Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:137291433-138911539

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96 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ebf3 7 137193673 to 137314445 120772 - protein coding gene early B cell factor 3
Tssr75408 7 137303225 to 137303230 5 - TSS region transcription start site region 75408
Tssr75409 7 137304395 to 137304399 4 - TSS region transcription start site region 75409
Tssr75410 7 137304595 to 137304615 20 - TSS region transcription start site region 75410
Cpgi19856 7 137309041 to 137310748 1707 CpG island CpG island 19856
Tssr75411 7 137311001 to 137311006 5 - TSS region transcription start site region 75411
Cpgi19857 7 137312907 to 137315666 2759 CpG island CpG island 19857
Tssr75412 7 137313647 to 137313658 11 - TSS region transcription start site region 75412
Tssr75413 7 137313873 to 137313882 9 - TSS region transcription start site region 75413
Tssr75414 7 137314193 to 137314201 8 - TSS region transcription start site region 75414
Tssr75415 7 137314223 to 137314230 7 - TSS region transcription start site region 75415
Tssr2437 7 137314251 to 137314254 3 - TSS region transcription start site region 2437
Tssr75416 7 137314259 to 137314266 7 - TSS region transcription start site region 75416
Tssr75417 7 137314274 to 137314289 15 - TSS region transcription start site region 75417
Tssr75418 7 137314297 to 137314327 30 - TSS region transcription start site region 75418
Tssr75419 7 137314368 to 137314379 11 - TSS region transcription start site region 75419
Tssr75420 7 137314394 to 137314445 51 - TSS region transcription start site region 75420
Tssr75421 7 137314833 to 137314842 9 - TSS region transcription start site region 75421
Tssr69674 7 137316899 to 137316904 5 + TSS region transcription start site region 69674
Cpgi19858 7 137317131 to 137317799 668 CpG island CpG island 19858
Cpgi19859 7 137318887 to 137319507 620 CpG island CpG island 19859
Cpgi19860 7 137321125 to 137323465 2340 CpG island CpG island 19860
Tssr75422 7 137322760 to 137322785 25 - TSS region transcription start site region 75422
Gm45514 7 137335741 to 137336429 688 - pseudogene predicted gene 45514
Tssr69675 7 137370672 to 137370684 12 + TSS region transcription start site region 69675
Gm17841 7 137372257 to 137373224 967 + pseudogene predicted gene, 17841
9430038I01Rik 7 137375574 to 137410762 35188 - protein coding gene RIKEN cDNA 9430038I01 gene
Cpgi19861 7 137410343 to 137411359 1016 CpG island CpG island 19861
Tssr75423 7 137410698 to 137410705 7 - TSS region transcription start site region 75423
Tssr75424 7 137410717 to 137410761 44 - TSS region transcription start site region 75424
Tssr75425 7 137410928 to 137410938 10 - TSS region transcription start site region 75425
Tssr75426 7 137410949 to 137410970 21 - TSS region transcription start site region 75426
Tssr75427 7 137410971 to 137410983 12 - TSS region transcription start site region 75427
Tssr69676 7 137411128 to 137411169 41 + TSS region transcription start site region 69676
Tssr69677 7 137429793 to 137429797 4 + TSS region transcription start site region 69677
Cpgi19862 7 137437352 to 137438313 961 CpG island CpG island 19862
Tssr69678 7 137437571 to 137437580 9 + TSS region transcription start site region 69678
Tssr69679 7 137437582 to 137437589 7 + TSS region transcription start site region 69679
Tssr69680 7 137437591 to 137437649 58 + TSS region transcription start site region 69680
Glrx3 7 137437614 to 137468594 30980 + protein coding gene glutaredoxin 3
Tssr69681 7 137437651 to 137437672 21 + TSS region transcription start site region 69681
Tssr69682 7 137437939 to 137437956 17 + TSS region transcription start site region 69682
D7Mit361 7 137439889 to 137440013 124 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 361
Gm39110 7 137469262 to 137472179 2917 + lncRNA gene predicted gene, 39110
Cpgi19863 7 137478143 to 137478673 530 CpG island CpG island 19863
Gm45397 7 137557112 to 137564588 7476 - lincRNA gene predicted gene 45397
Tssr75428 7 137564606 to 137564620 14 - TSS region transcription start site region 75428
