Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:135799089-139500335

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230 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr2433 7 135806808 to 135806814 6 - TSS region transcription start site region 2433
Gm36431 7 135816461 to 135827559 11098 + lincRNA gene predicted gene, 36431
Gm45241 7 135850708 to 135854448 3740 - lincRNA gene predicted gene 45241
Cpgi19851 7 135853294 to 135854055 761 CpG island CpG island 19851
6330420H09Rik 7 135853682 to 135855710 2028 + lincRNA gene RIKEN cDNA 6330420H09 gene
Tssr69665 7 135854102 to 135854122 20 + TSS region transcription start site region 69665
Gm45440 7 135892815 to 135894469 1654 + unclassified gene predicted gene 45440
Gm45439 7 135907456 to 135907814 358 - pseudogene predicted gene 45439
Tssr69666 7 135952730 to 135952737 7 + TSS region transcription start site region 69666
Gm9341 7 135952798 to 135953783 985 + pseudogene predicted gene 9341
Tssr69667 7 136048065 to 136048070 5 + TSS region transcription start site region 69667
D7Mit290 7 136119264 to 136119383 119 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 290
D7Mit45 7 136148344 to 136148490 146 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 45
Gm36675 7 136153158 to 136160317 7159 + lncRNA gene predicted gene, 36675
Gm36737 7 136167086 to 136173296 6210 - lincRNA gene predicted gene, 36737
Cpgi19852 7 136209575 to 136209874 299 CpG island CpG island 19852
Tssr69668 7 136268318 to 136268337 19 + TSS region transcription start site region 69668
C030029H02Rik 7 136268324 to 136318511 50187 + lincRNA gene RIKEN cDNA C030029H02 gene
Tssr2434 7 136268342 to 136268356 14 + TSS region transcription start site region 2434
Tssr69669 7 136268877 to 136268886 9 + TSS region transcription start site region 69669
Gm45426 7 136288656 to 136292327 3671 + unclassified gene predicted gene 45426
D7Mit139 7 136298794 to 136298935 141 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 139
Tssr2435 7 136305096 to 136305097 1 + TSS region transcription start site region 2435
C230079O03Rik 7 136332216 to 136349415 17199 - lincRNA gene RIKEN cDNA C230079O03 gene
Tssr69670 7 136353358 to 136353369 11 + TSS region transcription start site region 69670
Gm36849 7 136353364 to 136356270 2906 + lincRNA gene predicted gene, 36849
Gm29872 7 136373631 to 136390415 16784 - lncRNA gene predicted gene, 29872
D7Mit10 7 136391134 to 136391318 184 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 10
Tssr2436 7 136465510 to 136465512 2 + TSS region transcription start site region 2436
Gm29931 7 136496225 to 136503554 7329 + lncRNA gene predicted gene, 29931
Gm24444 7 136509026 to 136509333 307 - unclassified non-coding RNA gene predicted gene, 24444
D7Mit109 7 136515063 to 136515171 108 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 109
Stheal7 7 136530844 to 136531040 196 QTL soft tissue heal 7
D7Mit12 7 136530844 to 136531040 196 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 12
D7Mit291 7 136561133 to 136561304 171 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 291
Gm5904 7 136657209 to 136658073 864 + pseudogene predicted gene 5904
Gm6249 7 136667955 to 136710604 42649 - lincRNA gene predicted gene 6249
Gm29978 7 136677091 to 136680444 3353 - lncRNA gene predicted gene, 29978
Gm9347 7 136810909 to 136812515 1606 + pseudogene predicted gene 9347
Cpgi19853 7 136894243 to 136894600 357 CpG island CpG island 19853
Mgmt 7 136894468 to 137128193 233725 + protein coding gene O-6-methylguanine-DNA methyltransferase
Tssr69671 7 136894575 to 136894597 22 + TSS region transcription start site region 69671
Tssr69672 7 136894598 to 136894639 41 + TSS region transcription start site region 69672
Gm45280 7 136920941 to 136923492 2551 + unclassified gene predicted gene 45280
D7Mit209 7 137018214 to 137018359 145 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 209
Gm39108 7 137090546 to 137096416 5870 - lncRNA gene predicted gene, 39108
4933409L14Rik 7 137123803 to 137125706 1903 unclassified gene RIKEN cDNA 4933409L14 gene
Tssr75397 7 137125700 to 137125712 12 - TSS region transcription start site region 75397
Tssr75398 7 137125723 to 137125749 26 - TSS region transcription start site region 75398
