Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:139234399-140204881

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239 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrrc27 7 139212988 to 139242979 29991 + protein coding gene leucine rich repeat containing 27
Gm32315 7 139232970 to 139235003 2033 - lncRNA gene predicted gene, 32315
Tssr75442 7 139234580 to 139234602 22 - TSS region transcription start site region 75442
Tssr69708 7 139235845 to 139235856 11 + TSS region transcription start site region 69708
Tssr69709 7 139235861 to 139235878 17 + TSS region transcription start site region 69709
Cpgi19876 7 139247240 to 139249332 2092 CpG island CpG island 19876
Tssr69710 7 139248211 to 139248229 18 + TSS region transcription start site region 69710
Tssr69711 7 139248410 to 139248456 46 + TSS region transcription start site region 69711
Tssr69712 7 139248477 to 139248532 55 + TSS region transcription start site region 69712
Pwwp2b 7 139248482 to 139267253 18771 + protein coding gene PWWP domain containing 2B
Tssr69713 7 139254927 to 139254969 42 + TSS region transcription start site region 69713
Tssr69714 7 139264760 to 139264765 5 + TSS region transcription start site region 69714
Gm32486 7 139292817 to 139296865 4048 - lincRNA gene predicted gene, 32486
Tssr69715 7 139330802 to 139330808 6 + TSS region transcription start site region 69715
Tssr2441 7 139339258 to 139339260 2 + TSS region transcription start site region 2441
Tssr69716 7 139347764 to 139347779 15 + TSS region transcription start site region 69716
Gm32571 7 139358080 to 139360900 2820 - lncRNA gene predicted gene, 32571
Tssr69717 7 139360282 to 139360288 6 + TSS region transcription start site region 69717
Tssr75443 7 139360891 to 139360931 40 - TSS region transcription start site region 75443
Gm46004 7 139386469 to 139388983 2514 - lncRNA gene predicted gene, 46004
Cpgi19877 7 139388507 to 139389852 1345 CpG island CpG island 19877
Tssr69718 7 139389072 to 139389161 89 + TSS region transcription start site region 69718
Inpp5a 7 139389109 to 139579652 190543 + protein coding gene inositol polyphosphate-5-phosphatase A
Tssr69719 7 139389325 to 139389334 9 + TSS region transcription start site region 69719
Tssr69720 7 139400505 to 139400528 23 + TSS region transcription start site region 69720
Tssr69721 7 139403747 to 139403765 18 + TSS region transcription start site region 69721
Tssr69722 7 139403785 to 139403804 19 + TSS region transcription start site region 69722
Tssr69723 7 139410295 to 139410299 4 + TSS region transcription start site region 69723
Lfibq7 7 139468137 to 139680398 212261 QTL liver fibrosis QTL 7
Tssr69724 7 139469714 to 139469725 11 + TSS region transcription start site region 69724
Tssr69725 7 139482390 to 139482392 2 + TSS region transcription start site region 69725
Tssr69726 7 139525727 to 139525730 3 + TSS region transcription start site region 69726
Tssr69727 7 139538111 to 139538139 28 + TSS region transcription start site region 69727
Gm33697 7 139543100 to 139551497 8397 - pseudogene predicted gene, 33697
Tssr69728 7 139552938 to 139552954 16 + TSS region transcription start site region 69728
Tssr69729 7 139553021 to 139553034 13 + TSS region transcription start site region 69729
Nkx6-2 7 139579376 to 139582797 3421 - protein coding gene NK6 homeobox 2
Cpgi19878 7 139580884 to 139583460 2576 CpG island CpG island 19878
Tssr75444 7 139582792 to 139582808 16 - TSS region transcription start site region 75444
Gm33031 7 139582975 to 139604901 21926 + lncRNA gene predicted gene, 33031
Cpgi19879 7 139584172 to 139585730 1558 CpG island CpG island 19879
Tssr69730 7 139586340 to 139586341 1 + TSS region transcription start site region 69730
Cfap46 7 139600951 to 139683817 82866 - protein coding gene cilia and flagella associated protein 46
Gm39111 7 139605890 to 139635046 29156 + lncRNA gene predicted gene, 39111
Tssr75445 7 139638988 to 139638992 4 - TSS region transcription start site region 75445
Gm4459 7 139659688 to 139660155 467 - pseudogene predicted gene 4459
Tssr75446 7 139660179 to 139660180 1 - TSS region transcription start site region 75446
Cpgi19880 7 139683629 to 139684160 531 CpG island CpG island 19880
Tssr75447 7 139683797 to 139683853 56 - TSS region transcription start site region 75447
