start site region 69758
Tssr69759 7 139944546 to 139944554 8 + TSS region transcription start site region 69759
Tssr69760 7 139944579 to 139944586 7 + TSS region transcription start site region 69760
Tssr69761 7 139944613 to 139944623 10 + TSS region transcription start site region 69761
Tssr69762 7 139944648 to 139944655 7 + TSS region transcription start site region 69762
Tssr69763 7 139944666 to 139944679 13 + TSS region transcription start site region 69763
Tssr69764 7 139944691 to 139944710 19 + TSS region transcription start site region 69764
Tssr69765 7 139944747 to 139944763 16 + TSS region transcription start site region 69765
Cpgi19886 7 139950111 to 139950988 877 CpG island CpG island 19886
Tssr69766 7 139950387 to 139950424 37 + TSS region transcription start site region 69766
Gm16201 7 139950396 to 139978977 28581 + lncRNA gene predicted gene 16201
Tssr69767 7 139950434 to 139950446 12 + TSS region transcription start site region 69767
Tssr69768 7 139950696 to 139950717 21 + TSS region transcription start site region 69768
Tssr69769 7 139953896 to 139953900 4 + TSS region transcription start site region 69769
Gm2044 7 139957005 to 139958039 1034 - lincRNA gene predicted gene 2044
Mir7686 7 139957566 to 139957622 56 - miRNA gene microRNA 7686
Tssr75448 7 139957689 to 139957694 5 - TSS region transcription start site region 75448
Mir202 7 139957689 to 139957760 71 - miRNA gene microRNA 202
Tssr75449 7 139958037 to 139958040 3 - TSS region transcription start site region 75449