Tssr75399 7 137125752 to 137125777 25 - TSS region transcription start site region 75399
Tssr69673 7 137129258 to 137129263 5 + TSS region transcription start site region 69673
Gm39109 7 137132561 to 137137204 4643 + lncRNA gene predicted gene, 39109
Gm30061 7 137145814 to 137149465 3651 + lncRNA gene predicted gene, 30061
Gm45499 7 137167820 to 137168099 279 + pseudogene predicted gene 45499
D7Mit333 7 137176717 to 137176826 109 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 333
Ebf3 7 137193673 to 137314445 120772 - protein coding gene early B cell factor 3
Tssr75400 7 137194609 to 137194666 57 - TSS region transcription start site region 75400
Tssr75401 7 137194693 to 137194706 13 - TSS region transcription start site region 75401
Tssr75402 7 137194854 to 137194867 13 - TSS region transcription start site region 75402
Tssr75403 7 137194870 to 137194891 21 - TSS region transcription start site region 75403
Tssr75404 7 137195798 to 137195803 5 - TSS region transcription start site region 75404
Tssr75405 7 137196363 to 137196370 7 - TSS region transcription start site region 75405
Gm45278 7 137198488 to 137201722 3234 + antisense lncRNA gene predicted gene 45278
Tssr75406 7 137199236 to 137199250 14 - TSS region transcription start site region 75406
Tssr75407 7 137231551 to 137231556 5 - TSS region transcription start site region 75407
Gm10578 7 137234683 to 137242609 7926 + antisense lncRNA gene predicted gene 10578
Cpgi19854 7 137253441 to 137253664 223 CpG island CpG island 19854
Cpgi19855 7 137266668 to 137266868 200 CpG island CpG island 19855
Tssr75408 7 137303225 to 137303230 5 - TSS region transcription start site region 75408
Tssr75409 7 137304395 to 137304399 4 - TSS region transcription start site region 75409
Tssr75410 7 137304595 to 137304615 20 - TSS region transcription start site region 75410
Cpgi19856 7 137309041 to 137310748 1707 CpG island CpG island 19856
Tssr75411 7 137311001 to 137311006 5 - TSS region transcription start site region 75411
Cpgi19857 7 137312907 to 137315666 2759 CpG island CpG island 19857
Tssr75412 7 137313647 to 137313658 11 - TSS region transcription start site region 75412
Tssr75413 7 137313873 to 137313882 9 - TSS region transcription start site region 75413
Tssr75414 7 137314193 to 137314201 8 - TSS region transcription start site region 75414
Tssr75415 7 137314223 to 137314230 7 - TSS region transcription start site region 75415
Tssr2437 7 137314251 to 137314254 3 - TSS region transcription start site region 2437
Tssr75416 7 137314259 to 137314266 7 - TSS region transcription start site region 75416
Tssr75417 7 137314274 to 137314289 15 - TSS region transcription start site region 75417
Tssr75418 7 137314297 to 137314327 30 - TSS region transcription start site region 75418
Tssr75419 7 137314368 to 137314379 11 - TSS region transcription start site region 75419
Tssr75420 7 137314394 to 137314445 51 - TSS region transcription start site region 75420
Tssr75421 7 137314833 to 137314842 9 - TSS region transcription start site region 75421
Tssr69674 7 137316899 to 137316904 5 + TSS region transcription start site region 69674
Cpgi19858 7 137317131 to 137317799 668 CpG island CpG island 19858
Cpgi19859 7 137318887 to 137319507 620 CpG island CpG island 19859
Cpgi19860 7 137321125 to 137323465 2340 CpG island CpG island 19860
Tssr75422 7 137322760 to 137322785 25 - TSS region transcription start site region 75422
Gm45514 7 137335741 to 137336429 688 - pseudogene predicted gene 45514
Tssr69675 7 137370672 to 137370684 12 + TSS region transcription start site region 69675
Gm17841 7 137372257 to 137373224 967 + pseudogene predicted gene, 17841
9430038I01Rik 7 137375574 to 137410762 35188 - protein coding gene RIKEN cDNA 9430038I01 gene
Cpgi19861 7 137410343 to 137411359 1016 CpG island CpG island 19861
Tssr75423 7 137410698 to 137410705 7 - TSS region transcription start site region 75423
Tssr75424 7 137410717 to 137410761 44 - TSS region transcription start site region 75424
Tssr75425 7 137410928 to 137410938 10 - TSS region transcription start site region 75425
Tssr75426 7 137410949 to 137410970 21 - TSS region transcription start site region 75426
Tssr75427 7 137410971 to 137410983 12 - TSS region transcription start site region 75427
