Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:139240727-139810730

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrrc27 7 139212988 to 139242979 29991 + protein coding gene leucine rich repeat containing 27
Cpgi19876 7 139247240 to 139249332 2092 CpG island CpG island 19876
Tssr69710 7 139248211 to 139248229 18 + TSS region transcription start site region 69710
Tssr69711 7 139248410 to 139248456 46 + TSS region transcription start site region 69711
Tssr69712 7 139248477 to 139248532 55 + TSS region transcription start site region 69712
Pwwp2b 7 139248482 to 139267253 18771 + protein coding gene PWWP domain containing 2B
Tssr69713 7 139254927 to 139254969 42 + TSS region transcription start site region 69713
Tssr69714 7 139264760 to 139264765 5 + TSS region transcription start site region 69714
Gm32486 7 139292817 to 139296865 4048 - lincRNA gene predicted gene, 32486
Tssr69715 7 139330802 to 139330808 6 + TSS region transcription start site region 69715
Tssr2441 7 139339258 to 139339260 2 + TSS region transcription start site region 2441
Tssr69716 7 139347764 to 139347779 15 + TSS region transcription start site region 69716
Gm32571 7 139358080 to 139360900 2820 - lncRNA gene predicted gene, 32571
Tssr69717 7 139360282 to 139360288 6 + TSS region transcription start site region 69717
Tssr75443 7 139360891 to 139360931 40 - TSS region transcription start site region 75443
Gm46004 7 139386469 to 139388983 2514 - lncRNA gene predicted gene, 46004
Cpgi19877 7 139388507 to 139389852 1345 CpG island CpG island 19877
Tssr69718 7 139389072 to 139389161 89 + TSS region transcription start site region 69718
Inpp5a 7 139389109 to 139579652 190543 + protein coding gene inositol polyphosphate-5-phosphatase A
Tssr69719 7 139389325 to 139389334 9 + TSS region transcription start site region 69719
Tssr69720 7 139400505 to 139400528 23 + TSS region transcription start site region 69720
Tssr69721 7 139403747 to 139403765 18 + TSS region transcription start site region 69721
Tssr69722 7 139403785 to 139403804 19 + TSS region transcription start site region 69722
Tssr69723 7 139410295 to 139410299 4 + TSS region transcription start site region 69723
Lfibq7 7 139468137 to 139680398 212261 QTL liver fibrosis QTL 7
Tssr69724 7 139469714 to 139469725 11 + TSS region transcription start site region 69724
Tssr69725 7 139482390 to 139482392 2 + TSS region transcription start site region 69725
Tssr69726 7 139525727 to 139525730 3 + TSS region transcription start site region 69726
Tssr69727 7 139538111 to 139538139 28 + TSS region transcription start site region 69727
Gm33697 7 139543100 to 139551497 8397 - pseudogene predicted gene, 33697
Tssr69728 7 139552938 to 139552954 16 + TSS region transcription start site region 69728
Tssr69729 7 139553021 to 139553034 13 + TSS region transcription start site region 69729
Nkx6-2 7 139579376 to 139582797 3421 - protein coding gene NK6 homeobox 2
Cpgi19878 7 139580884 to 139583460 2576 CpG island CpG island 19878
Tssr75444 7 139582792 to 139582808 16 - TSS region transcription start site region 75444
Gm33031 7 139582975 to 139604901 21926 + lncRNA gene predicted gene, 33031
Cpgi19879 7 139584172 to 139585730 1558 CpG island CpG island 19879
Tssr69730 7 139586340 to 139586341 1 + TSS region transcription start site region 69730
Cfap46 7 139600951 to 139683817 82866 - protein coding gene cilia and flagella associated protein 46
Gm39111 7 139605890 to 139635046 29156 + lncRNA gene predicted gene, 39111
Tssr75445 7 139638988 to 139638992 4 - TSS region transcription start site region 75445
Gm4459 7 139659688 to 139660155 467 - pseudogene predicted gene 4459
Tssr75446 7 139660179 to 139660180 1 - TSS region transcription start site region 75446
Cpgi19880 7 139683629 to 139684160 531 CpG island CpG island 19880
Tssr75447 7 139683797 to 139683853 56 - TSS region transcription start site region 75447
Gm32680 7 139684054 to 139686742 2688 + lncRNA gene predicted gene, 32680
Tssr69731 7 139719356 to 139719359 3 + TSS region transcription start site region 69731
Rpl21-ps13 7 139719399 to 139719881 482 + pseudogene ribosomal protein L21-ps13
Tssr69732 7 139774667 to 139774676 9 + TSS region transcription start site region 69732
Gm7380 7 139774714 to 139775179 465 + pseudogene predicted gene 7380
Mir6401 7 139779018 to 139779126 108 + miRNA gene microRNA 6401
Tssr2442 7 139800012 to 139800016 4 + TSS region transcription start site region 2442