Gm32680 7 139684054 to 139686742 2688 + lncRNA gene predicted gene, 32680
Tssr69731 7 139719356 to 139719359 3 + TSS region transcription start site region 69731
Rpl21-ps13 7 139719399 to 139719881 482 + pseudogene ribosomal protein L21-ps13
Tssr69732 7 139774667 to 139774676 9 + TSS region transcription start site region 69732
Gm7380 7 139774714 to 139775179 465 + pseudogene predicted gene 7380
Mir6401 7 139779018 to 139779126 108 + miRNA gene microRNA 6401
Tssr2442 7 139800012 to 139800016 4 + TSS region transcription start site region 2442
Cpgi19881 7 139833955 to 139834411 456 CpG island CpG island 19881
Tssr69733 7 139834091 to 139834102 11 + TSS region transcription start site region 69733
Tssr69734 7 139834148 to 139834167 19 + TSS region transcription start site region 69734
Adgra1 7 139834174 to 139878088 43914 + protein coding gene adhesion G protein-coupled receptor A1
Tssr69735 7 139834189 to 139834201 12 + TSS region transcription start site region 69735
Tssr69736 7 139834202 to 139834218 16 + TSS region transcription start site region 69736
Tssr69737 7 139834246 to 139834265 19 + TSS region transcription start site region 69737
Tssr69738 7 139834275 to 139834285 10 + TSS region transcription start site region 69738
Tssr69739 7 139834306 to 139834318 12 + TSS region transcription start site region 69739
Tssr69740 7 139834320 to 139834352 32 + TSS region transcription start site region 69740
Tssr69741 7 139834355 to 139834370 15 + TSS region transcription start site region 69741
Tssr69742 7 139834430 to 139834440 10 + TSS region transcription start site region 69742
Cpgi19882 7 139875001 to 139875541 540 CpG island CpG island 19882
Gm4974 7 139887477 to 139888351 874 - pseudogene predicted gene 4974
Cpgi19883 7 139894604 to 139895318 714 CpG island CpG island 19883
Kndc1 7 139894696 to 139941537 46841 + protein coding gene kinase non-catalytic C-lobe domain (KIND) containing 1
Tssr69743 7 139894783 to 139894854 71 + TSS region transcription start site region 69743
Tssr69744 7 139894857 to 139894866 9 + TSS region transcription start site region 69744
Tssr69745 7 139894879 to 139894884 5 + TSS region transcription start site region 69745
Tssr69746 7 139894918 to 139894985 67 + TSS region transcription start site region 69746
Tssr69747 7 139894987 to 139895048 61 + TSS region transcription start site region 69747
Tssr69748 7 139907117 to 139907121 4 + TSS region transcription start site region 69748
Tssr69749 7 139907398 to 139907403 5 + TSS region transcription start site region 69749
Cpgi19884 7 139914252 to 139914417 165 CpG island CpG island 19884
Tssr69750 7 139914614 to 139914629 15 + TSS region transcription start site region 69750
Tssr69751 7 139914654 to 139914665 11 + TSS region transcription start site region 69751
Tssr69752 7 139938051 to 139938099 48 + TSS region transcription start site region 69752
Cpgi19885 7 139943616 to 139945015 1399 CpG island CpG island 19885
Tssr69753 7 139943760 to 139943769 9 + TSS region transcription start site region 69753
Tssr69754 7 139943781 to 139943794 13 + TSS region transcription start site region 69754
Tssr69755 7 139943813 to 139943875 62 + TSS region transcription start site region 69755
Utf1 7 139943856 to 139945112 1256 + protein coding gene undifferentiated embryonic cell transcription factor 1
Tssr69756 7 139943878 to 139943915 37 + TSS region transcription start site region 69756
Tssr69757 7 139943968 to 139943975 7 + TSS region transcription start site region 69757
Tssr69758 7 139944513 to 139944536 23 + TSS region transcription start site region 69758
Tssr69759 7 139944546 to 139944554 8 + TSS region transcription start site region 69759
Tssr69760 7 139944579 to 139944586 7 + TSS region transcription start site region 69760
Tssr69761 7 139944613 to 139944623 10 + TSS region transcription start site region 69761
Tssr69762 7 139944648 to 139944655 7 + TSS region transcription start site region 69762
Tssr69763 7 139944666 to 139944679 13 + TSS region transcription start site region 69763
Tssr69764 7 139944691 to 139944710 19 + TSS region transcription start site region 69764
Tssr69765 7 139944747 to 139944763 16 + TSS region transcription start site region 69765
Cpgi19886 7 139950111 to 139950988 877 CpG island CpG island 19886
Tssr69766 7 139950387 to 139950424 37 + TSS region transcription start site region 69766