Tssr69676 7 137411128 to 137411169 41 + TSS region transcription start site region 69676
Tssr69677 7 137429793 to 137429797 4 + TSS region transcription start site region 69677
Cpgi19862 7 137437352 to 137438313 961 CpG island CpG island 19862
Tssr69678 7 137437571 to 137437580 9 + TSS region transcription start site region 69678
Tssr69679 7 137437582 to 137437589 7 + TSS region transcription start site region 69679
Tssr69680 7 137437591 to 137437649 58 + TSS region transcription start site region 69680
Glrx3 7 137437614 to 137468594 30980 + protein coding gene glutaredoxin 3
Tssr69681 7 137437651 to 137437672 21 + TSS region transcription start site region 69681
Tssr69682 7 137437939 to 137437956 17 + TSS region transcription start site region 69682
D7Mit361 7 137439889 to 137440013 124 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 361
Gm39110 7 137469262 to 137472179 2917 + lncRNA gene predicted gene, 39110
Cpgi19863 7 137478143 to 137478673 530 CpG island CpG island 19863
Gm45397 7 137557112 to 137564588 7476 - lincRNA gene predicted gene 45397
Tssr75428 7 137564606 to 137564620 14 - TSS region transcription start site region 75428
Tssr75429 7 137564697 to 137564706 9 - TSS region transcription start site region 75429
4930570E01Rik 7 137630516 to 137654033 23517 - lncRNA gene RIKEN cDNA 4930570E01 gene
Gm45683 7 137649089 to 137650335 1246 + unclassified gene predicted gene 45683
Gm45682 7 137734266 to 137737959 3693 + lincRNA gene predicted gene 45682
Tssr2438 7 137789768 to 137789774 6 + TSS region transcription start site region 2438
D7Mit1010 7 137933176 to 137933259 83 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 1010
Gm5650 7 138061956 to 138062507 551 + pseudogene predicted gene 5650
Gm30395 7 138097508 to 138123578 26070 - lncRNA gene predicted gene, 30395
Gm25798 7 138101433 to 138101539 106 - snRNA gene predicted gene, 25798
Tcerg1l 7 138208974 to 138397730 188756 - protein coding gene transcription elongation regulator 1-like
D7Mit334 7 138289643 to 138289814 171 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 334
Cpgi19864 7 138396902 to 138398772 1870 CpG island CpG island 19864
Tssr75430 7 138397626 to 138397643 17 - TSS region transcription start site region 75430
Tssr75431 7 138397704 to 138397786 82 - TSS region transcription start site region 75431
Gm45686 7 138413614 to 138421765 8151 + lincRNA gene predicted gene 45686
D7Mit242 7 138415272 to 138415418 146 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 242
Gm30751 7 138486659 to 138608418 121759 - lncRNA gene predicted gene, 30751
4930543N07Rik 7 138554242 to 138566994 12752 + lincRNA gene RIKEN cDNA 4930543N07 gene
Tssr69683 7 138555222 to 138555225 3 + TSS region transcription start site region 69683
2900001A22Rik 7 138561884 to 138562294 410 unclassified gene RIKEN cDNA 2900001A22 gene
Gm30808 7 138700975 to 138703253 2278 + lincRNA gene predicted gene, 30808
Gm30874 7 138733527 to 138828897 95370 - lncRNA gene predicted gene, 30874
D7Mit292 7 138750928 to 138751043 115 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 292
Gm45506 7 138820745 to 138821024 279 + pseudogene predicted gene 45506
Cpgi19865 7 138829543 to 138829892 349 CpG island CpG island 19865
Cpgi19866 7 138830154 to 138830581 427 CpG island CpG island 19866
Tssr69684 7 138834901 to 138834902 1 + TSS region transcription start site region 69684
Mapk1ip1 7 138835818 to 138846267 10449 - protein coding gene mitogen-activated protein kinase 1 interacting protein 1
Cpgi19867 7 138845675 to 138847616 1941 CpG island CpG island 19867
Tssr75432 7 138846110 to 138846131 21 - TSS region transcription start site region 75432
Tssr75433 7 138846167 to 138846199 32 - TSS region transcription start site region 75433
Tssr75434 7 138846202 to 138846293 91 - TSS region transcription start site region 75434
Tssr69685 7 138846335 to 138846371 36 + TSS region transcription start site region 69685
Tssr69686 7 138846381 to 138846429 48 + TSS region transcription start site region 69686
Ppp2r2d 7 138846384 to 138883057 36673 + protein coding gene protein phosphatase 2, regulatory subunit B, delta
Tssr69687 7 138846579 to 138846623 44 + TSS region transcription start site region 69687
