Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:136885546-137301416

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi19853 7 136894243 to 136894600 357 CpG island CpG island 19853
Mgmt 7 136894468 to 137128193 233725 + protein coding gene O-6-methylguanine-DNA methyltransferase
Tssr69671 7 136894575 to 136894597 22 + TSS region transcription start site region 69671
Tssr69672 7 136894598 to 136894639 41 + TSS region transcription start site region 69672
Gm45280 7 136920941 to 136923492 2551 + unclassified gene predicted gene 45280
D7Mit209 7 137018214 to 137018359 145 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 209
Gm39108 7 137090546 to 137096416 5870 - lncRNA gene predicted gene, 39108
4933409L14Rik 7 137123803 to 137125706 1903 unclassified gene RIKEN cDNA 4933409L14 gene
Tssr75397 7 137125700 to 137125712 12 - TSS region transcription start site region 75397
Tssr75398 7 137125723 to 137125749 26 - TSS region transcription start site region 75398
Tssr75399 7 137125752 to 137125777 25 - TSS region transcription start site region 75399
Tssr69673 7 137129258 to 137129263 5 + TSS region transcription start site region 69673
Gm39109 7 137132561 to 137137204 4643 + lncRNA gene predicted gene, 39109
Gm30061 7 137145814 to 137149465 3651 + lncRNA gene predicted gene, 30061
Gm45499 7 137167820 to 137168099 279 + pseudogene predicted gene 45499
D7Mit333 7 137176717 to 137176826 109 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 333
Ebf3 7 137193673 to 137314445 120772 - protein coding gene early B cell factor 3
Tssr75400 7 137194609 to 137194666 57 - TSS region transcription start site region 75400
Tssr75401 7 137194693 to 137194706 13 - TSS region transcription start site region 75401
Tssr75402 7 137194854 to 137194867 13 - TSS region transcription start site region 75402
Tssr75403 7 137194870 to 137194891 21 - TSS region transcription start site region 75403
Tssr75404 7 137195798 to 137195803 5 - TSS region transcription start site region 75404
Tssr75405 7 137196363 to 137196370 7 - TSS region transcription start site region 75405
Gm45278 7 137198488 to 137201722 3234 + antisense lncRNA gene predicted gene 45278
Tssr75406 7 137199236 to 137199250 14 - TSS region transcription start site region 75406
Tssr75407 7 137231551 to 137231556 5 - TSS region transcription start site region 75407
Gm10578 7 137234683 to 137242609 7926 + antisense lncRNA gene predicted gene 10578
Cpgi19854 7 137253441 to 137253664 223 CpG island CpG island 19854
Cpgi19855 7 137266668 to 137266868 200 CpG island CpG island 19855