Gm16201 7 139950396 to 139978977 28581 + lncRNA gene predicted gene 16201
Tssr69767 7 139950434 to 139950446 12 + TSS region transcription start site region 69767
Tssr69768 7 139950696 to 139950717 21 + TSS region transcription start site region 69768
Tssr69769 7 139953896 to 139953900 4 + TSS region transcription start site region 69769
Gm2044 7 139957005 to 139958039 1034 - lincRNA gene predicted gene 2044
Mir7686 7 139957566 to 139957622 56 - miRNA gene microRNA 7686
Tssr75448 7 139957689 to 139957694 5 - TSS region transcription start site region 75448
Mir202 7 139957689 to 139957760 71 - miRNA gene microRNA 202
Tssr75449 7 139958037 to 139958040 3 - TSS region transcription start site region 75449
Tssr69770 7 139971710 to 139971726 16 + TSS region transcription start site region 69770
6430531B16Rik 7 139972303 to 139978755 6452 - protein coding gene RIKEN cDNA 6430531B16 gene
Tssr69771 7 139972373 to 139972382 9 + TSS region transcription start site region 69771
Tssr75450 7 139974349 to 139974358 9 - TSS region transcription start site region 75450
Tssr69772 7 139975736 to 139975765 29 + TSS region transcription start site region 69772
Cpgi19887 7 139978395 to 139978896 501 CpG island CpG island 19887
Tssr75451 7 139978670 to 139978681 11 - TSS region transcription start site region 75451
Tssr75452 7 139978687 to 139978698 11 - TSS region transcription start site region 75452
Tssr75453 7 139978709 to 139978747 38 - TSS region transcription start site region 75453
Tssr75454 7 139978748 to 139978768 20 - TSS region transcription start site region 75454
Tssr69773 7 139978931 to 139978956 25 + TSS region transcription start site region 69773
Adam8 7 139978932 to 139992562 13630 - protein coding gene a disintegrin and metallopeptidase domain 8
Tssr75455 7 139979508 to 139979520 12 - TSS region transcription start site region 75455
Tssr75456 7 139979997 to 139980034 37 - TSS region transcription start site region 75456
Tssr75457 7 139980409 to 139980417 8 - TSS region transcription start site region 75457
Tssr75458 7 139980773 to 139980776 3 - TSS region transcription start site region 75458
Tssr75459 7 139980861 to 139980869 8 - TSS region transcription start site region 75459
Tssr75460 7 139982816 to 139982832 16 - TSS region transcription start site region 75460
Tssr69774 7 139983302 to 139983342 40 + TSS region transcription start site region 69774
Tssr75461 7 139983348 to 139983368 20 - TSS region transcription start site region 75461
Tssr75462 7 139983374 to 139983394 20 - TSS region transcription start site region 75462
Tssr69775 7 139983833 to 139983883 50 + TSS region transcription start site region 69775
Tssr75463 7 139983863 to 139983878 15 - TSS region transcription start site region 75463
Tssr75464 7 139983879 to 139983897 18 - TSS region transcription start site region 75464
Tssr75465 7 139983948 to 139983972 24 - TSS region transcription start site region 75465
Tssr75466 7 139983979 to 139984001 22 - TSS region transcription start site region 75466
Tssr75467 7 139984559 to 139984568 9 - TSS region transcription start site region 75467
Tssr75468 7 139984607 to 139984620 13 - TSS region transcription start site region 75468
Tssr75469 7 139984763 to 139984832 69 - TSS region transcription start site region 75469
Tssr75470 7 139985376 to 139985399 23 - TSS region transcription start site region 75470
Tssr75471 7 139985400 to 139985416 16 - TSS region transcription start site region 75471
Tssr75472 7 139985424 to 139985434 10 - TSS region transcription start site region 75472
Tssr75473 7 139985874 to 139985885 11 - TSS region transcription start site region 75473
Tssr75474 7 139985903 to 139985915 12 - TSS region transcription start site region 75474
Mir7062 7 139986809 to 139986874 65 - miRNA gene microRNA 7062
Tssr75475 7 139986948 to 139986961 13 - TSS region transcription start site region 75475
Tssr75476 7 139988505 to 139988518 13 - TSS region transcription start site region 75476
Tssr75477 7 139988983 to 139989032 49 - TSS region transcription start site region 75477
Tssr75478 7 139989270 to 139989284 14 - TSS region transcription start site region 75478
Tssr75479 7 139989300 to 139989313 13 - TSS region transcription start site region 75479