Tssr69688 7 138846634 to 138846660 26 + TSS region transcription start site region 69688
Tssr69689 7 138848476 to 138848490 14 + TSS region transcription start site region 69689
Tssr69690 7 138848510 to 138848533 23 + TSS region transcription start site region 69690
Tssr75435 7 138850032 to 138850057 25 - TSS region transcription start site region 75435
6030427F01Rik 7 138884286 to 138885980 1694 unclassified gene RIKEN cDNA 6030427F01 gene
Tssr75436 7 138885977 to 138885982 5 - TSS region transcription start site region 75436
Bnip3 7 138890836 to 138909506 18670 - protein coding gene BCL2/adenovirus E1B interacting protein 3
Gm45507 7 138890964 to 138894675 3711 + antisense lncRNA gene predicted gene 45507
Gm18258 7 138899388 to 138900239 851 + pseudogene predicted gene, 18258
Cpgi19868 7 138909091 to 138910056 965 CpG island CpG island 19868
Tssr75437 7 138909422 to 138909431 9 - TSS region transcription start site region 75437
Tssr75438 7 138909448 to 138909491 43 - TSS region transcription start site region 75438
Tssr75439 7 138909492 to 138909513 21 - TSS region transcription start site region 75439
Gm9358 7 138914388 to 138915314 926 + pseudogene predicted gene 9358
Cpgi19869 7 138919478 to 138919925 447 CpG island CpG island 19869
Gm45668 7 138929724 to 138930216 492 - pseudogene predicted gene 45668
Cpgi19870 7 138939355 to 138939510 155 CpG island CpG island 19870
Cpgi19871 7 138940302 to 138941729 1427 CpG island CpG island 19871
Tssr69691 7 138940363 to 138940396 33 + TSS region transcription start site region 69691
Tssr69692 7 138940717 to 138940744 27 + TSS region transcription start site region 69692
Jakmip3 7 138940730 to 139083976 143246 + protein coding gene janus kinase and microtubule interacting protein 3
Gm45613 7 139019160 to 139020999 1839 - antisense lncRNA gene predicted gene 45613
Cpgi19872 7 139020872 to 139021274 402 CpG island CpG island 19872
Tssr75440 7 139020943 to 139020957 14 - TSS region transcription start site region 75440
Tssr2439 7 139070516 to 139070517 1 + TSS region transcription start site region 2439
Cpgi19873 7 139085573 to 139086909 1336 CpG island CpG island 19873
Dpysl4 7 139085981 to 139101795 15814 + protein coding gene dihydropyrimidinase-like 4
Tssr69693 7 139085984 to 139086048 64 + TSS region transcription start site region 69693
Tssr69694 7 139086259 to 139086275 16 + TSS region transcription start site region 69694
Tssr69695 7 139096323 to 139096327 4 + TSS region transcription start site region 69695
Stk32c 7 139103638 to 139213307 109669 - protein coding gene serine/threonine kinase 32C
Cpgi19874 7 139187435 to 139188943 1508 CpG island CpG island 19874
Tssr75441 7 139188462 to 139188535 73 - TSS region transcription start site region 75441
Gm27975 7 139199196 to 139199296 100 - snRNA gene predicted gene, 27975
Gm45328 7 139212275 to 139213191 916 - unclassified gene predicted gene 45328
Cpgi19875 7 139212864 to 139213578 714 CpG island CpG island 19875
Tssr69696 7 139212974 to 139212993 19 + TSS region transcription start site region 69696
Lrrc27 7 139212988 to 139242979 29991 + protein coding gene leucine rich repeat containing 27
Tssr69697 7 139213003 to 139213016 13 + TSS region transcription start site region 69697
Tssr69698 7 139213239 to 139213304 65 + TSS region transcription start site region 69698
Tssr69699 7 139213309 to 139213320 11 + TSS region transcription start site region 69699
Tssr69700 7 139213380 to 139213411 31 + TSS region transcription start site region 69700
Tssr69701 7 139213493 to 139213512 19 + TSS region transcription start site region 69701
Tssr69702 7 139214661 to 139214681 20 + TSS region transcription start site region 69702
Tssr69703 7 139214683 to 139214709 26 + TSS region transcription start site region 69703
Tssr69704 7 139214710 to 139214722 12 + TSS region transcription start site region 69704
Tssr69705 7 139214723 to 139214733 10 + TSS region transcription start site region 69705
Tssr69706 7 139220574 to 139220619 45 + TSS region transcription start site region 69706
Tssr2440 7 139224849 to 139224860 11 - TSS region transcription start site region 2440
Tssr69707 7 139224976 to 139224985 9 + TSS region transcription start site region 69707