Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:138830964-138954675

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr69684 7 138834901 to 138834902 1 + TSS region transcription start site region 69684
Mapk1ip1 7 138835818 to 138846267 10449 - protein coding gene mitogen-activated protein kinase 1 interacting protein 1
Cpgi19867 7 138845675 to 138847616 1941 CpG island CpG island 19867
Tssr75432 7 138846110 to 138846131 21 - TSS region transcription start site region 75432
Tssr75433 7 138846167 to 138846199 32 - TSS region transcription start site region 75433
Tssr75434 7 138846202 to 138846293 91 - TSS region transcription start site region 75434
Tssr69685 7 138846335 to 138846371 36 + TSS region transcription start site region 69685
Tssr69686 7 138846381 to 138846429 48 + TSS region transcription start site region 69686
Ppp2r2d 7 138846384 to 138883057 36673 + protein coding gene protein phosphatase 2, regulatory subunit B, delta
Tssr69687 7 138846579 to 138846623 44 + TSS region transcription start site region 69687
Tssr69688 7 138846634 to 138846660 26 + TSS region transcription start site region 69688
Tssr69689 7 138848476 to 138848490 14 + TSS region transcription start site region 69689
Tssr69690 7 138848510 to 138848533 23 + TSS region transcription start site region 69690
Tssr75435 7 138850032 to 138850057 25 - TSS region transcription start site region 75435
6030427F01Rik 7 138884286 to 138885980 1694 unclassified gene RIKEN cDNA 6030427F01 gene
Tssr75436 7 138885977 to 138885982 5 - TSS region transcription start site region 75436
Bnip3 7 138890836 to 138909506 18670 - protein coding gene BCL2/adenovirus E1B interacting protein 3
Gm45507 7 138890964 to 138894675 3711 + antisense lncRNA gene predicted gene 45507
Gm18258 7 138899388 to 138900239 851 + pseudogene predicted gene, 18258
Cpgi19868 7 138909091 to 138910056 965 CpG island CpG island 19868
Tssr75437 7 138909422 to 138909431 9 - TSS region transcription start site region 75437
Tssr75438 7 138909448 to 138909491 43 - TSS region transcription start site region 75438
Tssr75439 7 138909492 to 138909513 21 - TSS region transcription start site region 75439
Gm9358 7 138914388 to 138915314 926 + pseudogene predicted gene 9358
Cpgi19869 7 138919478 to 138919925 447 CpG island CpG island 19869
Gm45668 7 138929724 to 138930216 492 - pseudogene predicted gene 45668
Cpgi19870 7 138939355 to 138939510 155 CpG island CpG island 19870
Cpgi19871 7 138940302 to 138941729 1427 CpG island CpG island 19871
Tssr69691 7 138940363 to 138940396 33 + TSS region transcription start site region 69691
Tssr69692 7 138940717 to 138940744 27 + TSS region transcription start site region 69692
Jakmip3 7 138940730 to 139083976 143246 + protein coding gene janus kinase and microtubule interacting protein 3