Tssr75480 7 139989400 to 139989429 29 - TSS region transcription start site region 75480
Tssr75481 7 139990498 to 139990502 4 - TSS region transcription start site region 75481
Tssr75482 7 139991016 to 139991048 32 - TSS region transcription start site region 75482
Tssr75483 7 139991371 to 139991395 24 - TSS region transcription start site region 75483
Tssr75484 7 139992475 to 139992500 25 - TSS region transcription start site region 75484
Tssr75485 7 139992501 to 139992520 19 - TSS region transcription start site region 75485
Tssr75486 7 139992522 to 139992533 11 - TSS region transcription start site region 75486
Tssr75487 7 139992544 to 139992545 1 - TSS region transcription start site region 75487
Tssr69776 7 139992638 to 139992666 28 + TSS region transcription start site region 69776
Tubgcp2 7 139995955 to 140036669 40714 - protein coding gene tubulin, gamma complex associated protein 2
Tssr75488 7 139999089 to 139999103 14 - TSS region transcription start site region 75488
Cpgi19888 7 140035870 to 140037140 1270 CpG island CpG island 19888
Tssr75489 7 140036256 to 140036318 62 - TSS region transcription start site region 75489
Tssr75490 7 140036333 to 140036350 17 - TSS region transcription start site region 75490
Tssr75491 7 140036363 to 140036400 37 - TSS region transcription start site region 75491
Tssr69777 7 140036385 to 140036452 67 + TSS region transcription start site region 69777
Zfp511 7 140036391 to 140040602 4211 + protein coding gene zinc finger protein 511
Tssr75492 7 140036626 to 140036675 49 - TSS region transcription start site region 75492
Msx3 7 140046157 to 140049089 2932 - protein coding gene msh homeobox 3
Cpgi19889 7 140047666 to 140049666 2000 CpG island CpG island 19889
Tssr75493 7 140049083 to 140049089 6 - TSS region transcription start site region 75493
Tssr75494 7 140049148 to 140049180 32 - TSS region transcription start site region 75494
Tssr69778 7 140049266 to 140049302 36 + TSS region transcription start site region 69778
Tssr75495 7 140050892 to 140050903 11 - TSS region transcription start site region 75495
Cpgi19890 7 140057554 to 140058507 953 CpG island CpG island 19890
Cpgi19891 7 140061262 to 140061684 422 CpG island CpG island 19891
Caly 7 140069880 to 140082548 12668 - protein coding gene calcyon neuron-specific vesicular protein
Cpgi19892 7 140069972 to 140070723 751 CpG island CpG island 19892
Cpgi19893 7 140080829 to 140081465 636 CpG island CpG island 19893
Cpgi19894 7 140082179 to 140082548 369 CpG island CpG island 19894
Tssr75496 7 140082199 to 140082201 2 - TSS region transcription start site region 75496
Tssr75497 7 140082222 to 140082236 14 - TSS region transcription start site region 75497
Tssr75498 7 140082246 to 140082284 38 - TSS region transcription start site region 75498
Tssr75499 7 140082489 to 140082556 67 - TSS region transcription start site region 75499
Tssr75500 7 140082559 to 140082570 11 - TSS region transcription start site region 75500
Tssr69779 7 140090930 to 140090931 1 + TSS region transcription start site region 69779
Tssr2443 7 140093262 to 140093274 12 + TSS region transcription start site region 2443
Tssr69780 7 140093388 to 140093402 14 + TSS region transcription start site region 69780
Prap1 7 140093395 to 140097200 3805 + protein coding gene proline-rich acidic protein 1
Tssr69781 7 140093404 to 140093415 11 + TSS region transcription start site region 69781
Tssr69782 7 140095027 to 140095041 14 + TSS region transcription start site region 69782
Tssr69783 7 140096720 to 140096731 11 + TSS region transcription start site region 69783
Tssr2444 7 140096732 to 140096737 5 + TSS region transcription start site region 2444
Fuom 7 140096770 to 140102441 5671 - protein coding gene fucose mutarotase
Tssr69784 7 140096964 to 140096978 14 + TSS region transcription start site region 69784
Tssr69785 7 140097053 to 140097080 27 + TSS region transcription start site region 69785
Tssr69786 7 140097091 to 140097119 28 + TSS region transcription start site region 69786
Tssr69787 7 140097121 to 140097152 31 + TSS region transcription start site region 69787
Tssr75501 7 140102004 to 140102021 17 - TSS region transcription start site region 75501
Cpgi19895 7 140102090 to 140102480 390 CpG island CpG island 19895
Tssr75502 7 140102326 to 140102357 31 - TSS region transcription start site region 75502