Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:137790272-139040418

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D7Mit1010 7 137933176 to 137933259 83 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 1010
Gm5650 7 138061956 to 138062507 551 + pseudogene predicted gene 5650
Gm30395 7 138097508 to 138123578 26070 - lncRNA gene predicted gene, 30395
Gm25798 7 138101433 to 138101539 106 - snRNA gene predicted gene, 25798
Tcerg1l 7 138208974 to 138397730 188756 - protein coding gene transcription elongation regulator 1-like
D7Mit334 7 138289643 to 138289814 171 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 334
Cpgi19864 7 138396902 to 138398772 1870 CpG island CpG island 19864
Tssr75430 7 138397626 to 138397643 17 - TSS region transcription start site region 75430
Tssr75431 7 138397704 to 138397786 82 - TSS region transcription start site region 75431
Gm45686 7 138413614 to 138421765 8151 + lincRNA gene predicted gene 45686
D7Mit242 7 138415272 to 138415418 146 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 242
Gm30751 7 138486659 to 138608418 121759 - lncRNA gene predicted gene, 30751
4930543N07Rik 7 138554242 to 138566994 12752 + lincRNA gene RIKEN cDNA 4930543N07 gene
Tssr69683 7 138555222 to 138555225 3 + TSS region transcription start site region 69683
2900001A22Rik 7 138561884 to 138562294 410 unclassified gene RIKEN cDNA 2900001A22 gene
Gm30808 7 138700975 to 138703253 2278 + lincRNA gene predicted gene, 30808
Gm30874 7 138733527 to 138828897 95370 - lncRNA gene predicted gene, 30874
D7Mit292 7 138750928 to 138751043 115 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 292
Gm45506 7 138820745 to 138821024 279 + pseudogene predicted gene 45506
Cpgi19865 7 138829543 to 138829892 349 CpG island CpG island 19865
Cpgi19866 7 138830154 to 138830581 427 CpG island CpG island 19866
Tssr69684 7 138834901 to 138834902 1 + TSS region transcription start site region 69684
Mapk1ip1 7 138835818 to 138846267 10449 - protein coding gene mitogen-activated protein kinase 1 interacting protein 1
Cpgi19867 7 138845675 to 138847616 1941 CpG island CpG island 19867
Tssr75432 7 138846110 to 138846131 21 - TSS region transcription start site region 75432
Tssr75433 7 138846167 to 138846199 32 - TSS region transcription start site region 75433
Tssr75434 7 138846202 to 138846293 91 - TSS region transcription start site region 75434
Tssr69685 7 138846335 to 138846371 36 + TSS region transcription start site region 69685
Tssr69686 7 138846381 to 138846429 48 + TSS region transcription start site region 69686
Ppp2r2d 7 138846384 to 138883057 36673 + protein coding gene protein phosphatase 2, regulatory subunit B, delta
Tssr69687 7 138846579 to 138846623 44 + TSS region transcription start site region 69687
Tssr69688 7 138846634 to 138846660 26 + TSS region transcription start site region 69688
Tssr69689 7 138848476 to 138848490 14 + TSS region transcription start site region 69689
Tssr69690 7 138848510 to 138848533 23 + TSS region transcription start site region 69690
Tssr75435 7 138850032 to 138850057 25 - TSS region transcription start site region 75435
6030427F01Rik 7 138884286 to 138885980 1694 unclassified gene RIKEN cDNA 6030427F01 gene
Tssr75436 7 138885977 to 138885982 5 - TSS region transcription start site region 75436
Bnip3 7 138890836 to 138909506 18670 - protein coding gene BCL2/adenovirus E1B interacting protein 3
Gm45507 7 138890964 to 138894675 3711 + antisense lncRNA gene predicted gene 45507
Gm18258 7 138899388 to 138900239 851 + pseudogene predicted gene, 18258
Cpgi19868 7 138909091 to 138910056 965 CpG island CpG island 19868
Tssr75437 7 138909422 to 138909431 9 - TSS region transcription start site region 75437
Tssr75438 7 138909448 to 138909491 43 - TSS region transcription start site region 75438
Tssr75439 7 138909492 to 138909513 21 - TSS region transcription start site region 75439
Gm9358 7 138914388 to 138915314 926 + pseudogene predicted gene 9358
Cpgi19869 7 138919478 to 138919925 447 CpG island CpG island 19869
Gm45668 7 138929724 to 138930216 492 - pseudogene predicted gene 45668
Cpgi19870 7 138939355 to 138939510 155 CpG island CpG island 19870
Cpgi19871 7 138940302 to 138941729 1427 CpG island CpG island 19871
Tssr69691 7 138940363 to 138940396 33 + TSS region transcription start site region 69691
Tssr69692 7 138940717 to 138940744 27 + TSS region transcription start site region 69692
Jakmip3 7 138940730 to 139083976 143246 + protein coding gene janus kinase and microtubule interacting protein 3
Gm45613 7 139019160 to 139020999 1839 - antisense lncRNA gene predicted gene 45613
Cpgi19872 7 139020872 to 139021274 402 CpG island CpG island 19872
Tssr75440 7 139020943 to 139020957 14 - TSS region transcription start site region 75440