Tssr75429 7 137564697 to 137564706 9 - TSS region transcription start site region 75429
4930570E01Rik 7 137630516 to 137654033 23517 - lncRNA gene RIKEN cDNA 4930570E01 gene
Gm45683 7 137649089 to 137650335 1246 + unclassified gene predicted gene 45683
Gm45682 7 137734266 to 137737959 3693 + lincRNA gene predicted gene 45682
Tssr2438 7 137789768 to 137789774 6 + TSS region transcription start site region 2438
D7Mit1010 7 137933176 to 137933259 83 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 1010
Gm5650 7 138061956 to 138062507 551 + pseudogene predicted gene 5650
Gm30395 7 138097508 to 138123578 26070 - lncRNA gene predicted gene, 30395
Gm25798 7 138101433 to 138101539 106 - snRNA gene predicted gene, 25798
Tcerg1l 7 138208974 to 138397730 188756 - protein coding gene transcription elongation regulator 1-like
D7Mit334 7 138289643 to 138289814 171 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 334
Cpgi19864 7 138396902 to 138398772 1870 CpG island CpG island 19864
Tssr75430 7 138397626 to 138397643 17 - TSS region transcription start site region 75430
Tssr75431 7 138397704 to 138397786 82 - TSS region transcription start site region 75431
Gm45686 7 138413614 to 138421765 8151 + lincRNA gene predicted gene 45686
D7Mit242 7 138415272 to 138415418 146 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 242
Gm30751 7 138486659 to 138608418 121759 - lncRNA gene predicted gene, 30751
4930543N07Rik 7 138554242 to 138566994 12752 + lincRNA gene RIKEN cDNA 4930543N07 gene
Tssr69683 7 138555222 to 138555225 3 + TSS region transcription start site region 69683
2900001A22Rik 7 138561884 to 138562294 410 unclassified gene RIKEN cDNA 2900001A22 gene
Gm30808 7 138700975 to 138703253 2278 + lincRNA gene predicted gene, 30808
Gm30874 7 138733527 to 138828897 95370 - lncRNA gene predicted gene, 30874
D7Mit292 7 138750928 to 138751043 115 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 292
Gm45506 7 138820745 to 138821024 279 + pseudogene predicted gene 45506
Cpgi19865 7 138829543 to 138829892 349 CpG island CpG island 19865
Cpgi19866 7 138830154 to 138830581 427 CpG island CpG island 19866
Tssr69684 7 138834901 to 138834902 1 + TSS region transcription start site region 69684
Mapk1ip1 7 138835818 to 138846267 10449 - protein coding gene mitogen-activated protein kinase 1 interacting protein 1
Cpgi19867 7 138845675 to 138847616 1941 CpG island CpG island 19867
Tssr75432 7 138846110 to 138846131 21 - TSS region transcription start site region 75432
Tssr75433 7 138846167 to 138846199 32 - TSS region transcription start site region 75433
Tssr75434 7 138846202 to 138846293 91 - TSS region transcription start site region 75434
Tssr69685 7 138846335 to 138846371 36 + TSS region transcription start site region 69685
Tssr69686 7 138846381 to 138846429 48 + TSS region transcription start site region 69686
Ppp2r2d 7 138846384 to 138883057 36673 + protein coding gene protein phosphatase 2, regulatory subunit B, delta
Tssr69687 7 138846579 to 138846623 44 + TSS region transcription start site region 69687
Tssr69688 7 138846634 to 138846660 26 + TSS region transcription start site region 69688
Tssr69689 7 138848476 to 138848490 14 + TSS region transcription start site region 69689
Tssr69690 7 138848510 to 138848533 23 + TSS region transcription start site region 69690
Tssr75435 7 138850032 to 138850057 25 - TSS region transcription start site region 75435
6030427F01Rik 7 138884286 to 138885980 1694 unclassified gene RIKEN cDNA 6030427F01 gene
Tssr75436 7 138885977 to 138885982 5 - TSS region transcription start site region 75436
Bnip3 7 138890836 to 138909506 18670 - protein coding gene BCL2/adenovirus E1B interacting protein 3
Gm45507 7 138890964 to 138894675 3711 + antisense lncRNA gene predicted gene 45507
Gm18258 7 138899388 to 138900239 851 + pseudogene predicted gene, 18258
Cpgi19868 7 138909091 to 138910056 965 CpG island CpG island 19868
Tssr75437 7 138909422 to 138909431 9 - TSS region transcription start site region 75437
Tssr75438 7 138909448 to 138909491 43 - TSS region transcription start site region 75438
Tssr75439 7 138909492 to 138909513 21 - TSS region transcription start site region 75439